forked from GMOD/jbrowse
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathindex.html
66 lines (59 loc) · 3.03 KB
/
index.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
<!DOCTYPE html
PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
<head>
<title>JBrowse</title>
<link rel="stylesheet" type="text/css" href="jslib/dijit/themes/tundra/tundra.css"></link>
<link rel="stylesheet" type="text/css" href="jslib/dojo/resources/dojo.css"></link>
<link rel="stylesheet" type="text/css" href="genome.css"></link>
<style type="text/css">
html, body { height: 100%; width: 100%; padding: 0; border: 0; }
</style>
<script type="text/javascript" src="jslib/dojo/dojo.js" djConfig="isDebug: false"></script>
<script type="text/javascript" src="jslib/dojo/jbrowse_dojo.js" ></script>
<!-- js_source_files -->
<!-- the files between the "js_source_files" comments get replaced
when the JS gets minified (see the minification rule in the Makefile) -->
<script type="text/javascript" src="js/Browser.js"></script>
<script type="text/javascript" src="js/Util.js"></script>
<script type="text/javascript" src="js/NCList.js"></script>
<script type="text/javascript" src="js/LazyPatricia.js"></script>
<script type="text/javascript" src="js/LazyArray.js"></script>
<script type="text/javascript" src="js/Track.js"></script>
<script type="text/javascript" src="js/SequenceTrack.js"></script>
<script type="text/javascript" src="js/Layout.js"></script>
<script type="text/javascript" src="js/FeatureTrack.js"></script>
<script type="text/javascript" src="js/UITracks.js"></script>
<script type="text/javascript" src="js/ImageTrack.js"></script>
<script type="text/javascript" src="js/GenomeView.js"></script>
<!-- js_source_files -->
<script type="text/javascript" src="data/refSeqs.js"></script>
<script type="text/javascript" src="data/trackInfo.js"></script>
<script type="text/javascript">
/* <![CDATA[ */
var queryParams = dojo.queryToObject(window.location.search.slice(1));
var bookmarkCallback = function(brwsr) {
return window.location.protocol
+ "//" + window.location.host
+ window.location.pathname
+ "?loc=" + brwsr.visibleRegion()
+ "&tracks=" + brwsr.visibleTracks();
}
var b = new Browser({
containerID: "GenomeBrowser",
refSeqs: refSeqs,
trackData: trackInfo,
defaultTracks: "DNA,gene,mRNA,noncodingRNA",
location: queryParams.loc,
tracks: queryParams.tracks,
bookmark: bookmarkCallback,
dataRoot: "data/"
});
/* ]]> */
</script>
</head>
<body>
<div id="GenomeBrowser" style="height: 100%; width: 100%; padding: 0; border: 0;"></div>
</body>
</html>