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DESCRIPTION
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Type: project
Title: Exploring Natural Range of Variation in the Western Boreal Forest
Version: 3.0.0
Authors@R: c(
person("Eliot J B", "McIntire", , "eliot.mcintire@nrcan-rncan.gc.ca", role = "aut",
comment = c(ORCID = "0000-0002-6914-8316")),
person("Alex M", "Chubaty", , "achubaty@for-cast.ca", role = c("aut", "cre"),
comment = c(ORCID = "0000-0001-7146-8135"))
)
Description: The LandWeb model integrates two well-used models for forest
stand succession and fire simulation, implemented in the SpaDES
simulation platform (Chubaty & McIntire, 2022). Vegetation dynamics
are modeled using an implementation of the LANDIS-II Biomass
Succession model (Scheller & Mladenoff, 2004; Scheller et al., 2007).
Fire dynamics are modeled using an implementation of LandMine
(Andison, 1996). Simulations were run for the entire LandWeb study
area, which spans most of the western Canadian boreal forest. Input
data were derived from several publically available remote-sensed
datasets (Beaudoin et al., 2014), as well as proprietary data complied
by Pickell et al. (2016). Simulation outputs consist of maps showing
the time since fire as well as histogram summaries of 1) number of
large patches (i.e., patches above the number of hectares specified by
the user) contained within the selected spatial area; and 2) the
vegetation cover within the selected spatial area. Histograms are
provided for each spatial area by polygon, age class, and species.
Simulation outputs are summarized for several forestry management
areas/units.
License: GPL-3
Depends:
R (== 4.2)
Imports:
abind (== 1.4-5),
amc (== 0.2.1),
animation (== 2.7),
archive (== 1.1.5),
arm (== 1.13-1),
askpass (== 1.1),
assertthat (== 0.2.1),
backports (== 1.4.1),
base64enc (== 0.1-3),
BH (== 1.81.0-1),
bibtex (== 0.5.1),
bit (== 4.0.5),
bit64 (== 4.0.5),
bitops (== 1.0-7),
blme (== 1.0-5),
blob (== 1.2.3),
bookdown (== 0.34),
brew (== 1.0-8),
brio (== 1.1.3),
broom (== 1.0.3),
broom.mixed (== 0.2.9.4),
bslib (== 0.4.2),
cachem (== 1.0.7),
callr (== 3.7.3),
car (== 3.1-1),
carData (== 3.0-5),
checkmate (== 2.1.0),
CircStats (== 0.2-6),
classInt (== 0.4-8),
cli (== 3.6.0),
clipr (== 0.8.0),
coda (== 0.19-4),
colorspace (== 2.1-0),
commonmark (== 1.8.1),
corrplot (== 0.92),
cowplot (== 1.1.1),
cpp11 (== 0.4.3),
crayon (== 1.5.2),
credentials (== 1.3.2),
crosstalk (== 1.2.0),
curl (== 5.0.0),
data.table (== 1.14.8),
DBI (== 1.1.3),
deldir (== 1.0-6),
desc (== 1.4.2),
details (== 0.3.0),
diffobj (== 0.3.5),
digest (== 0.6.31),
dismo (== 1.3-9),
downlit (== 0.4.3),
dplyr (== 1.1.0),
DT (== 0.28),
e1071 (== 1.7-13),
ellipsis (== 0.3.2),
EnvStats (== 2.7.0),
evaluate (== 0.20),
exactextractr (== 0.9.1),
fansi (== 1.0.4),
farver (== 2.1.1),
fastdigest (== 0.6-3),
fasterize (== 1.0.4),
fastmap (== 1.1.1),
fastmatch (== 1.1-3),
fastmatrix (== 0.4-1245),
fastshp (== 0.1-2),
FNN (== 1.1.3.1),
fontawesome (== 0.5.0),
forcats (== 1.0.0),
foreach (== 1.5.2),
formatR (== 1.14),
Formula (== 1.2-4),
fpCompare (== 0.2.4),
fs (== 1.6.1),
furrr (== 0.3.1),
future (== 1.31.0),
