From d5f438946086417494bbf67d7c1799e9bc081b96 Mon Sep 17 00:00:00 2001
From: "github-actions[bot]"
 <41898282+github-actions[bot]@users.noreply.github.com>
Date: Fri, 12 Apr 2024 14:40:05 +0000
Subject: [PATCH 1/2] chore: prepare release v2.5.12

---
 CHANGELOG.md |  2 +-
 CITATION.cff | 51 +++++++++++++++++++++++++++------------------------
 VERSION      |  2 +-
 3 files changed, 29 insertions(+), 26 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index cc53b04..9bd4779 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,4 +1,4 @@
-## RENEE development version
+## RENEE 2.5.12
 
 - Minor documentation improvements. (#100, @kelly-sovacool)
 - Fix RNA report bug, caused by hard-coding of PC1-3, when only PC1-2 were generated. (#104, @slsevilla)
diff --git a/CITATION.cff b/CITATION.cff
index bc68aa0..a1e1171 100644
--- a/CITATION.cff
+++ b/CITATION.cff
@@ -1,28 +1,31 @@
 cff-version: 1.2.0
 message: Please cite RENEE as below.
 authors:
-- family-names: Sevilla
-  given-names: Samantha
-  orcid: https://orcid.org/0000-0002-8734-9875
-  affiliation: Advanced Biomedical Computational Science, Frederick National Laboratory
-    for Cancer Research, Frederick, MD 21702, USA
-- family-names: Sovacool
-  given-names: Kelly
-  orcid: https://orcid.org/0000-0003-3283-829X
-  affiliation: Advanced Biomedical Computational Science, Frederick National Laboratory
-    for Cancer Research, Frederick, MD 21702, USA
-- family-names: Kuhn
-  given-names: Skyler
-  orcid: https://orcid.org/0000-0003-0606-2125
-- family-names: Tandon
-  given-names: Mayank
-  orcid: https://orcid.org/0000-0002-1675-5040
-- family-names: Koparde
-  given-names: Vishal
-  orcid: https://orcid.org/0000-0001-8978-8495
-  affiliation: Advanced Biomedical Computational Science, Frederick National Laboratory
-    for Cancer Research, Frederick, MD 21702, USA
-title: 'RENEE: Rna sEquencing aNalysis pipElinE'
+  - family-names: Sevilla
+    given-names: Samantha
+    orcid: https://orcid.org/0000-0002-8734-9875
+    affiliation:
+      Advanced Biomedical Computational Science, Frederick National Laboratory
+      for Cancer Research, Frederick, MD 21702, USA
+  - family-names: Sovacool
+    given-names: Kelly
+    orcid: https://orcid.org/0000-0003-3283-829X
+    affiliation:
+      Advanced Biomedical Computational Science, Frederick National Laboratory
+      for Cancer Research, Frederick, MD 21702, USA
+  - family-names: Kuhn
+    given-names: Skyler
+    orcid: https://orcid.org/0000-0003-0606-2125
+  - family-names: Tandon
+    given-names: Mayank
+    orcid: https://orcid.org/0000-0002-1675-5040
+  - family-names: Koparde
+    given-names: Vishal
+    orcid: https://orcid.org/0000-0001-8978-8495
+    affiliation:
+      Advanced Biomedical Computational Science, Frederick National Laboratory
+      for Cancer Research, Frederick, MD 21702, USA
+title: "RENEE: Rna sEquencing aNalysis pipElinE"
 url: https://ccbr.github.io/RENEE
 repository-code: https://github.com/CCBR/RENEE
 license: MIT
@@ -31,5 +34,5 @@ identifiers:
   - description: Archived snapshots of all versions
     type: doi
     value: 10.5281/zenodo.10553198
-version: v2.5.11
-date-released: 2024-01-22
+version: v2.5.12
+date-released: "2024-04-12"
diff --git a/VERSION b/VERSION
index 4d47479..dfe30ee 100644
--- a/VERSION
+++ b/VERSION
@@ -1 +1 @@
-2.5.11-dev
+2.5.12

From ce0053a0c264841cb4ead7d888c0842987671a13 Mon Sep 17 00:00:00 2001
From: "github-actions[bot]"
 <41898282+github-actions[bot]@users.noreply.github.com>
Date: Fri, 12 Apr 2024 14:49:45 +0000
Subject: [PATCH 2/2] chore: bump changelog & version after release of v2.5.12

---
 CHANGELOG.md | 2 ++
 VERSION      | 2 +-
 2 files changed, 3 insertions(+), 1 deletion(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 9bd4779..ecc5254 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,3 +1,5 @@
+## RENEE development version
+
 ## RENEE 2.5.12
 
 - Minor documentation improvements. (#100, @kelly-sovacool)
diff --git a/VERSION b/VERSION
index dfe30ee..4fa1b37 100644
--- a/VERSION
+++ b/VERSION
@@ -1 +1 @@
-2.5.12
+2.5.12-dev