From a3d54b7426284fe3d06534c923ba8d78b31682fb Mon Sep 17 00:00:00 2001 From: xavier Date: Thu, 11 May 2017 16:00:21 +0200 Subject: [PATCH 01/13] Add ontology tree d3 --- datasets/views.py | 6 ++ freesound_datasets/urls.py | 1 + templates/base.html | 2 + templates/ontology_tree.html | 169 +++++++++++++++++++++++++++++++++++ 4 files changed, 178 insertions(+) create mode 100644 templates/ontology_tree.html diff --git a/datasets/views.py b/datasets/views.py index 5acf7651..528da76a 100644 --- a/datasets/views.py +++ b/datasets/views.py @@ -22,6 +22,7 @@ from utils.async_tasks import data_from_async_task import os import random +import json ####################### @@ -98,6 +99,11 @@ def taxonomy_node(request, short_name, node_id): return render(request, 'taxonomy_node.html', {'dataset': dataset, 'node': node}) +def ontology_tree(request, short_name): + dataset = get_object_or_404(Dataset, short_name=short_name) + ontology = json.load(open('ontology_html5.json', encoding='utf-8')) + return render(request, 'ontology_tree.html', {'dataset': dataset, 'ontology':json.dumps(ontology)}) + ############################# # CONTRIBUTE TO DATASET VIEWS ############################# diff --git a/freesound_datasets/urls.py b/freesound_datasets/urls.py index 23ca5e9f..d8bfee9e 100644 --- a/freesound_datasets/urls.py +++ b/freesound_datasets/urls.py @@ -28,6 +28,7 @@ url(r'^(?P[^\/]+)/contribute/$', contribute, name='contribute'), url(r'^(?P[^\/]+)/contribute/validate_annotations/$', contribute_validate_annotations, name='contribute-validate-annotations'), url(r'^(?P[^\/]+)/contribute/validate_annotations/(?P[^\/]+)/$', contribute_validate_annotations_category, name='contribute-validate-annotations-category'), + url(r'^(?P[^\/]+)/tree/$', ontology_tree, name='exploration-tree'), ] if settings.DEBUG: diff --git a/templates/base.html b/templates/base.html index bcd76e1c..fb52a814 100644 --- a/templates/base.html +++ b/templates/base.html @@ -16,6 +16,7 @@ + {% block extra_head %} {% endblock extra_head%} @@ -38,6 +39,7 @@ {% else %} Download {% endif %} + Ontology {% endif %}
{% if request.user.is_authenticated %} diff --git a/templates/ontology_tree.html b/templates/ontology_tree.html new file mode 100644 index 00000000..783b0f2a --- /dev/null +++ b/templates/ontology_tree.html @@ -0,0 +1,169 @@ +{% extends "base.html" %} +{% load staticfiles %} +{% load humanize %} +{% block title %} AudioSet Ontology - Tree visualization {% endblock title %} + + +{% block content %} + + + + AudioSet Ontology - Tree visualization +
+ Expandable nodes have its name category in the left. +
+ Color code:     abstract - + both - + blacklist +
+ +
+{% endblock %} + +{% block page_js %} + +{% endblock %} + From a3464a449a6010dd229a89911784469d778b684e Mon Sep 17 00:00:00 2001 From: xavier Date: Thu, 11 May 2017 18:25:36 +0200 Subject: [PATCH 02/13] Add tab, Place tree in about page --- datasets/views.py | 9 +++------ freesound_datasets/urls.py | 1 - static/js/d3.v3.min.js | 5 +++++ templates/base.html | 1 - templates/dataset.html | 38 +++++++++++++++++++++++++++++++++++- templates/ontology_tree.html | 10 ++-------- 6 files changed, 47 insertions(+), 17 deletions(-) create mode 100644 static/js/d3.v3.min.js diff --git a/datasets/views.py b/datasets/views.py index 528da76a..ab2fb2f0 100644 --- a/datasets/views.py +++ b/datasets/views.py @@ -46,10 +46,13 @@ def dataset(request, short_name): else: form = DatasetReleaseForm() + ontology = json.load(open('ontology_html5.json', encoding='utf-8')) + return render(request, 'dataset.html', { 'dataset': dataset, 'user_is_maintainer': user_is_maintainer, 'dataset_release_form': form, 'dataset_release_form_errors': form_errors, + 'ontology': json.dumps(ontology), }) @@ -98,12 +101,6 @@ def taxonomy_node(request, short_name, node_id): node = dataset.taxonomy.get_element_at_id(node_id) return render(request, 'taxonomy_node.html', {'dataset': dataset, 'node': node}) - -def ontology_tree(request, short_name): - dataset = get_object_or_404(Dataset, short_name=short_name) - ontology = json.load(open('ontology_html5.json', encoding='utf-8')) - return render(request, 'ontology_tree.html', {'dataset': dataset, 'ontology':json.dumps(ontology)}) - ############################# # CONTRIBUTE TO DATASET VIEWS ############################# diff --git a/freesound_datasets/urls.py b/freesound_datasets/urls.py index d8bfee9e..23ca5e9f 100644 --- a/freesound_datasets/urls.py +++ b/freesound_datasets/urls.py @@ -28,7 +28,6 @@ url(r'^(?P[^\/]+)/contribute/$', contribute, name='contribute'), url(r'^(?P[^\/]+)/contribute/validate_annotations/$', contribute_validate_annotations, name='contribute-validate-annotations'), url(r'^(?P[^\/]+)/contribute/validate_annotations/(?P[^\/]+)/$', contribute_validate_annotations_category, name='contribute-validate-annotations-category'), - url(r'^(?P[^\/]+)/tree/$', ontology_tree, name='exploration-tree'), ] if settings.DEBUG: diff --git a/static/js/d3.v3.min.js b/static/js/d3.v3.min.js new file mode 100644 index 00000000..c82d4906 --- /dev/null +++ b/static/js/d3.v3.min.js @@ -0,0 +1,5 @@ +!function(){function n(n){return n&&(n.ownerDocument||n.document||n).documentElement}function t(n){return n&&(n.ownerDocument&&n.ownerDocument.defaultView||n.document&&n||n.defaultView)}function e(n,t){return t>n?-1:n>t?1:n>=t?0:NaN}function r(n){return null===n?NaN:+n}function i(n){return!isNaN(n)}function u(n){return{left:function(t,e,r,i){for(arguments.length<3&&(r=0),arguments.length<4&&(i=t.length);i>r;){var u=r+i>>>1;n(t[u],e)<0?r=u+1:i=u}return 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%} Download {% endif %} - Ontology {% endif %}
{% if request.user.is_authenticated %} diff --git a/templates/dataset.html b/templates/dataset.html index 8a36906f..fc08a82c 100644 --- a/templates/dataset.html +++ b/templates/dataset.html @@ -84,6 +84,30 @@ } } + + + {% endblock %} {% block content %}