future.apply (== 1.10.0),
future.callr (== 0.8.1),
gargle (== 1.3.0),
gdalUtilities (== 1.2.3),
generics (== 0.1.3),
geodata (== 0.5-3),
geojsonsf (== 2.0.3),
geometries (== 0.2.0),
gert (== 1.9.2),
ggplot2 (== 3.4.1),
ggpubr (== 0.6.0),
ggrepel (== 0.9.3),
ggsci (== 2.9),
ggsignif (== 0.6.4),
ggspatial (== 1.1.7),
ggthemes (== 4.2.4),
gh (== 1.4.0),
git2r (== 0.32.0),
gitcreds (== 0.1.2),
globals (== 0.16.2),
glue (== 1.6.2),
goftest (== 1.2-3),
googledrive (== 2.0.0),
gridBase (== 0.4-7),
gridExtra (== 2.3),
gtable (== 0.3.1),
hexbin (== 1.28.2),
highr (== 0.10),
Hmisc (== 4.8-0),
hms (== 1.1.2),
htmlTable (== 2.4.1),
htmltools (== 0.5.4),
htmlwidgets (== 1.6.1),
httpuv (== 1.6.8),
httr (== 1.4.4),
httr2 (== 0.2.3),
igraph (== 1.4.0),
ini (== 0.3.1),
interp (== 1.1-3),
isoband (== 0.2.7),
iterators (== 1.0.14),
jpeg (== 0.1-10),
jquerylib (== 0.1.4),
jsonify (== 1.2.2),
jsonlite (== 1.8.4),
kableExtra (== 1.3.4),
kernlab (== 0.9-32),
knitr (== 1.42),
ks (== 1.14.0),
kSamples (== 1.2-9),
labeling (== 0.4.2),
LandR (== 1.1.0.9019),
LandR.CS (== 0.0.3),
LandWebUtils (== 0.1.5.9001),
later (== 1.3.0),
latticeExtra (== 0.6-30),
lazyeval (== 0.2.2),
leafem (== 0.2.0),
leaflet (== 2.1.1),
leaflet.providers (== 1.9.0),
leafpop (== 0.1.0),
lifecycle (== 1.0.3),
listenv (== 0.9.0),
lme4 (== 1.1-31),
lobstr (== 1.1.2),
logging (== 0.10-108),
lubridate (== 1.9.1),
lwgeom (== 0.2-11),
magick (== 2.7.3),
magrittr (== 2.0.3),
map (== 0.0.5),
maptools (== 1.1-6),
mapview (== 2.11.0),
markdown (== 1.5),
MatrixModels (== 0.5-1),
mclust (== 6.0.0),
memoise (== 2.0.1),
merTools (== 0.5.2),
mime (== 0.12),
minqa (== 1.2.5),
misc3d (== 0.9-1),
modelr (== 0.1.11),
multcomp (== 1.4-20),
multicool (== 0.1-12),
MuMIn (== 1.47.1),
munsell (== 0.5.0),
mvtnorm (== 1.1-3),
nabor (== 0.5.0),
nloptr (== 2.0.3),
nngeo (== 0.4.6),
nortest (== 1.0-4),
notifications (== 0.0.1),
numDeriv (== 2016.8-1.1),
openssl (== 2.0.5),
openxlsx (== 4.2.5.2),
pak (== 0.5.1),
pander (== 0.6.5),
parallelly (== 1.34.0),
patchwork (== 1.1.2),
pbkrtest (== 0.5.2),
pemisc (== 0.0.4.9009),
peutils (== 0.1.0),
pillar (== 1.8.1),
pkgconfig (== 2.0.3),
pkgload (== 1.3.2),
plogr (== 0.2.0),
plot3D (== 1.4),
plyr (== 1.8.8),
png (== 0.1-8),
polspline (== 1.1.22),
polyclip (== 1.10-4),
polynom (== 1.4-1),
pracma (== 2.4.2),
praise (== 1.0.0),
prettymapr (== 0.2.4),
prettyunits (== 1.1.1),
processx (== 3.8.0),
profvis (== 0.3.8),
progress (== 1.2.2),
promises (== 1.2.0.1),
proxy (== 0.4-27),
pryr (== 0.1.6),
ps (== 1.7.2),
purrr (== 1.0.1),
qs (== 0.25.4),
quantreg (== 5.94),
quickPlot (== 0.1.8.9000),
R.methodsS3 (== 1.8.2),
R.oo (== 1.25.0),
R.utils (== 2.12.2),
R6 (== 2.5.1),
RANN (== 2.6.1),
rapidjsonr (== 1.2.0),
RApiSerialize (== 0.1.2),
rappdirs (== 0.3.3),
raster (== 3.6-14),
rasterVis (== 0.51.5),
RColorBrewer (== 1.1-3),
Rcpp (== 1.0.10),
RcppArmadillo (== 0.11.4.4.0),
RcppEigen (== 0.3.3.9.3),
RcppParallel (== 5.1.6),
RCurl (== 1.98-1.10),
readr (== 2.1.3),
RefManageR (== 1.4.0),
rematch2 (== 2.1.2),
remotes (== 2.4.2),
renv (== 0.17.3),
reproducible (== 1.2.16.9024),
Require (== 0.2.6.9009),
rgdal (== 1.6-4),
rgeos (== 0.6-1),
rjson (== 0.2.21),
