Schema documentation for emdb.xsd

diff --git a/emdb_schemas/current/doc/Untitled.html b/emdb_schemas/current/doc/Untitled.html deleted file mode 100644 index e917e1d..0000000 --- a/emdb_schemas/current/doc/Untitled.html +++ /dev/null @@ -1,4 +0,0 @@ - - -Schema documentation for emdb.xsd \ No newline at end of file diff --git a/emdb_schemas/current/doc/Untitled.indexList.html b/emdb_schemas/current/doc/Untitled.indexList.html deleted file mode 100644 index 415b5f5..0000000 --- a/emdb_schemas/current/doc/Untitled.indexList.html +++ /dev/null @@ -1,728 +0,0 @@ - - - - - Schema documentation for - - -

Table of Contents

-

- -

-

-

-

emdb.xsd

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

	- Main Schema -
	- - emdb.xsd - -

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

-

Elements

-

-

-

additional_map

-

cell_supramolecule

-

citation_type

-

complex_supramolecule

-

crystallography_microscopy

-

crystallography_preparation

-

crystallography_processing

-

crystallography_validation

-

dna

-

em_label

-

emd

-

fsc

-

fsc_curve

-

half_map

-

helical_microscopy

-

helical_preparation

-

helical_processing

-

image

-

image_processing

-

journal_citation

-

layer_lines

-

ligand

-

macromolecule

-

mask

-

metadata

-

microscopy

-

model

-

non_journal_citation

-

organelle_or_cellular_component_supramolecule

-

other_macromolecule

-

primary_map

-

protein_or_peptide

-

revision_change_sub_group

-

rna

-

saccharide

-

sample_supramolecule

-

single_particle_microscopy

-

single_particle_preparation

-

singleparticle_processing

-

specimen_preparation

-

structure_factors

-

subtomogram_averaging_microscopy

-

subtomogram_averaging_preparation

-

subtomogram_averaging_processing

-

supramolecule

-

tissue_supramolecule

-

tomography_microscopy

-

tomography_preparation

-

tomography_processing

-

validation_method

-

virus_supramolecule

-

-

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

-

Complex Types

-

-

-

admin_type

-

angle_assignment_type

-

applied_symmetry_type

-

author_ORCID_type

-

author_order_type

-

auxiliary_link_type

-

axis_type

-

background_masked_type

-

base_image_processing_type

-

base_macromolecule_type

-

base_microscopy_type

-

base_preparation_type

-

base_revision_change_type

-

base_source_type

-

base_supramolecule_type

-

buffer_component_type

-

buffer_type

-

cell_angle_type

-

cell_source_type

-

cell_supramolecule_type

-

cell_type

-

chain_type

-

classification_type

-

code_type

-

complex_revision_change_type

-

complex_source_type

-

complex_supramolecule_type

-

contact_details_type

-

crossreferences_type

-

crystal_formation_temperature_type

-

crystal_formation_time_type

-

crystal_parameters_type

-

crystallography_microscopy_type

-

crystallography_preparation_type

-

crystallography_processing_type

-

crystallography_statistics_type

-

crystallography_validation_type

-

ctf_correction_type

-

dna_macromolecule_type

-

em_label_macromolecule_type

-

emdb_cross_reference_list_type

-

emdb_cross_reference_type

-

entry_type

-

fib_current_type

-

fib_dose_rate_type

-

fib_duration_type

-

fib_final_thickness_type

-

fib_initial_thickness_type

-

fib_voltage_type

-

fiducial_marker_diameter_type

-

fiducial_marker_type

-

figure_type

-

film_type

-

final_reconstruction_type

-

fsc_curve_validation_type

-

grant_reference_type

-

grid_pretreatment_type

-

grid_type

-

helical_microscopy_type

-

helical_parameters_type

-

helical_preparation_type

-

helical_processing_type

-

integer_vector_map_type

-

interpretation_type

-

layer_lines_type

-

layer_lines_validation_type

-

ligand_macromolecule_type

-

macromolecule_list_type

-

macromolecule_source_type

-

