From d9b5243118a9f56f75e548de10e1200fde9e821f Mon Sep 17 00:00:00 2001 From: epiercehoffman Date: Mon, 29 Apr 2024 13:30:13 -0400 Subject: [PATCH] Update gatk_docker with CPX annotation changes to SVAnnotate (#632) --- inputs/values/dockers.json | 2 +- inputs/values/dockers_azure.json | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/inputs/values/dockers.json b/inputs/values/dockers.json index e1cc7f4e5..4eb8cec68 100644 --- a/inputs/values/dockers.json +++ b/inputs/values/dockers.json @@ -2,7 +2,7 @@ "name": "dockers", "cnmops_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/cnmops:2024-01-24-v0.28.4-beta-9debd6d7", "condense_counts_docker": "us.gcr.io/broad-dsde-methods/tsharpe/gatk:4.2.6.1-57-g9e03432", - "gatk_docker": "us.gcr.io/broad-dsde-methods/gatk-sv/gatk:2024-01-15-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT", + "gatk_docker": "us.gcr.io/broad-dsde-methods/eph/gatk:2024-02-16-4.5.0.0-8-gcfd4d87ec-NIGHTLY-SNAPSHOT", "gatk_docker_pesr_override": "us.gcr.io/broad-dsde-methods/tsharpe/gatk:4.2.6.1-57-g9e03432", "genomes_in_the_cloud_docker": "us.gcr.io/broad-gotc-prod/genomes-in-the-cloud:2.3.2-1510681135", "linux_docker": "marketplace.gcr.io/google/ubuntu1804", diff --git a/inputs/values/dockers_azure.json b/inputs/values/dockers_azure.json index 93e0bdbcb..75ee556ae 100644 --- a/inputs/values/dockers_azure.json +++ b/inputs/values/dockers_azure.json @@ -2,7 +2,7 @@ "name": "dockers", "cnmops_docker": "vahid.azurecr.io/gatk-sv/cnmops:2024-01-24-v0.28.4-beta-9debd6d7", "condense_counts_docker": "vahid.azurecr.io/tsharpe/gatk:4.2.6.1-57-g9e03432", - "gatk_docker": "vahid.azurecr.io/gatk-sv/gatk:2024-01-15-4.5.0.0-3-gb68fadc5f-NIGHTLY-SNAPSHOT", + "gatk_docker": "vahid.azurecr.io/gatk-sv/gatk:2024-02-16-4.5.0.0-8-gcfd4d87ec-NIGHTLY-SNAPSHOT", "gatk_docker_pesr_override": "vahid.azurecr.io/tsharpe/gatk:4.2.6.1-57-g9e03432", "genomes_in_the_cloud_docker": "vahid.azurecr.io/genomes-in-the-cloud:2.3.2-1510681135", "linux_docker": "vahid.azurecr.io/google/ubuntu1804",