fix: r packages install with conda

Conda shows significant performance increases for the r-packages specifically over the current mamba install.
StatCan · Jan 14, 2025 · 73c8889 · 73c8889
1 parent a487210
commit 73c8889
Showing 1 changed file with 1 addition and 27 deletions.
diff --git a/images/rstudio/Dockerfile b/images/rstudio/Dockerfile
@@ -24,40 +24,14 @@ RUN mkdir -p /etc/rstudio && \
 
 ENV PATH=$PATH:/usr/lib/rstudio-server/bin
 
-RUN mamba install --quiet --yes \
+RUN conda install --quiet --yes \
       'r-rodbc' \
       'r-tidyverse' \
       'r-arrow' \
-      && \
-      clean-layer.sh && \
-      fix-permissions $CONDA_DIR && \
-      fix-permissions /home/$NB_USER
-
-RUN mamba install --quiet --yes \
       'r-aws.s3' \
       'r-catools' \
-      && \
-      clean-layer.sh && \
-      fix-permissions $CONDA_DIR && \
-      fix-permissions /home/$NB_USER
-
-# Install some default R packages
-RUN mamba install --quiet --yes \
       'r-odbc' \
-    && \
-    clean-layer.sh && \
-    fix-permissions $CONDA_DIR && \
-    fix-permissions /home/$NB_USER
-
-# Install some default R packages
-RUN mamba install --quiet --yes \
       'r-hdf5r' \
-    && \
-    clean-layer.sh && \
-    fix-permissions $CONDA_DIR && \
-    fix-permissions /home/$NB_USER
-
-RUN mamba install --quiet --yes \
       'r-sf' \
       'r-e1071' \
       'r-markdown' \