DESCRIPTION

Package: geneBodyCoverage
Type: Package
Title: Compute transcript coverage from RNA-Seq data
Version: 0.1.0
Author: Alexis Weinreb
Maintainer: Alexis Weinreb <alexis.weinreb@yale.edu>
Description: Given gene annotations and RNA-Seq BAM files, compute
    the number of reads that fall at any given position in each transcript.
    This allows to detect 3' bias or 5'bias, and determine whether the coverage is
    uniform.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Suggests: 
    GenomeInfoDb,
    furrr,
    Rsamtools,
    testthat (>= 3.0.0),
    future
Config/testthat/edition: 3
URL: https://github.com/AlexWeinreb/geneBodyCoverage
BugReports: https://github.com/AlexWeinreb/geneBodyCoverage/issues
Imports: 
    BiocGenerics,
    dplyr,
    GenomicAlignments,
    GenomicRanges,
    getopt,
    IRanges,
    methods,
    purrr,
    readr,
    S4Vectors,
    tidyr
RoxygenNote: 7.2.2