Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

File missing f"{experiment}_{dataset}.pickle" #1

Open
zhoux85 opened this issue Feb 2, 2025 · 0 comments
Open

File missing f"{experiment}_{dataset}.pickle" #1

zhoux85 opened this issue Feb 2, 2025 · 0 comments

Comments

@zhoux85
Copy link

zhoux85 commented Feb 2, 2025

Hi,
Great work! I want to reproduce the result in the paper and extract single-cell level intensity. However, I found that some key files are missing, for example, f"{experiment}_{dataset}.pickle" in https://github.com/coskunlab/scSpaMet/blob/1cd3d21c35b6da6504037f2c2bca2a420eca931e/notebooks/04_extract_intensity.ipynb

Can you provide these files? or share the processed 'intensity_IMC_{experiment}_{dataset}.csv'?

Thank you for your time and effort!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant