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environment.yml
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name: medical_representation
channels:
- rapidsai
- conda-forge
- nvidia
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- aws-c-auth=0.7.4=hc8144f4_1
- aws-c-cal=0.6.2=h09139f6_2
- aws-c-common=0.9.3=hd590300_0
- aws-c-compression=0.2.17=h184a658_3
- aws-c-event-stream=0.3.2=hd6ebb48_1
- aws-c-http=0.7.13=hc690213_1
- aws-c-io=0.13.32=h161b759_6
- aws-c-mqtt=0.9.6=h32970c0_2
- aws-c-s3=0.3.17=hb5e3142_3
- aws-c-sdkutils=0.1.12=h184a658_2
- aws-checksums=0.1.17=h184a658_2
- aws-crt-cpp=0.23.1=h94c364a_5
- aws-sdk-cpp=1.11.156=h6600424_3
- bokeh=3.3.1=pyhd8ed1ab_0
- brotli-python=1.1.0=py310hc6cd4ac_1
- bzip2=1.0.8=hd590300_5
- c-ares=1.22.1=hd590300_0
- ca-certificates=2023.11.17=hbcca054_0
- cachetools=5.3.2=pyhd8ed1ab_0
- click=8.1.7=unix_pyh707e725_0
- cloudpickle=3.0.0=pyhd8ed1ab_0
- contourpy=1.2.0=py310hd41b1e2_0
- cuda-cccl_linux-64=12.0.90=ha770c72_1
- cuda-cudart=12.0.107=h59595ed_6
- cuda-cudart-dev=12.0.107=h59595ed_6
- cuda-cudart-dev_linux-64=12.0.107=h59595ed_6
- cuda-cudart-static=12.0.107=h59595ed_6
- cuda-cudart-static_linux-64=12.0.107=h59595ed_6
- cuda-cudart_linux-64=12.0.107=h59595ed_6
- cuda-nvcc-dev_linux-64=12.0.76=ha770c72_1
- cuda-nvcc-impl=12.0.76=h59595ed_1
- cuda-nvcc-tools=12.0.76=h59595ed_1
- cuda-nvrtc=12.0.76=h59595ed_1
- cuda-nvtx=12.0.76=hcb278e6_0
- cuda-profiler-api=12.0.76=ha770c72_0
- cuda-python=12.0.0=py310hfb71131_3
- cuda-version=12.0=hffde075_2
- cudf=23.10.02=cuda12_py310_231116_gece2b2c524_0
- cuml=23.10.00=cuda12_py310_231011_g623996072_0
- cupy=12.2.0=py310hfc31588_4
- cytoolz=0.12.2=py310h2372a71_1
- dask=2023.9.2=pyhd8ed1ab_0
- dask-core=2023.9.2=pyhd8ed1ab_0
- dask-cuda=23.10.00=py310_231011_gdc811d3_0
- dask-cudf=23.10.02=cuda12_py310_231116_gece2b2c524_0
- distributed=2023.9.2=pyhd8ed1ab_0
- dlpack=0.5=h9c3ff4c_0
- fastrlock=0.8.2=py310hc6cd4ac_1
- fmt=9.1.0=h924138e_0
- freetype=2.12.1=h267a509_2
- fsspec=2023.10.0=pyhca7485f_0
- gflags=2.2.2=he1b5a44_1004
- glog=0.6.0=h6f12383_0
- gmock=1.14.0=ha770c72_1
- gtest=1.14.0=h00ab1b0_1
- importlib-metadata=6.8.0=pyha770c72_0
- importlib_metadata=6.8.0=hd8ed1ab_0
- jinja2=3.1.2=pyhd8ed1ab_1
- joblib=1.3.2=pyhd8ed1ab_0
- keyutils=1.6.1=h166bdaf_0
- krb5=1.21.2=h659d440_0
- lcms2=2.15=hb7c19ff_3
- ld_impl_linux-64=2.40=h41732ed_0
- lerc=4.0.0=h27087fc_0
- libabseil=20230802.1=cxx17_h59595ed_0
- libarrow=12.0.1=h1935d02_14_cpu
- libblas=3.9.0=20_linux64_openblas
- libbrotlicommon=1.1.0=hd590300_1
- libbrotlidec=1.1.0=hd590300_1
- libbrotlienc=1.1.0=hd590300_1
- libcblas=3.9.0=20_linux64_openblas
- libcrc32c=1.1.2=h9c3ff4c_0
- libcublas=12.0.1.189=hcb278e6_2
- libcublas-dev=12.0.1.189=hcb278e6_2
- libcudf=23.10.02=cuda12_231116_gece2b2c524_0
- libcufft=11.0.0.21=hcb278e6_1
