diff --git a/DESCRIPTION b/DESCRIPTION index 5a7fae5..bc7f146 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -7,7 +7,7 @@ Description: Work with the Ecological Community Data Design Pattern. 'ecocomDP' repositories, and with methods that keep the derived data up-to-date as the underlying sources change. Described in O'Brien et al. (2021), . -Version: 1.3.1 +Version: 1.3.2 Authors@R: c(person(given = "Colin", family = "Smith", diff --git a/NEWS.md b/NEWS.md index 71e67b6..2f54a49 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,3 +1,8 @@ +# ecocomDP 1.3.2 + +## Fixes +* Improved ping_edi() function to gracefully handle network errors and disabled network-dependent tests to align with CRAN policies and prevent CRAN check issues. See issue [#154](https://github.com/EDIorg/ecocomDP/issues/154). + # ecocomDP 1.3.1 ## Fixes diff --git a/codemeta.json b/codemeta.json index b5a3d64..19843f4 100644 --- a/codemeta.json +++ b/codemeta.json @@ -7,7 +7,7 @@ "codeRepository": "https://github.com/EDIorg/ecocomDP", "issueTracker": "https://github.com/EDIorg/ecocomDP/issues", "license": "https://spdx.org/licenses/MIT", - "version": "1.3.1", + "version": "1.3.2", "programmingLanguage": { "@type": "ComputerLanguage", "name": "R", @@ -533,5 +533,5 @@ }, "SystemRequirements": null }, - "fileSize": "2681.293KB" + "fileSize": "2681.67KB" } diff --git a/cran-comments.md b/cran-comments.md index 289566b..866fbca 100644 --- a/cran-comments.md +++ b/cran-comments.md @@ -1,59 +1,36 @@ ## Revision -This release fixes data mapping issues and improves plotting functions. +This release fixes failing CRAN checks due to network issues. ## Test environments -* x86_64-w64-mingw32 (64-bit), (win-builder), R 4.2.3 (2023-03-15 ucrt) -* x86_64-w64-mingw32 (64-bit), (win-builder), R 4.3.2 (2023-10-31 ucrt) -* x86_64-w64-mingw32 (64-bit), (win-builder), R-dev (2024-02-15 r85925 ucrt) -* x86_64-w64-mingw32 (R-hub), R 4.3.2 (2023-10-31 ucrt) -* x86_64-w64-mingw32 (R-hub), R-devel (2023-11-18 r85554 ucrt) -* aarch64-apple-darwin20, (local machine), R 4.3.0 -* x86_64-pc-linux-gnu Debian (R-hub), R 4.3.2 (2023-10-31) -* x86_64-pc-linux-gnu Ubuntu (R-hub), 4.3.2 (2023-10-31) -* x86_64-pc-linux-gnu Ubuntu (R-hub), R-devel (2023-12-26 r85738) -* x86_64-pc-linux-gnu Fedora (R-hub), R-devel (2023-12-26 r85738) +* x86_64-w64-mingw32 (64-bit), (win-builder), R version 4.4.1 (2024-06-14 ucrt) +* x86_64-w64-mingw32 (64-bit), (win-builder), R version 4.3.3 (2024-02-29 ucrt) +* x86_64-w64-mingw32 (64-bit), (win-builder), R Under development (unstable) (2024-08-15 r87022 ucrt) +* x86_64-pc-linux-gnu (R-hub), R Under development (unstable) (2024-08-15 r87022) +* x86_64-pc-linux-gnu (R-hub), R version 4.4.1 Patched (2024-08-14 r87022) +* x86_64-pc-linux-gnu (R-hub), R version 4.4.1 (2024-06-14) +* x86_64-w64-mingw32 (R-hub), R Under development (unstable) (2024-08-15 r87022 ucrt) +* aarch64-apple-darwin20 (R-hub), R Under development (unstable) (2024-08-05 r86980) ## R CMD check results -0 ERROR | 0 WARNINGS | 4 NOTES - -* checking for non-standard things in the check directory ... NOTE -Found the following files/directories: - ''NULL'' - -This note appears to be an issue with the R-hub platform. This note occurs on: -* x86_64-w64-mingw32 (R-hub), R-devel (2023-11-18 r85554 ucrt) -* x86_64-w64-mingw32 (R-hub), R 4.3.2 (2023-10-31 ucrt) -For more information see [here](https://github.com/r-hub/rhub/issues/560). - -* checking for detritus in the temp directory ... NOTE -Found the following files/directories: - 'lastMiKTeXException' - -This note is a recognized bug on R-hub test platforms. This note occurs on: -* x86_64-w64-mingw32 (R-hub), R-devel (2023-11-18 r85554 ucrt) -* x86_64-w64-mingw32 (R-hub), R 4.3.2 (2023-10-31 ucrt) -For more information see [here](https://community.rstudio.com/t/prep-error-during-rhub-check-for-cran/159467). - -* checking HTML version of manual ... NOTE -Skipping checking HTML validation: no command 'tidy' found - -This note appears to be an issue with the R-hub test platform. This note occurs on: -* x86_64-pc-linux-gnu Fedora (R-hub), R-devel (2023-12-26 r85738) -* x86_64-pc-linux-gnu Ubuntu (R-hub), R-devel (2023-12-26 r85738) -* x86_64-pc-linux-gnu Ubuntu (R-hub), 4.3.2 (2023-10-31) -For more information see [here](https://stackoverflow.com/questions/74857062/rhub-cran-check-keeps-giving-html-note-on-fedora-test-no-command-tidy-found). - -* checking examples ... [25s/55s] NOTE -Examples with CPU (user + system) or elapsed time > 5s -user system elapsed -plot_sites 3.198 0.110 7.257 -plot_taxa_abund 3.182 0.013 7.063 - -This note indicates a couple plotting functions are taking a little more time than is optimal. We think the overage time is acceptable since it is on the order of seconds. This note occurs on: -* x86_64-pc-linux-gnu Fedora (R-hub), R-devel (2023-12-26 r85738) -* x86_64-pc-linux-gnu Debian (R-hub), R 4.3.2 (2023-10-31) -* x86_64-pc-linux-gnu Ubuntu (R-hub), R-devel (2023-12-26 r85738) -* x86_64-pc-linux-gnu Ubuntu (R-hub), 4.3.2 (2023-10-31) +0 ERROR | 0 WARNINGS | 1 NOTES + +* checking CRAN incoming feasibility ... [22s] NOTE + Maintainer: 'Colin Smith ' + + Found the following (possibly) invalid URLs: + URL: https://github.com/EDIorg/ecocomDP/commit/f2bdb91a4e1a3b633ebed3bffbf1773ac8565e80 + From: NEWS.md + Status: 406 + Message: Not Acceptable + URL: https://www.itis.gov/ + From: man/create_eml.Rd + man/create_taxon.Rd + inst/doc/shared_practices_create.html + Status: 404 + Message: Not Found + + These URLs are valid and working. The first URL is a commit to the ecocomDP repository on GitHub. + The second URL is the Integrated Taxonomic Information System (ITIS) website. This note occurs on: ## Downstream dependencies There are currently no downstream dependencies for this package.