diff --git a/src/diverse_seq/cluster.py b/src/diverse_seq/cluster.py index 04d6f92..e8db8c2 100644 --- a/src/diverse_seq/cluster.py +++ b/src/diverse_seq/cluster.py @@ -241,10 +241,7 @@ def make_cluster_tree( @define_app(app_type=AppType.NON_COMPOSABLE) class dvs_par_ctree(ClusterTreeBase): - """Create a cluster tree from kmer distances. - - If numprocs>1, computations are performed in parallel. - """ + """Create a cluster tree from kmer distances in parallel.""" def __init__( self, @@ -262,8 +259,6 @@ def __init__( Parameters ---------- - seq_store - path to sequence store k kmer size sketch_size @@ -281,6 +276,9 @@ def __init__( Notes ----- + This is app is not composable but can run in parallel. It is + best suited to a single large sequence collection. + If mash_canonical_kmers is enabled when using the mash distance, kmers are considered identical to their reverse complement.