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appveyor.yml
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# DO NOT CHANGE the "init" and "install" sections below
# Download script file from GitHub
init:
ps: |
$ErrorActionPreference = "Stop"
Invoke-WebRequest http://raw.github.com/krlmlr/r-appveyor/master/scripts/appveyor-tool.ps1 -OutFile "..\appveyor-tool.ps1"
Import-Module '..\appveyor-tool.ps1'
install:
ps: Bootstrap
cache:
#- C:\RLibrary
# Adapt as necessary starting from here
# check suggested packges
environment:
global:
# r-appveyor will fail to install some packages (e.g. XML) unless we
# specifically request binary packages.
# https://github.com/krlmlr/r-appveyor/issues/133
# https://github.com/krlmlr/r-appveyor/issues/138
# Note that enabling this can cause R-devel builds to fail.
# PKGTYPE: win.binary
BIOC_USE_DEVEL: "FALSE"
GCC_PATH: mingw_64
# The more powerful `x64` image is now default over `i386`.
R_ARCH: x64
# Need to enable when installing GitHub dependency packages.
USE_RTOOLS: true
# https://github.com/r-lib/usethis/issues/640 / Builds 1.0.51 -> 1.0.56
# R_REMOTES_STANDALONE: true
# Set the build matrix to use R-devel, otherwise Bioconductor checks will fail
# because the image now expects BioC 3.9 on R 3.6.
# https://github.com/krlmlr/r-appveyor/issues/144
matrix:
- configuration: 3.5
R_VERSION: 3.5.3
- configuration: 3.6
R_VERSION: 3.6.0
build_script:
# `install_bioc_deps` will fail due to AnnotationHub unless we run these commands.
- travis-tool.sh install_bioc curatedMetagenomicData
- travis-tool.sh install_bioc ggtree
- travis-tool.sh install_bioc_deps
# `install_deps` is now breaking with R 3.6 / BioC 3.9.
# - travis-tool.sh install_deps
test_script:
- travis-tool.sh run_tests
on_failure:
- 7z a failure.zip *.Rcheck\*
- appveyor PushArtifact failure.zip
artifacts:
- path: '*.Rcheck\**\*.log'
name: Logs
- path: '*.Rcheck\**\*.out'
name: Logs
- path: '*.Rcheck\**\*.fail'
name: Logs
- path: '*.Rcheck\**\*.Rout'
name: Logs
- path: '\*_*.tar.gz'
name: Bits
- path: '\*_*.zip'
name: Bits