From 46a35731d83a66dce9bed5a78b86421e2654057b Mon Sep 17 00:00:00 2001 From: ESapenaVentura Date: Thu, 1 Dec 2022 21:33:40 +0000 Subject: [PATCH] testing knitting root dir --- lrgasp_metrics/utilities/SQANTI3_Evaluation_run.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/lrgasp_metrics/utilities/SQANTI3_Evaluation_run.R b/lrgasp_metrics/utilities/SQANTI3_Evaluation_run.R index 6df27ea..076331a 100755 --- a/lrgasp_metrics/utilities/SQANTI3_Evaluation_run.R +++ b/lrgasp_metrics/utilities/SQANTI3_Evaluation_run.R @@ -63,6 +63,6 @@ rmarkdown::render(RMD, params = list( output.directory = rdata, Name = name, Platform = platform ), output_file = report.file, - knit_root_dir = "/app/results" + knit_root_dir = "../results/" )