diff --git a/inputs/values/resources_hg38.json b/inputs/values/resources_hg38.json index 545d4b2b0..e8d86638f 100644 --- a/inputs/values/resources_hg38.json +++ b/inputs/values/resources_hg38.json @@ -17,9 +17,9 @@ "depth_exclude_list_index" : "gs://gatk-sv-resources-public/hg38/v0/sv-resources/resources/v1/depth_blacklist.sorted.bed.gz.tbi", "empty_file" : "gs://gatk-sv-resources-public/hg38/v0/sv-resources/resources/v1/empty.file", "exclude_intervals_for_gcnv_filter_intervals" : "gs://gatk-sv-resources-public/hg38/v0/sv-resources/resources/v1/hg38.wgs.blacklist.wPAR.bed", - "external_af_population" : ["ALL", "AFR", "AMR", "EAS", "EUR"], - "external_af_ref_bed" : "gs://gcp-public-data--broad-references/hg38/v0/sv-resources/resources/v1/gnomad_AF/gnomad_v2.1_sv.sites.GRCh38.bed.gz", - "external_af_ref_bed_prefix" : "gnomad_v2.1_sv", + "external_af_population" : ["ALL", "AFR", "AMR", "EAS", "EUR", "MID", "FIN", "ASJ", "RMI", "SAS", "AMI"], + "external_af_ref_bed" : "gs://gatk-sv-resources-public/gnomad_AF/gnomad_v4_SV.Freq.tsv.gz", + "external_af_ref_bed_prefix" : "gnomad_v4.1_sv", "genome_file" : "gs://gcp-public-data--broad-references/hg38/v0/sv-resources/resources/v1/hg38.genome", "hervk_reference": "gs://gatk-sv-resources-public/hg38/v0/sv-resources/resources/v1/HERVK.sorted.bed.gz", "line1_reference": "gs://gatk-sv-resources-public/hg38/v0/sv-resources/resources/v1/LINE1.sorted.bed.gz",