rlang (== 1.1.0),
rmapshaper (== 0.5.0),
rmarkdown (== 2.20),
rms (== 6.4-1),
rosm (== 0.2.6),
RPostgres (== 1.4.5),
rprojroot (== 2.0.3),
RPushbullet (== 0.3.4),
RSQLite (== 2.3.0),
rstatix (== 0.7.2),
rstudioapi (== 0.14),
rvest (== 1.0.3),
s2 (== 1.1.2),
sandwich (== 3.0-2),
sass (== 0.4.5),
satellite (== 1.0.4),
scales (== 1.2.1),
SDMTools (== 1.1-221.2),
selectr (== 0.4-2),
servr (== 0.25),
sessioninfo (== 1.2.2),
sf (== 1.0-12),
sfheaders (== 0.4.0),
shiny (== 1.7.4),
shinyBS (== 0.61.1),
shinycssloaders (== 1.0.0),
shinydashboard (== 0.7.2),
shinyjs (== 2.1.0),
slackr (== 3.2.0),
sourcetools (== 0.1.7-1),
sp (== 1.6-0),
SpaDES.config (== 0.0.2.9071),
SpaDES.core (== 1.1.1),
SpaDES.docs (== 0.0.1),
SpaDES.project (== 0.0.7.9004),
SpaDES.tools (== 1.0.2),
SparseM (== 1.81),
spatialEco (== 2.0-0),
SpatialPack (== 0.4),
spatstat.core (== 2.4-4),
spatstat.data (== 3.0-0),
spatstat.explore (== 3.0-6),
spatstat.geom (== 3.0-6),
spatstat.random (== 3.1-3),
spatstat.sparse (== 3.0-0),
spatstat.utils (== 3.0-2),
spData (== 2.2.1),
spdep (== 1.2-7),
stringfish (== 0.15.7),
stringi (== 1.7.12),
stringr (== 1.5.0),
SuppDists (== 1.1-9.7),
svglite (== 2.1.1),
sys (== 3.4.1),
systemfonts (== 1.0.4),
tensor (== 1.5),
terra (== 1.7-3),
testthat (== 3.1.6),
TH.data (== 1.1-1),
tibble (== 3.1.8),
tidyr (== 1.3.0),
tidyselect (== 1.2.0),
tiler (== 0.2.6),
timechange (== 0.2.0),
tinytex (== 0.44),
tmpdir (== 0.1.1),
tzdb (== 0.3.0),
units (== 0.8-1),
usethis (== 2.2.0),
utf8 (== 1.2.3),
uuid (== 1.1-0),
V8 (== 4.3.0),
vctrs (== 0.5.2),
VGAM (== 1.1-7),
viridis (== 0.6.2),
viridisLite (== 0.4.1),
vroom (== 1.6.1),
waldo (== 0.4.0),
webshot (== 0.5.4),
whisker (== 0.4.1),
withr (== 2.5.0),
wk (== 0.7.1),
xfun (== 0.40),
XML (== 3.99-0.13),
xml2 (== 1.3.3),
xtable (== 1.8-4),
yaImpute (== 1.0-33),
yaml (== 2.3.7),
zip (== 2.3.0),
zoo (== 1.8-11)
Remotes:
achubaty/amc@3330753132d4dca15011e4e64db5ccea28e3b8c4,
achubaty/tmpdir@b0a2faf8d00750f971964a9ead48f5051c44c4f2,
FOR-CAST/notifications@1c38b2b0190eed24ec0b0a59ac0f362a7ab8d3e9,
ianmseddy/LandR.CS@0952eedde6e100c2aae822b210756a697a04b61a,
PredictiveEcology/LandR@3f4f9e574ceae73c51050af0183a058d116cb6d7,
PredictiveEcology/LandWebUtils@c06ca7f88bbe467d8081ee434c48cc9e3d699b64,
PredictiveEcology/map@3b3fa6aed7d006791e5b03810e5cd9ecda406b1e,
PredictiveEcology/pemisc@788ed1bf07b466fa9ca50427ea4cda0f1900a624,
PredictiveEcology/peutils@d40d97c594c01014101c1edacd48bcace89dcb97,
PredictiveEcology/quickPlot@0a5ee2b153a89aba22ff8722b49a7c11711ef8ab,
PredictiveEcology/reproducible@f2dcc429ecf6283f9f141a9fe709c30d506b0e56,
PredictiveEcology/Require@4a25e88e8b4ca6627299408ad5a41d1b985494d4,
PredictiveEcology/SpaDES.config@d0f8ca039f3bc8e8b8f8f5bea54c83160ed1b470,
PredictiveEcology/SpaDES.core@1c52a5a0d30d30877fc1a18f83b0cfbd3cdd21d7,
PredictiveEcology/SpaDES.docs@48e27eb9c0f36c22bbfc5b9d8d74bb83a61daec7,
PredictiveEcology/SpaDES.project@b432860804aeb5f04888eff5aac76b893e076ee7,
PredictiveEcology/SpaDES.tools@1d3f12ef34c5046432e003aeeff406724539c554,
ropensci/tiler@af03464f48b7e216c6fdf7a644a80d2c25645f4e,
s-u/fastshp@3e0eb833f6292013423d93c71f7c26f6dc2d70f1
Encoding: UTF-8
Language: en-CA