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[ENH] KILL WITH FIRE (#2037)
* remove unnecessary ExponentTransform import * remove Theta * remove forecasting and datatypes module * remove forecasting and datatypes module * docs * remove text "forecaster" * remove text "forecaster" * remove registry test * revert legacy data_gen * remove theta notebook * base interval transformer * Revert "base interval transformer" This reverts commit 4fcf717. * revert BaseTransformer * remove CollectionToSeriesWrapper * revert BaseTransformer tags * remove dask * remove plotting testing * revert similarity search * remove data conversions notebook * sort out imports * remove dependencies * remove excluded list * remove uncommented all_extras * Some reverts * add functions back to docs * fix * remove notebook init_alg * init algo --------- Co-authored-by: MatthewMiddlehurst <m.middlehurst@uea.ac.uk>
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aeon/__init__.py

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@@ -5,5 +5,3 @@
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__all__ = ["show_versions"]
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from aeon.utils._maint._show_versions import show_versions
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AEON_DEPRECATION_WARNING = True

aeon/base/__init__.py

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"_HeterogenousMetaEstimator",
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]
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import os
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import warnings
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import aeon
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from aeon.base._base import BaseEstimator, BaseObject
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from aeon.base._base_collection import BaseCollectionEstimator
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from aeon.base._base_series import BaseSeriesEstimator
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from aeon.base._meta import _HeterogenousMetaEstimator
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if (
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aeon.AEON_DEPRECATION_WARNING
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and os.environ.get("AEON_DEPRECATION_WARNING", "true").lower() != "false"
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):
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warnings.warn(
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"The aeon package will soon be releasing v1.0.0 with the removal of "
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"legacy modules and interfaces such as BaseTransformer and BaseForecaster. "
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"This will contain breaking changes. See aeon-toolkit.org for more "
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"information. Set aeon.AEON_DEPRECATION_WARNING or the "
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"AEON_DEPRECATION_WARNING environmental variable to 'False' to disable this "
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"warning.",
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FutureWarning,
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stacklevel=0,
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)
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aeon.AEON_DEPRECATION_WARNING = False

aeon/base/tests/test_base_aeon.py

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__maintainer__ = []
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from sklearn.preprocessing import StandardScaler
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from sklearn.tree import DecisionTreeClassifier
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from aeon.classification.feature_based import SummaryClassifier
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from aeon.pipeline import make_pipeline
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from aeon.testing.data_generation import make_example_3d_numpy
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from aeon.transformations.collection import Tabularizer
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def test_get_fitted_params_sklearn():
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"""Tests fitted parameter retrieval with sklearn components.
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AssertionError if logic behind get_fitted_params is incorrect, logic tested:
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calling get_fitted_params on obj aeon component returns expected nested params
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"""
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from aeon.datasets import load_airline
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from aeon.forecasting.trend import TrendForecaster
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y = load_airline()
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f = TrendForecaster().fit(y)
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X, y = make_example_3d_numpy()
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clf = SummaryClassifier(estimator=DecisionTreeClassifier())
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clf.fit(X, y)
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params = f.get_fitted_params()
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# params = clf.get_fitted_params()
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assert "regressor__coef" in params.keys()
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assert "regressor" in params.keys()
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assert "regressor__intercept" in params.keys()
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# todo v1.0.0 fix this
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def test_get_fitted_params_sklearn_nested():
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AssertionError if logic behind get_fitted_params is incorrect, logic tested:
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calling get_fitted_params on obj aeon component returns expected nested params
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"""
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from sklearn.linear_model import LinearRegression
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from sklearn.pipeline import make_pipeline
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from sklearn.preprocessing import StandardScaler
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from aeon.datasets import load_airline
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from aeon.forecasting.trend import TrendForecaster
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y = load_airline()
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pipe = make_pipeline(StandardScaler(), LinearRegression())
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f = TrendForecaster(pipe)
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f.fit(y)
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X, y = make_example_3d_numpy()
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pipe = make_pipeline(Tabularizer(), StandardScaler(), DecisionTreeClassifier())
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clf = SummaryClassifier(estimator=pipe)
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clf.fit(X, y)
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params = f.get_fitted_params()
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# params = clf.get_fitted_params()
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assert "regressor" in params.keys()
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assert "regressor__n_features_in" in params.keys()
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# todo v1.0.0 fix this

aeon/benchmarking/forecasting.py

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aeon/benchmarking/tests/test_benchmarks.py

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aeon/benchmarking/tests/test_forecasting.py

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aeon/classification/compose/_pipeline.py

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@@ -13,7 +13,8 @@ class ClassifierPipeline(BaseCollectionPipeline, BaseClassifier):
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The `ClassifierPipeline` compositor chains transformers and a single classifier.
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The pipeline is constructed with a list of aeon transformers, plus a classifier,
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i.e., estimators following the BaseTransformer and BaseClassifier interface.
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i.e., estimators following the BaseCollectionTransformer and BaseClassifier
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interface.
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The transformer list can be unnamed - a simple list of transformers -
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or string named - a list of pairs of string, estimator.
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