diff --git a/docs/source/bootstrapping.md b/docs/source/bootstrapping.md
index be74599..c12e303 100644
--- a/docs/source/bootstrapping.md
+++ b/docs/source/bootstrapping.md
@@ -93,7 +93,9 @@ The qualifier post-pends a 6 chars alpha-numeric string to the deployment role a
 ## IAM Paths Prefixes for Toolchain, Target Roles, and Policies
 We have added support for the use of a IAM Paths for the toolchain role, target account deployment role(s), and policie(s). Using IAM Paths you can create groupings and design a logical separation to simplify permissions management. A common example in organizations is using Service Control Policies enforcing logical separation by team e.g. `/legal/` or `/sales/`, or project name.
 
-A `--role-prefix` and `--policy-prefix` can be used if you want to provide IAM Paths to the roles and policies created by `seed-farmer`. IAM Paths must begin and end with a `/`. More information in [IAM identifiers](https://docs.aws.amazon.com/IAM/latest/UserGuide/reference_identifiers.html).
+A `--role-prefix` and `--policy-prefix` CLI parameters can be used if you want to provide IAM Paths to the toolchain, target roles, and project policy created by `seed-farmer`. If bootstrapped with prefixes, same prefixes must be provided with `apply` and `destroy` CLI commands so that seedfarmer is able to locate correct toolchain and target deployment roles. IAM Paths must begin and end with a `/`. More information in [IAM identifiers](https://docs.aws.amazon.com/IAM/latest/UserGuide/reference_identifiers.html).
+
+Additionally, seed-farmer creates module deployment roles at `apply`. It is possible to provide prefixes for the module deployment roles using the deployment manifest. See [manifests](manifests.md).
 
 ## Prepping the Account / Region
 `seedfarmer` leverages the AWS CDKv2.  This must be bootstrapped in each account/region combination to be used of each target account.
diff --git a/docs/source/manifests.md b/docs/source/manifests.md
index 8844ef5..934ebb7 100644
--- a/docs/source/manifests.md
+++ b/docs/source/manifests.md
@@ -548,8 +548,6 @@ There is a level of logic that is followed:
 2. if a prefix is defined at the account level --- USE IT... ELSE
 4. use default `/` prefix
 
-NOTE: the prefixes provided must match the prefixes provided during bootstrap, unless a custom bootstrap is used.
-
 (archivesecret)=
 ### Archive Secret
 
diff --git a/seedfarmer/__main__.py b/seedfarmer/__main__.py
index 58f5126..d811723 100644
--- a/seedfarmer/__main__.py
+++ b/seedfarmer/__main__.py
@@ -67,7 +67,7 @@ def version() -> None:
 @click.option(
     "--role-prefix",
     default=None,
-    help="""An IAM path prefix to use with the seedfarmer roles.
+    help="""An IAM path prefix of the seedfarmer toolchain and target roles.
     Use only if bootstrapped with this path""",
     required=False,
 )
@@ -212,7 +212,7 @@ def apply(
 @click.option(
     "--role-prefix",
     default=None,
-    help="""An IAM path prefix to use with the seedfarmer roles.
+    help="""An IAM path prefix of the seedfarmer toolchain and target roles.
     Use only if bootstrapped with this path""",
     required=False,
 )