Dockerfile

ENV http_proxy=http://192.168.10.15:8080
ENV https_proxy=http://192.168.10.15:8080

FROM openanalytics/r-base

MAINTAINER rron Lacey

# system libraries of general use
RUN apt-get update && apt-get install -y \
    sudo \
    pandoc \
    pandoc-citeproc \
    libcurl4-gnutls-dev \
    libcairo2-dev \
    libxt-dev \
    libssl-dev \
    libssh2-1-dev \
    libssl1.0.0

# system library dependency for the euler app
RUN apt-get update && apt-get install -y \
    libmpfr-dev

# basic shiny functionality
RUN R -e "install.packages(c('shiny', 'rmarkdown','data.table','RSQLite','DT','shinythemes','dplyr'), repos='https://cloud.r-project.org/')"

# install dependencies of the euler app
RUN R -e "install.packages('Rmpfr', repos='https://cloud.r-project.org/')"

# copy the app to the image
RUN mkdir /root/umls
COPY *.R  /root/umls/
COPY *.pl /root/umls/
COPY *.md /root/umls/

COPY Rprofile.site /usr/lib/R/etc/

EXPOSE 3838

CMD ["R", "-e", "shiny::runApp('/root/umls')"]