From fc95382002ba53a41c8d3cb85a4d4b6df835e005 Mon Sep 17 00:00:00 2001 From: Magnus Wahlberg Date: Thu, 16 May 2024 16:18:18 +0200 Subject: [PATCH] Update smoke-tests.yml --- .github/workflows/smoke-tests.yml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/smoke-tests.yml b/.github/workflows/smoke-tests.yml index 9163759c..f83f0e82 100644 --- a/.github/workflows/smoke-tests.yml +++ b/.github/workflows/smoke-tests.yml @@ -6,11 +6,11 @@ jobs: Smoke-RunTraining: uses: ./.github/workflows/run-pipeline.yml with: - environment_file: ${{ github.workspace }}/deeprvat_env_no_gpu.yml + environment_file: ./deeprvat_env_no_gpu.yml name: Smoke-RunTraining pipeline_cmd: | - python -m snakemake -n -j 2 --directory ${{ github.workspace }}/example \ - --snakefile ${{ github.workspace }}/pipelines/run_training.snakefile --show-failed-logs + python -m snakemake -n -j 2 --directory ./example \ + --snakefile ./pipelines/run_training.snakefile --show-failed-logs # Pipeline-Tests-RunTraining: