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KEGGs_pathways.txt
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00010 Glycolysis / Gluconeogenesis
00020 Citrate cycle (TCA cycle)
00030 Pentose phosphate pathway
00040 Pentose and glucuronate interconversions
00051 Fructose and mannose metabolism
00052 Galactose metabolism
00053 Ascorbate and aldarate metabolism
00500 Starch and sucrose metabolism
00520 Amino sugar and nucleotide sugar metabolism
00620 Pyruvate metabolism
00630 Glyoxylate and dicarboxylate metabolism
00640 Propanoate metabolism
00650 Butanoate metabolism
00660 C5-Branched dibasic acid metabolism
00562 Inositol phosphate metabolism
00190 Oxidative phosphorylation
00195 Photosynthesis
00196 Photosynthesis - antenna proteins
00710 Carbon fixation in photosynthetic organisms
00720 Carbon fixation pathways in prokaryotes
00680 Methane metabolism
00910 Nitrogen metabolism
00920 Sulfur metabolism
00061 Fatty acid biosynthesis
00062 Fatty acid elongation
00071 Fatty acid degradation
00072 Synthesis and degradation of ketone bodies
00073 Cutin, suberine and wax biosynthesis
00100 Steroid biosynthesis
00120 Primary bile acid biosynthesis
00121 Secondary bile acid biosynthesis
00140 Steroid hormone biosynthesis
00561 Glycerolipid metabolism
00564 Glycerophospholipid metabolism
00565 Ether lipid metabolism
00600 Sphingolipid metabolism
00590 Arachidonic acid metabolism
00591 Linoleic acid metabolism
00592 alpha-Linolenic acid metabolism
01040 Biosynthesis of unsaturated fatty acids
00230 Purine metabolism
00240 Pyrimidine metabolism
00250 Alanine, aspartate and glutamate metabolism
00260 Glycine, serine and threonine metabolism
00270 Cysteine and methionine metabolism
00280 Valine, leucine and isoleucine degradation
00290 Valine, leucine and isoleucine biosynthesis
00300 Lysine biosynthesis
00310 Lysine degradation
00220 Arginine biosynthesis
00330 Arginine and proline metabolism
00340 Histidine metabolism
00350 Tyrosine metabolism
00360 Phenylalanine metabolism
00380 Tryptophan metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
00410 beta-Alanine metabolism
00430 Taurine and hypotaurine metabolism
00440 Phosphonate and phosphinate metabolism
00450 Selenocompound metabolism
00460 Cyanoamino acid metabolism
00471 D-Glutamine and D-glutamate metabolism
00472 D-Arginine and D-ornithine metabolism
00473 D-Alanine metabolism
00480 Glutathione metabolism
00510 N-Glycan biosynthesis
00513 Various types of N-glycan biosynthesis
00512 Mucin type O-glycan biosynthesis
00515 Mannose type O-glycan biosynthesis
00514 Other types of O-glycan biosynthesis
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
00533 Glycosaminoglycan biosynthesis - keratan sulfate
00531 Glycosaminoglycan degradation
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
00604 Glycosphingolipid biosynthesis - ganglio series
00540 Lipopolysaccharide biosynthesis
00550 Peptidoglycan biosynthesis
00511 Other glycan degradation
00571 Lipoarabinomannan (LAM) biosynthesis
00572 Arabinogalactan biosynthesis - Mycobacterium
00730 Thiamine metabolism
00740 Riboflavin metabolism
00750 Vitamin B6 metabolism
00760 Nicotinate and nicotinamide metabolism
00770 Pantothenate and CoA biosynthesis
00780 Biotin metabolism
00785 Lipoic acid metabolism
00790 Folate biosynthesis
00670 One carbon pool by folate
00830 Retinol metabolism
00860 Porphyrin and chlorophyll metabolism
00130 Ubiquinone and other terpenoid-quinone biosynthesis
00900 Terpenoid backbone biosynthesis
00902 Monoterpenoid biosynthesis
00909 Sesquiterpenoid and triterpenoid biosynthesis
00904 Diterpenoid biosynthesis
00906 Carotenoid biosynthesis
00905 Brassinosteroid biosynthesis
00981 Insect hormone biosynthesis
00908 Zeatin biosynthesis
00903 Limonene and pinene degradation
00281 Geraniol degradation
01052 Type I polyketide structures
00522 Biosynthesis of 12-, 14- and 16-membered macrolides
01051 Biosynthesis of ansamycins
01059 Biosynthesis of enediyne antibiotics
01056 Biosynthesis of type II polyketide backbone
01057 Biosynthesis of type II polyketide products
00253 Tetracycline biosynthesis
00523 Polyketide sugar unit biosynthesis
01054 Nonribosomal peptide structures
01053 Biosynthesis of siderophore group nonribosomal peptides
01055 Biosynthesis of vancomycin group antibiotics
00940 Phenylpropanoid biosynthesis
00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
00941 Flavonoid biosynthesis
00944 Flavone and flavonol biosynthesis
00942 Anthocyanin biosynthesis
00943 Isoflavonoid biosynthesis
00901 Indole alkaloid biosynthesis
00403 Indole diterpene alkaloid biosynthesis
00950 Isoquinoline alkaloid biosynthesis
00960 Tropane, piperidine and pyridine alkaloid biosynthesis
01058 Acridone alkaloid biosynthesis
00232 Caffeine metabolism
00965 Betalain biosynthesis
00966 Glucosinolate biosynthesis
00402 Benzoxazinoid biosynthesis
00311 Penicillin and cephalosporin biosynthesis
00332 Carbapenem biosynthesis
00261 Monobactam biosynthesis
00331 Clavulanic acid biosynthesis
00521 Streptomycin biosynthesis
00524 Neomycin, kanamycin and gentamicin biosynthesis
00525 Acarbose and validamycin biosynthesis
00231 Puromycin biosynthesis
00401 Novobiocin biosynthesis
00404 Staurosporine biosynthesis
00405 Phenazine biosynthesis
00333 Prodigiosin biosynthesis
00254 Aflatoxin biosynthesis
00999 Biosynthesis of secondary metabolites - unclassified
00362 Benzoate degradation
00627 Aminobenzoate degradation
00364 Fluorobenzoate degradation
00625 Chloroalkane and chloroalkene degradation
00361 Chlorocyclohexane and chlorobenzene degradation
00623 Toluene degradation
00622 Xylene degradation
00633 Nitrotoluene degradation
00642 Ethylbenzene degradation
00643 Styrene degradation
00791 Atrazine degradation
00930 Caprolactam degradation
00363 Bisphenol degradation
00621 Dioxin degradation
00626 Naphthalene degradation
00624 Polycyclic aromatic hydrocarbon degradation
00365 Furfural degradation
00984 Steroid degradation
00980 Metabolism of xenobiotics by cytochrome P450
00982 Drug metabolism - cytochrome P450
00983 Drug metabolism - other enzymes
09113 Global maps only
03020 RNA polymerase
03022 Basal transcription factors
03040 Spliceosome
03010 Ribosome
00970 Aminoacyl-tRNA biosynthesis
03013 RNA transport
03015 mRNA surveillance pathway
03008 Ribosome biogenesis in eukaryotes
03060 Protein export
04141 Protein processing in endoplasmic reticulum
04130 SNARE interactions in vesicular transport
04120 Ubiquitin mediated proteolysis
04122 Sulfur relay system
03050 Proteasome
03018 RNA degradation
03030 DNA replication
03410 Base excision repair
03420 Nucleotide excision repair
03430 Mismatch repair
03440 Homologous recombination
03450 Non-homologous end-joining
03460 Fanconi anemia pathway
02010 ABC transporters
02060 Phosphotransferase system (PTS)
03070 Bacterial secretion system
02020 Two-component system
04014 Ras signaling pathway
04015 Rap1 signaling pathway
04010 MAPK signaling pathway
04013 MAPK signaling pathway - fly
04016 MAPK signaling pathway - plant
04011 MAPK signaling pathway - yeast
04012 ErbB signaling pathway
04310 Wnt signaling pathway
04330 Notch signaling pathway
04340 Hedgehog signaling pathway
04341 Hedgehog signaling pathway - fly
04350 TGF-beta signaling pathway
04390 Hippo signaling pathway
04391 Hippo signaling pathway - fly
04392 Hippo signaling pathway - multiple species
04370 VEGF signaling pathway
04371 Apelin signaling pathway
04630 Jak-STAT signaling pathway
04064 NF-kappa B signaling pathway
04668 TNF signaling pathway
04066 HIF-1 signaling pathway
04068 FoxO signaling pathway
04020 Calcium signaling pathway
04070 Phosphatidylinositol signaling system
04072 Phospholipase D signaling pathway
04071 Sphingolipid signaling pathway
04024 cAMP signaling pathway
04022 cGMP-PKG signaling pathway
04151 PI3K-Akt signaling pathway
04152 AMPK signaling pathway
04150 mTOR signaling pathway
04075 Plant hormone signal transduction
04080 Neuroactive ligand-receptor interaction
04060 Cytokine-cytokine receptor interaction
04512 ECM-receptor interaction
04514 Cell adhesion molecules (CAMs)
04144 Endocytosis
04145 Phagosome
04142 Lysosome
04146 Peroxisome
04140 Autophagy - animal
04138 Autophagy - yeast
04136 Autophagy - other
04137 Mitophagy - animal
04139 Mitophagy - yeast
04110 Cell cycle
04111 Cell cycle - yeast
04112 Cell cycle - Caulobacter
04113 Meiosis - yeast
04114 Oocyte meiosis
04210 Apoptosis
04214 Apoptosis - fly
04215 Apoptosis - multiple species
04216 Ferroptosis
04217 Necroptosis
04115 p53 signaling pathway
04218 Cellular senescence
04510 Focal adhesion
04520 Adherens junction
04530 Tight junction
04540 Gap junction
04550 Signaling pathways regulating pluripotency of stem cells
02024 Quorum sensing
05111 Biofilm formation - Vibrio cholerae
02025 Biofilm formation - Pseudomonas aeruginosa
02026 Biofilm formation - Escherichia coli
02030 Bacterial chemotaxis
02040 Flagellar assembly
04810 Regulation of actin cytoskeleton
04640 Hematopoietic cell lineage
04610 Complement and coagulation cascades
04611 Platelet activation
04620 Toll-like receptor signaling pathway
04624 Toll and Imd signaling pathway
04621 NOD-like receptor signaling pathway
04622 RIG-I-like receptor signaling pathway
04623 Cytosolic DNA-sensing pathway
04625 C-type lectin receptor signaling pathway
04650 Natural killer cell mediated cytotoxicity
04612 Antigen processing and presentation
04660 T cell receptor signaling pathway
04658 Th1 and Th2 cell differentiation
04659 Th17 cell differentiation
04657 IL-17 signaling pathway
04662 B cell receptor signaling pathway
04664 Fc epsilon RI signaling pathway
04666 Fc gamma R-mediated phagocytosis
04670 Leukocyte transendothelial migration
04672 Intestinal immune network for IgA production
04062 Chemokine signaling pathway
04911 Insulin secretion
04910 Insulin signaling pathway
04922 Glucagon signaling pathway
04923 Regulation of lipolysis in adipocytes
04920 Adipocytokine signaling pathway
03320 PPAR signaling pathway
04912 GnRH signaling pathway
04913 Ovarian steroidogenesis
04915 Estrogen signaling pathway
04914 Progesterone-mediated oocyte maturation
04917 Prolactin signaling pathway
04921 Oxytocin signaling pathway
04926 Relaxin signaling pathway
04918 Thyroid hormone synthesis
04919 Thyroid hormone signaling pathway
04928 Parathyroid hormone synthesis, secretion and action
04916 Melanogenesis
04924 Renin secretion
04614 Renin-angiotensin system
04925 Aldosterone synthesis and secretion
04927 Cortisol synthesis and secretion
04260 Cardiac muscle contraction
04261 Adrenergic signaling in cardiomyocytes
04270 Vascular smooth muscle contraction
04970 Salivary secretion
04971 Gastric acid secretion
04972 Pancreatic secretion
04976 Bile secretion
04973 Carbohydrate digestion and absorption
04974 Protein digestion and absorption
04975 Fat digestion and absorption
04979 Cholesterol metabolism
04977 Vitamin digestion and absorption
04978 Mineral absorption
04962 Vasopressin-regulated water reabsorption
04960 Aldosterone-regulated sodium reabsorption
04961 Endocrine and other factor-regulated calcium reabsorption
04964 Proximal tubule bicarbonate reclamation
04966 Collecting duct acid secretion
04724 Glutamatergic synapse
04727 GABAergic synapse
04725 Cholinergic synapse
04728 Dopaminergic synapse
04726 Serotonergic synapse
04720 Long-term potentiation
04730 Long-term depression
04723 Retrograde endocannabinoid signaling
04721 Synaptic vesicle cycle
04722 Neurotrophin signaling pathway
04744 Phototransduction
04745 Phototransduction - fly
04740 Olfactory transduction
04742 Taste transduction
04750 Inflammatory mediator regulation of TRP channels
04320 Dorso-ventral axis formation
04360 Axon guidance
04380 Osteoclast differentiation
04211 Longevity regulating pathway
04212 Longevity regulating pathway - worm
04213 Longevity regulating pathway - multiple species
04710 Circadian rhythm
04713 Circadian entrainment
04711 Circadian rhythm - fly
04712 Circadian rhythm - plant
04714 Thermogenesis
04626 Plant-pathogen interaction
05200 Pathways in cancer
05230 Central carbon metabolism in cancer
05231 Choline metabolism in cancer
05202 Transcriptional misregulation in cancer
05206 MicroRNAs in cancer
05205 Proteoglycans in cancer
05204 Chemical carcinogenesis
05203 Viral carcinogenesis
05210 Colorectal cancer
05212 Pancreatic cancer
05225 Hepatocellular carcinoma
05226 Gastric cancer
05214 Glioma
05216 Thyroid cancer
05221 Acute myeloid leukemia
05220 Chronic myeloid leukemia
05217 Basal cell carcinoma
05218 Melanoma
05211 Renal cell carcinoma
05219 Bladder cancer
05215 Prostate cancer
05213 Endometrial cancer
05224 Breast cancer
05222 Small cell lung cancer
05223 Non-small cell lung cancer
05310 Asthma
05322 Systemic lupus erythematosus
05323 Rheumatoid arthritis
05320 Autoimmune thyroid disease
05321 Inflammatory bowel disease (IBD)
05330 Allograft rejection
05332 Graft-versus-host disease
05340 Primary immunodeficiency
05010 Alzheimer disease
05012 Parkinson disease
05014 Amyotrophic lateral sclerosis (ALS)
05016 Huntington disease
05020 Prion diseases
05030 Cocaine addiction
05031 Amphetamine addiction
05032 Morphine addiction
05033 Nicotine addiction
05034 Alcoholism
05418 Fluid shear stress and atherosclerosis
05410 Hypertrophic cardiomyopathy (HCM)
05412 Arrhythmogenic right ventricular cardiomyopathy (ARVC)
05414 Dilated cardiomyopathy (DCM)
05416 Viral myocarditis
04930 Type II diabetes mellitus
04940 Type I diabetes mellitus
04950 Maturity onset diabetes of the young
04932 Non-alcoholic fatty liver disease (NAFLD)
04931 Insulin resistance
04933 AGE-RAGE signaling pathway in diabetic complications
04934 Cushing syndrome
05110 Vibrio cholerae infection
05120 Epithelial cell signaling in Helicobacter pylori infection
05130 Pathogenic Escherichia coli infection
05132 Salmonella infection
05131 Shigellosis
05133 Pertussis
05134 Legionellosis
05150 Staphylococcus aureus infection
05152 Tuberculosis
05100 Bacterial invasion of epithelial cells
05166 Human T-cell leukemia virus 1 infection
05170 Human immunodeficiency virus 1 infection
05162 Measles
05164 Influenza A
05161 Hepatitis B
05160 Hepatitis C
05168 Herpes simplex infection
05163 Human cytomegalovirus infection
05167 Kaposi sarcoma-associated herpesvirus infection
05169 Epstein-Barr virus infection
05165 Human papillomavirus infection
05146 Amoebiasis
05144 Malaria
05145 Toxoplasmosis
05140 Leishmaniasis
05142 Chagas disease (American trypanosomiasis)
05143 African trypanosomiasis
01501 beta-Lactam resistance
01502 Vancomycin resistance
01503 Cationic antimicrobial peptide (CAMP) resistance
01521 EGFR tyrosine kinase inhibitor resistance
01524 Platinum drug resistance
01523 Antifolate resistance
01522 Endocrine resistance
01000 Enzymes
01001 Protein kinases
01009 Protein phosphatases and associated proteins
01002 Peptidases
01003 Glycosyltransferases
01005 Lipopolysaccharide biosynthesis proteins
01011 Peptidoglycan biosynthesis and degradation proteins
01004 Lipid biosynthesis proteins
01008 Polyketide biosynthesis proteins
01006 Prenyltransferases
01007 Amino acid related enzymes
00199 Cytochrome P450
00194 Photosynthesis proteins
03000 Transcription factors
03021 Transcription machinery
03019 Messenger RNA biogenesis
03041 Spliceosome
03011 Ribosome
03009 Ribosome biogenesis
03016 Transfer RNA biogenesis
03012 Translation factors
03110 Chaperones and folding catalysts
04131 Membrane trafficking
04121 Ubiquitin system
03051 Proteasome
03032 DNA replication proteins
03036 Chromosome and associated proteins
03400 DNA repair and recombination proteins
03029 Mitochondrial biogenesis
02000 Transporters
02044 Secretion system
02042 Bacterial toxins
02022 Two-component system
02035 Bacterial motility proteins
04812 Cytoskeleton proteins
04147 Exosome
02048 Prokaryotic defense system
04030 G protein-coupled receptors
04050 Cytokine receptors
04054 Pattern recognition receptors
03310 Nuclear receptors
04040 Ion channels
04031 GTP-binding proteins
04052 Cytokines and growth factors
04515 Cell adhesion molecules
04090 CD molecules
00535 Proteoglycans
00536 Glycosaminoglycan binding proteins
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
04091 Lectins
01504 Antimicrobial resistance genes
03200 Viral proteins
03100 Non-coding RNAs
99980 Enzymes with EC numbers
99981 Carbohydrate metabolism
99982 Energy metabolism
99983 Lipid metabolism
99984 Nucleotide metabolism
99985 Amino acid metabolism
99986 Glycan metabolism
99987 Cofactor metabolism
99988 Secondary metabolism
99999 Others
99973 Transcription
99974 Translation
99975 Protein processing
99976 Replication and repair
99998 Others
99977 Transport
99978 Cell growth
99993 Cell motility
99995 Signaling proteins
99992 Structural proteins
99994 Others
99979 Unclassified viral proteins
99996 General function prediction only
99997 Function unknown