.gitignore

.idea/vcs.xml
.idea/modules.xml
.idea/misc.xml
.idea/inspectionProfiles/profiles_settings.xml
.idea/hra-cell-type-populations-supporting-information.iml
.Rproj.user

# History files
.Rhistory
.Rapp.history

# Session Data files
.RData
.RDataTmp

# User-specific files
.Ruserdata

# Example code in package build process
*-Ex.R

# Output files from R CMD build
/*.tar.gz

# Output files from R CMD check
/*.Rcheck/

# RStudio files
.Rproj.user/

# produced vignettes
vignettes/*.html
vignettes/*.pdf

# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
.httr-oauth

# knitr and R markdown default cache directories
*_cache/
/cache/

# Temporary files created by R markdown
*.utf8.md
*.knit.md

# R Environment Variables
.Renviron

# translation temp files
po/*~

# RStudio Connect folder
rsconnect/

# Node.js excludes
node_modules/

# scratch directories
scratch/

#GitHub access token
github_access_token.txt
validations/bargraphs/ct_pop_cellTypePerBarGraph.csv

# virtual environments for Jupyter Notebooks
venv

# ignore big Blender files
validations/corridors/corridors_volume.blend
validations/corridors/corridors_volume.blend1
validations/corridors/test.py

# large Blender and GLB files 
all_corridors.blend
all_corridors.blend1
all_corridors.glb

# ignore working validations for related projects
validations/heatmaps/HRA_HeatmapAnalysis_GTEX_Immune.rmd
validations/heatmaps/HRApop_organ_dataset_metadata_pivot*

# Authentication token
token.txt