About the {{ dataset.name }}

@@ -111,7 +135,19 @@

About the {{ dataset.name }}

{% endif %}

Taxonomy categories

-
+ +
+ + Content + + + Tree + +
+ + +
Loading data...
+ {% include "ontology_tree.html" %} {% endblock %} diff --git a/templates/ontology_tree.html b/templates/ontology_tree.html index 783b0f2a..50cae051 100644 --- a/templates/ontology_tree.html +++ b/templates/ontology_tree.html @@ -1,9 +1,3 @@ -{% extends "base.html" %} -{% load staticfiles %} -{% load humanize %} -{% block title %} AudioSet Ontology - Tree visualization {% endblock title %} - - {% block content %} - - AudioSet Ontology - Tree visualization + {% endblock %} {% block page_js %} From 03ad54a46c67358231b44fc7d9919ab681791d12 Mon Sep 17 00:00:00 2001 From: xavier Date: Thu, 11 May 2017 20:01:01 +0200 Subject: [PATCH 03/13] Add preprocessing ontology in models --- datasets/models.py | 28 ++++++++++++++++++++++++++++ datasets/views.py | 5 ++--- 2 files changed, 30 insertions(+), 3 deletions(-) diff --git a/datasets/models.py b/datasets/models.py index a08eaf1d..1c25da37 100644 --- a/datasets/models.py +++ b/datasets/models.py @@ -56,6 +56,34 @@ def paths(node_id, cur=list()): return hierarchy_paths + def get_dict_tree(self): + def get_all_children(node_id): + children = self.get_children(node_id) + children_names = [] + for child in children: + child_name = {} + child_name["name"] = child["name"] + child_name["mark"] = child["restrictions"] + if "child_ids" in child: + child_name["children"] = get_all_children(child["id"]) + children_names.append(child_name) + if children_names: + return children_names + + taxonomy = self.taxonomy + higher_categories = [node for node in taxonomy + if "parent_ids" not in taxonomy[node]] + output_dict = {} + output_dict["name"] = "Ontology" + output_dict["children"] = [] + for node_id in higher_categories: + dict_level1 = {} + dict_level1["name"] = taxonomy[node_id]["name"] + dict_level1["mark"] = taxonomy[node_id]["restrictions"] + dict_level1["children"] = get_all_children(node_id) + output_dict["children"].append(dict_level1) + return output_dict + class Sound(models.Model): created_at = models.DateTimeField(auto_now_add=True) diff --git a/datasets/views.py b/datasets/views.py index ab2fb2f0..bbfc3cb9 100644 --- a/datasets/views.py +++ b/datasets/views.py @@ -33,6 +33,7 @@ def dataset(request, short_name): dataset = get_object_or_404(Dataset, short_name=short_name) user_is_maintainer = dataset.user_is_maintainer(request.user) form_errors = False + ontology = dataset.taxonomy.get_dict_tree() if request.method == 'POST': form = DatasetReleaseForm(request.POST) if form.is_valid(): @@ -45,9 +46,7 @@ def dataset(request, short_name): form_errors = True else: form = DatasetReleaseForm() - - ontology = json.load(open('ontology_html5.json', encoding='utf-8')) - + return render(request, 'dataset.html', { 'dataset': dataset, 'user_is_maintainer': user_is_maintainer, From da13d6184f2722cf25ca096467395039935713bf Mon Sep 17 00:00:00 2001 From: xavier Date: Fri, 12 May 2017 12:09:40 +0200 Subject: [PATCH 04/13] Change style tree --- templates/ontology_tree.html | 8 +++++++- 1 file changed, 7 insertions(+), 1 deletion(-) diff --git a/templates/ontology_tree.html b/templates/ontology_tree.html index 50cae051..81056cfb 100644 --- a/templates/ontology_tree.html +++ b/templates/ontology_tree.html @@ -17,7 +17,13 @@ stroke: #ccc; stroke-width: 1.5px; } +#ontology_placeholder { + overflow-x: scroll; + width: 100%; + background-color: #FAFAFA; +} + {% endblock %} From 3deaabe81d3a2adde8d7ed83327ea2b1415deed2 Mon Sep 17 00:00:00 2001 From: xavier Date: Fri, 12 May 2017 14:50:56 +0200 Subject: [PATCH 05/13] Clean code get_dict_tree --- datasets/models.py | 20 +++++++++----------- 1 file changed, 9 insertions(+), 11 deletions(-) diff --git a/datasets/models.py b/datasets/models.py index 1c25da37..63e31e60 100644 --- a/datasets/models.py +++ b/datasets/models.py @@ -57,19 +57,18 @@ def paths(node_id, cur=list()): return hierarchy_paths def get_dict_tree(self): + keys = [("name", "name"), ("mark", "restrictions")] def get_all_children(node_id): + # recursive function for adding children in dict children = self.get_children(node_id) children_names = [] for child in children: - child_name = {} - child_name["name"] = child["name"] - child_name["mark"] = child["restrictions"] - if "child_ids" in child: - child_name["children"] = get_all_children(child["id"]) + child_name = {key[0]:child[key[1]] for key in keys} + child_name["children"] = get_all_children(child["id"]) children_names.append(child_name) if children_names: return children_names - + taxonomy = self.taxonomy higher_categories = [node for node in taxonomy if "parent_ids" not in taxonomy[node]] @@ -77,11 +76,10 @@ def get_all_children(node_id): output_dict["name"] = "Ontology" output_dict["children"] = [] for node_id in higher_categories: - dict_level1 = {} - dict_level1["name"] = taxonomy[node_id]["name"] - dict_level1["mark"] = taxonomy[node_id]["restrictions"] - dict_level1["children"] = get_all_children(node_id) - output_dict["children"].append(dict_level1) + dict_level = {key[0]:taxonomy[node_id][key[1]] for key in keys} + dict_level["children"] = get_all_children(node_id) + output_dict["children"].append(dict_level) + return output_dict From dc939b2dba41732a38c8f803ccf05a0f5fa24506 Mon Sep 17 00:00:00 2001 From: xavier Date: Fri, 12 May 2017 14:54:11 +0200 Subject: [PATCH 06/13] Clean code get_dict_tree --- datasets/models.py | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/datasets/models.py b/datasets/models.py index 63e31e60..b51f8d85 100644 --- a/datasets/models.py +++ b/datasets/models.py @@ -72,9 +72,7 @@ def get_all_children(node_id): taxonomy = self.taxonomy higher_categories = [node for node in taxonomy if "parent_ids" not in taxonomy[node]] - output_dict = {} - output_dict["name"] = "Ontology" - output_dict["children"] = [] + output_dict = {"name":"Ontology", "children":[]} for node_id in higher_categories: dict_level = {key[0]:taxonomy[node_id][key[1]] for key in keys} dict_level["children"] = get_all_children(node_id) From adcb230c9c982f73f7d081519ad48f767d924555 Mon Sep 17 00:00:00 2001 From: xavierfav Date: Mon, 29 May 2017 12:37:11 +0200 Subject: [PATCH 07/13] Change name variable function --- datasets/models.py | 5 ++++- datasets/views.py | 4 ++-- 2 files changed, 6 insertions(+), 3 deletions(-) diff --git a/datasets/models.py b/datasets/models.py index b51f8d85..35aa5bc3 100644 --- a/datasets/models.py +++ b/datasets/models.py @@ -56,7 +56,10 @@ def paths(node_id, cur=list()): return hierarchy_paths - def get_dict_tree(self): + def get_taxonomy_as_tree(self): + """ + Returns a dictionary for the tree visualization + """ keys = [("name", "name"), ("mark", "restrictions")] def get_all_children(node_id): # recursive function for adding children in dict diff --git a/datasets/views.py b/datasets/views.py index bbfc3cb9..1c3b31e9 100644 --- a/datasets/views.py +++ b/datasets/views.py @@ -33,7 +33,7 @@ def dataset(request, short_name): dataset = get_object_or_404(Dataset, short_name=short_name) user_is_maintainer = dataset.user_is_maintainer(request.user) form_errors = False - ontology = dataset.taxonomy.get_dict_tree() + taxonomy_tree = dataset.taxonomy.get_taxonomy_as_tree() if request.method == 'POST': form = DatasetReleaseForm(request.POST) if form.is_valid(): @@ -51,7 +51,7 @@ def dataset(request, short_name): 'dataset': dataset, 'user_is_maintainer': user_is_maintainer, 'dataset_release_form': form, 'dataset_release_form_errors': form_errors, - 'ontology': json.dumps(ontology), + 'ontology': json.dumps(taxonomy_tree), }) From ab204a3993ffa26b8fab61e67f549a6e419202f3 Mon Sep 17 00:00:00 2001 From: xavierfav Date: Mon, 29 May 2017 12:50:20 +0200 Subject: [PATCH 08/13] Add active by default --- templates/dataset.html | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/templates/dataset.html b/templates/dataset.html index fc08a82c..010fdb30 100644 --- a/templates/dataset.html +++ b/templates/dataset.html @@ -96,7 +96,7 @@ tabcontent[i].style.display = "none"; } - // Get all elements with class="tablinks" and remove the class "active" + // Get all elements with class="item" and remove the class "active" tablinks = document.getElementsByClassName("item"); for (i = 0; i < tablinks.length; i++) { tablinks[i].className = tablinks[i].className.replace(" active", ""); @@ -137,7 +137,7 @@

About the {{ dataset.name }}

Taxonomy categories

- + Content From fe83116ec056320ec8060eedccfc606041dbd3a7 Mon Sep 17 00:00:00 2001 From: xavierfav Date: Mon, 29 May 2017 12:51:35 +0200 Subject: [PATCH 09/13] Change name Content to Table --- templates/dataset.html | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/templates/dataset.html b/templates/dataset.html index 010fdb30..d5d8ea33 100644 --- a/templates/dataset.html +++ b/templates/dataset.html @@ -138,7 +138,7 @@

Taxonomy categories

- Content + Table Tree From 886607c4eb0298574997d0ba272292fc26c94575 Mon Sep 17 00:00:00 2001 From: xavierfav Date: Mon, 29 May 2017 12:54:01 +0200 Subject: [PATCH 10/13] Move style to css file --- static/css/main.css | 24 ++++++++++++++++++++++++ templates/ontology_tree.html | 25 ------------------------- 2 files changed, 24 insertions(+), 25 deletions(-) diff --git a/static/css/main.css b/static/css/main.css index 5f90931b..16ede69c 100644 --- a/static/css/main.css +++ b/static/css/main.css @@ -114,3 +114,27 @@ ul { display: inline-block; color: white; } + +/* CSS FOR TREE VISUALISATION */ +.node { + cursor: pointer; +} +.node circle { + fill: #fff; + stroke: steelblue; + stroke-width: 1.5px; +} +.node text { + font: 10px sans-serif; +} +.link { + fill: none; + stroke: #ccc; + stroke-width: 1.5px; +} +#ontology_placeholder { + overflow-x: scroll; + width: 100%; + background-color: #FAFAFA; +} + diff --git a/templates/ontology_tree.html b/templates/ontology_tree.html index 81056cfb..a0f8a0ac 100644 --- a/templates/ontology_tree.html +++ b/templates/ontology_tree.html @@ -1,29 +1,4 @@ {% block content %} - - -