- libcufile=1.5.0.59=hcb278e6_0
- libcufile-dev=1.5.0.59=hcb278e6_0
- libcuml=23.10.00=cuda12_231011_g623996072_0
- libcumlprims=23.10.00=cuda12_231011_ge818397_0
- libcurand=10.3.1.50=hcb278e6_0
- libcurand-dev=10.3.1.50=hcb278e6_0
- libcurl=8.4.0=hca28451_0
- libcusolver=11.4.2.57=hcb278e6_1
- libcusolver-dev=11.4.2.57=hcb278e6_1
- libcusparse=12.0.0.76=hcb278e6_1
- libcusparse-dev=12.0.0.76=hcb278e6_1
- libdeflate=1.19=hd590300_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libevent=2.1.12=hf998b51_1
- libffi=3.4.2=h7f98852_5
- libgcc-ng=13.2.0=h807b86a_3
- libgfortran-ng=13.2.0=h69a702a_3
- libgfortran5=13.2.0=ha4646dd_3
- libgomp=13.2.0=h807b86a_3
- libgoogle-cloud=2.12.0=h8d7e28b_2
- libgrpc=1.57.0=ha4d0f93_2
- libjpeg-turbo=3.0.0=hd590300_1
- libkvikio=23.10.00=cuda12_231011_g5ea0525_0
- liblapack=3.9.0=20_linux64_openblas
- libllvm14=14.0.6=hcd5def8_4
- libnghttp2=1.58.0=h47da74e_0
- libnsl=2.0.1=hd590300_0
- libnuma=2.0.16=h0b41bf4_1
- libnvjitlink=12.0.76=hcb278e6_1
- libopenblas=0.3.25=pthreads_h413a1c8_0
- libpng=1.6.39=h753d276_0
- libprotobuf=4.23.4=hf27288f_6
- libraft=23.10.00=cuda12_231011_gafdddfb3_0
- libraft-headers=23.10.00=cuda12_231011_gafdddfb3_0
- libraft-headers-only=23.10.00=cuda12_231011_gafdddfb3_0
- librmm=23.10.00=cuda12_231011_gf8ac6f8e_0
- libsqlite=3.44.1=h2797004_0
- libssh2=1.11.0=h0841786_0
- libstdcxx-ng=13.2.0=h7e041cc_3
- libthrift=0.19.0=hb90f79a_1
- libtiff=4.6.0=ha9c0a0a_2
- libutf8proc=2.8.0=h166bdaf_0
- libuuid=2.38.1=h0b41bf4_0
- libwebp-base=1.3.2=hd590300_0
- libxcb=1.15=h0b41bf4_0
- libzlib=1.2.13=hd590300_5
- llvmlite=0.40.1=py310h1b8f574_0
- locket=1.0.0=pyhd8ed1ab_0
- lz4=4.3.2=py310h350c4a5_1
- lz4-c=1.9.4=hcb278e6_0
- markdown-it-py=3.0.0=pyhd8ed1ab_0
- markupsafe=2.1.3=py310h2372a71_1
- mdurl=0.1.0=pyhd8ed1ab_0
- msgpack-python=1.0.6=py310hd41b1e2_0
- nccl=2.19.4.1=h3a97aeb_0
- ncurses=6.4=h59595ed_2
- numba=0.57.1=py310h0f6aa51_0
- nvcomp=2.6.1=h10b603f_3
- nvtx=0.2.8=py310h2372a71_1
- openjpeg=2.5.0=h488ebb8_3
- openssl=3.1.4=hd590300_0
- orc=1.9.0=h52d3b3c_2
- packaging=23.2=pyhd8ed1ab_0
- partd=1.4.1=pyhd8ed1ab_0
- pillow=10.1.0=py310h01dd4db_0
- pip=23.3.1=pyhd8ed1ab_0
- protobuf=4.23.4=py310h620c231_3
- psutil=5.9.5=py310h2372a71_1
- pthread-stubs=0.4=h36c2ea0_1001
- pyarrow=12.0.1=py310hf9e7431_14_cpu
- pygments=2.17.2=pyhd8ed1ab_0
- pylibraft=23.10.00=cuda12_py310_231011_gafdddfb3_0
- pynvml=11.4.1=pyhd8ed1ab_0
- pysocks=1.7.1=pyha2e5f31_6
- python=3.10.13=hd12c33a_0_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python_abi=3.10=4_cp310
- pytz=2023.3.post1=pyhd8ed1ab_0
- pyyaml=6.0.1=py310h2372a71_1
- raft-dask=23.10.00=cuda12_py310_231011_gafdddfb3_0
- rdma-core=28.9=h59595ed_1
- re2=2023.03.02=h8c504da_0
- readline=8.2=h8228510_1
- rich=13.7.0=pyhd8ed1ab_0
- rmm=23.10.00=cuda12_py310_231011_gf8ac6f8e_0
- s2n=1.3.54=h06160fa_0
- setuptools=68.2.2=pyhd8ed1ab_0
- six=1.16.0=pyh6c4a22f_0
- snappy=1.1.10=h9fff704_0
- sortedcontainers=2.4.0=pyhd8ed1ab_0
- spdlog=1.11.0=h9b3ece8_1
- tblib=2.0.0=pyhd8ed1ab_0
- tk=8.6.13=noxft_h4845f30_101
- toolz=0.12.0=pyhd8ed1ab_0
- tornado=6.3.3=py310h2372a71_1
- treelite=3.9.1=py310h4a6579d_0
- typing_extensions=4.8.0=pyha770c72_0
- ucx=1.14.1=h195a15c_5
- ucx-proc=1.0.0=gpu
- ucx-py=0.34.00=py310_231011_g17dceab_0
- urllib3=2.1.0=pyhd8ed1ab_0
- wheel=0.41.3=pyhd8ed1ab_0
- xorg-libxau=1.0.11=hd590300_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xyzservices=2023.10.1=pyhd8ed1ab_0
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7f98852_2
- zict=3.0.0=pyhd8ed1ab_0
- zipp=3.17.0=pyhd8ed1ab_0
- zstd=1.5.5=hfc55251_0
- pip:
- adjusttext==0.8
- aiohttp==3.9.0
- aiosignal==1.3.1
- appdirs==1.4.4
- asttokens==2.4.1
- async-timeout==4.0.3
- attrs==23.1.0
- certifi==2023.11.17
- cycler==0.12.1
- cython==0.29.36
- dask-glm==0.3.1
- dask-ml==2023.3.24
- decorator==4.4.2
- docker-pycreds==0.4.0
- docopt==0.6.2
- exceptiongroup==1.2.0
- executing==2.0.1
- filelock==3.13.1
- fonttools==4.45.1
- frozenlist==1.4.0
- gitdb==4.0.11
- gitpython==3.1.40
- google-auth-oauthlib==1.1.0
- gradient-descent-the-ultimate-optimizer==1.0
- h5py==3.10.0
- hdbscan==0.8.33
- imageio==2.33.0
- imageio-ffmpeg==0.4.9
- ipdb==0.13.13
- ipython==8.17.2
- jedi==0.19.1
- kiwisolver==1.4.5
- lazy-loader==0.3
- lightning-utilities==0.10.0
- matplotlib==3.8.2
- matplotlib-inline==0.1.6
- moviepy==1.0.3
- mpmath==1.3.0
- multidict==6.0.4
- multipledispatch==1.0.0
- networkx==3.2.1
- nltk==3.8.1
- numpy==1.26.2
- nvidia-cublas-cu12==12.1.3.1
- nvidia-cuda-cupti-cu12==12.1.105
- nvidia-cuda-nvrtc-cu12==12.1.105
- nvidia-cuda-runtime-cu12==12.1.105
- nvidia-cudnn-cu12==8.9.2.26
- nvidia-cufft-cu12==11.0.2.54
- nvidia-curand-cu12==10.3.2.106
- nvidia-cusolver-cu12==11.4.5.107
- nvidia-cusparse-cu12==12.1.0.106
- nvidia-nccl-cu12==2.18.1
- nvidia-nvjitlink-cu12==12.3.101
- nvidia-nvtx-cu12==12.1.105
- pandas==2.1.3
- parso==0.8.3
- pexpect==4.8.0
- pipreqs==0.4.13
- proglog==0.1.10
- prompt-toolkit==3.0.41
- ptyprocess==0.7.0
- pure-eval==0.2.2
- pyparsing==3.1.1
- pytorch-lightning==2.1.2
- regex==2023.10.3
- rsatoolbox==0.1.5
- scikit-image==0.22.0
- scikit-learn==1.3.2
- scipy==1.11.4
- sentry-sdk==1.37.1
- setproctitle==1.3.3
- smmap==5.0.1
- sparse==0.14.0
- stack-data==0.6.3
- sympy==1.12
- tensorboard==2.15.1
- tensorboard-data-server==0.7.2
- threadpoolctl==3.2.0
- tifffile==2023.12.9
- toml==0.10.2
- tomli==2.0.1
- torch==2.1.1
- torchdata==0.7.1
- torchmetrics==1.2.0
- tqdm==4.66.1
- traitlets==5.13.0
- treelite-runtime==3.9.1
- triton==2.1.0
- tzdata==2023.3
- wandb==0.16.0
- wcwidth==0.2.12
- werkzeug==3.0.1
- yarg==0.1.9
- yarl==1.9.3
prefix: /home/borneta/miniconda3/envs/medical_representation