macromolecules_and_complexes_type

-

map_statistics_type

-

map_type

-

modelling_type

-

molecular_replacement_type

-

molecular_weight_type

-

non_subtom_final_reconstruction_type

-

organelle_or_cellular_component_supramolecule_type

-

organelle_source_type

-

organism_type

-

other_db_cross_reference_list_type

-

other_db_cross_reference_type

-

other_macromolecule_type

-

part_revision_change_type

-

particle_selection_type

-

pdb_cross_reference_list_type

-

pdb_cross_reference_type

-

pdb_model_type

-

pixel_spacing_type

-

protein_or_peptide_macromolecule_type

-

recombinant_source_type

-

reconstruction_filtering_type

-

refinement_type

-

residual_tilt_type

-

revision_category_or_item_type

-

revision_history_type

-

rna_macromolecule_type

-

saccharide_macromolecule_type

-

sample_source_type

-

sample_supramolecule_type

-

sample_type

-

sci_name_type

-

segment_selection_type

-

single_particle_microscopy_type

-

single_particle_preparation_type

-

singleparticle_processing_type

-

software_list_type

-

software_type

-

specialist_optics_type

-

starting_map_type

-

structure_determination_type

-

structure_factors_validation_type

-

subtomogram_averaging_preparation_type

-

subtomogram_averaging_processing_type

-

subtomogram_final_reconstruction_type

-

supersedes_type

-

telephone_number_type

-

temperature_type

-

tilt_series_type

-

tissue_source_type

-

tissue_supramolecule_type

-

tomography_microscopy_type

-

tomography_preparation_type

-

tomography_processing_type

-

ultramicrotomy_final_thickness_type

-

unit_cell_type

-

validation_type

-

version_list_type

-

version_type

-

virus_host_type

-

virus_species_name_type

-

virus_supramolecule_type

-

vitrification_type

-

-

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

-

Simple Types

-

-

-

ORCID_type

-

allowed_acceleration_voltage

-

allowed_angle_increment

-

allowed_angle_shadowing

-

allowed_angle_tomography

-

allowed_angular_sampling

-

allowed_assembly_weights

-

allowed_average_exposure_time_type

-

allowed_brestore_type

-

allowed_c2_aperture_diameter

-

allowed_camera_length

-

allowed_cell_angle

-

allowed_cell_dim

-

allowed_concentration

-

allowed_crystal_formation_temperature_type

-

allowed_defocus_max

-

allowed_defocus_min

-

allowed_diameter_colloidal_gold

-

allowed_electron_dose

-

allowed_energy_filter_width

-

allowed_energy_window

-

allowed_film_or_detector_model

-

allowed_film_thickness

-

allowed_focus_ion_current

-

allowed_focus_ion_dose_rate

-

allowed_focus_ion_final_thickness

-

allowed_focus_ion_initial_thickness

-

allowed_focus_ion_voltage

-

allowed_humidity_vitrification

-

allowed_magnification

-

allowed_microtome_thickness

-

allowed_nominal_cs

-

allowed_pixel_sampling

-

allowed_pressure_glow_discharge

-

allowed_rise_type

-

allowed_scaning_interval

-

allowed_shell_diameter

-

allowed_temperature

-

allowed_temperature_vitrification

-

allowed_thickness_shadowing

-

allowed_tilt_angle1Orthogonal

-

allowed_tilt_angle2Orthogonal

-

allowed_tilt_angle_random_conical

-

allowed_time_glow_discharge

-

allowed_twist_type

-

author_enums

-

author_type

-

chain_pdb_id

-

complex_category_type

-

correction_space_type

-

emdb_id_type

-

formula_type

-

map_data_type

-

non_zero_float

-

page_type

-

pdb_code_type

-

point_group_symmetry_type

-

pos_int_or_string_type

-

reconstruction_algorithm_type

-

resolution_type

-

revision_history_version_type

-

status_code_type

-

-

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

	- Element Groups -
	- - crystallography_proc_add_group - helical_processing_add_group - single_particle_proc_add_group - subtomogram_averaging_proc_add_group - tomography_proc_add_group - -

-

-

-

-

-

-

-

-

- - \ No newline at end of file diff --git a/emdb_schemas/current/doc/Untitled.indexListcomp.html b/emdb_schemas/current/doc/Untitled.indexListcomp.html deleted file mode 100644 index b5853c3..0000000 --- a/emdb_schemas/current/doc/Untitled.indexListcomp.html +++ /dev/null @@ -1,696 +0,0 @@ - - - - - Schema documentation for - - -

Table of Contents

-

- -

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

	- Main Schema -
	- - emdb.xsd - -

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

-

Elements

-

-

-

additional_map

-

cell_supramolecule

-

citation_type

-

complex_supramolecule

-

crystallography_microscopy

-

crystallography_preparation

-

crystallography_processing

-

crystallography_validation

-

dna

-

em_label

-

emd

-

fsc

-

fsc_curve

-

half_map

-

helical_microscopy

-

helical_preparation

-

helical_processing

-

image

-

image_processing

-

journal_citation

-

layer_lines

-

ligand

-

macromolecule

-

mask

-

metadata

-

microscopy

-

model

-

non_journal_citation

-

organelle_or_cellular_component_supramolecule

-

other_macromolecule

-

primary_map

-

protein_or_peptide

-

revision_change_sub_group

-

rna

-

saccharide

-

sample_supramolecule

-

single_particle_microscopy

-

single_particle_preparation

-

singleparticle_processing

-

specimen_preparation

-

structure_factors

-

subtomogram_averaging_microscopy

-

subtomogram_averaging_preparation

-

subtomogram_averaging_processing

-

supramolecule

-

tissue_supramolecule

-

tomography_microscopy

-

tomography_preparation

-

tomography_processing

-

validation_method

-

virus_supramolecule

-

-

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

-

Complex Types

-

-

-

admin_type

-

angle_assignment_type

-

applied_symmetry_type

-

author_ORCID_type

-

author_order_type

-

auxiliary_link_type

-

axis_type

-

background_masked_type

-

base_image_processing_type

-

base_macromolecule_type

-

base_microscopy_type

-

base_preparation_type

-

base_revision_change_type

-

base_source_type

-

base_supramolecule_type

-

buffer_component_type

-

buffer_type

-

cell_angle_type

-

cell_source_type

-

cell_supramolecule_type

-

cell_type

-

chain_type

-

classification_type

-

code_type

-

complex_revision_change_type

-

complex_source_type

-

complex_supramolecule_type

-

contact_details_type

-

crossreferences_type

-

crystal_formation_temperature_type

-

crystal_formation_time_type

-

crystal_parameters_type

-

crystallography_microscopy_type

-

crystallography_preparation_type

-

crystallography_processing_type

-

crystallography_statistics_type

-

crystallography_validation_type

-

ctf_correction_type

-

dna_macromolecule_type

-

em_label_macromolecule_type

-

emdb_cross_reference_list_type

-

emdb_cross_reference_type

-

entry_type

-

fib_current_type

-

fib_dose_rate_type

-

fib_duration_type

-

fib_final_thickness_type

-

fib_initial_thickness_type

-

fib_voltage_type

-

fiducial_marker_diameter_type

-

fiducial_marker_type

-

figure_type

-

film_type

-

final_reconstruction_type

-

fsc_curve_validation_type

-

grant_reference_type

-

grid_pretreatment_type

-

grid_type

-

helical_microscopy_type

-

helical_parameters_type

-

helical_preparation_type

-

helical_processing_type

-

integer_vector_map_type

-

interpretation_type

-

layer_lines_type

-

layer_lines_validation_type

-

ligand_macromolecule_type

-

macromolecule_list_type

-

macromolecule_source_type

-

macromolecules_and_complexes_type

-

map_statistics_type

-

map_type

-

modelling_type

-

molecular_replacement_type

-

molecular_weight_type

-

non_subtom_final_reconstruction_type

-

organelle_or_cellular_component_supramolecule_type

-

organelle_source_type

-

organism_type

-

other_db_cross_reference_list_type

-

other_db_cross_reference_type

-

other_macromolecule_type

-

part_revision_change_type

-

particle_selection_type

-

pdb_cross_reference_list_type

-

pdb_cross_reference_type

-

pdb_model_type

-

pixel_spacing_type

-

protein_or_peptide_macromolecule_type

-

recombinant_source_type

-

reconstruction_filtering_type

-

refinement_type

-

residual_tilt_type

-

revision_category_or_item_type

-

revision_history_type

-

rna_macromolecule_type

-

saccharide_macromolecule_type

-

sample_source_type

-

sample_supramolecule_type

-

sample_type

-

sci_name_type

-

segment_selection_type

-

single_particle_microscopy_type

-

single_particle_preparation_type

-

singleparticle_processing_type

-

software_list_type

-

software_type

-

specialist_optics_type

-

starting_map_type

-

structure_determination_type

-

structure_factors_validation_type

-

subtomogram_averaging_preparation_type

-

subtomogram_averaging_processing_type

-

subtomogram_final_reconstruction_type

-

supersedes_type

-

telephone_number_type

-

temperature_type

-

tilt_series_type

-

tissue_source_type

-

tissue_supramolecule_type

-

tomography_microscopy_type

-

tomography_preparation_type

-

tomography_processing_type

-

ultramicrotomy_final_thickness_type

-

unit_cell_type

-

validation_type

-

version_list_type

-

version_type

-

virus_host_type

-

virus_species_name_type

-

virus_supramolecule_type

-

vitrification_type

-

-

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

-

Simple Types

-

-

-

ORCID_type

-

allowed_acceleration_voltage

-

allowed_angle_increment

-

allowed_angle_shadowing

-

allowed_angle_tomography

-

allowed_angular_sampling

-

allowed_assembly_weights

-

allowed_average_exposure_time_type

-

allowed_brestore_type

-

allowed_c2_aperture_diameter

-

allowed_camera_length

-

allowed_cell_angle

-

allowed_cell_dim

-

allowed_concentration

-

allowed_crystal_formation_temperature_type

-

allowed_defocus_max

-

allowed_defocus_min

-

allowed_diameter_colloidal_gold

-

allowed_electron_dose

-

allowed_energy_filter_width

-

allowed_energy_window

-

allowed_film_or_detector_model

-

allowed_film_thickness

-

allowed_focus_ion_current

-

allowed_focus_ion_dose_rate

-

allowed_focus_ion_final_thickness

-

allowed_focus_ion_initial_thickness

-

allowed_focus_ion_voltage

-

allowed_humidity_vitrification

-

allowed_magnification

-

allowed_microtome_thickness

-

allowed_nominal_cs

-

allowed_pixel_sampling

-

allowed_pressure_glow_discharge

-

allowed_rise_type

-

allowed_scaning_interval

-

allowed_shell_diameter

-

allowed_temperature

-

allowed_temperature_vitrification

-

allowed_thickness_shadowing

-

allowed_tilt_angle1Orthogonal

-

allowed_tilt_angle2Orthogonal

-

allowed_tilt_angle_random_conical

-

allowed_time_glow_discharge

-

allowed_twist_type

-

author_enums

-

author_type

-

chain_pdb_id

-

complex_category_type

-

correction_space_type

-

emdb_id_type

-

formula_type

-

map_data_type

-

non_zero_float

-

page_type

-

pdb_code_type

-

point_group_symmetry_type

-

pos_int_or_string_type

-

reconstruction_algorithm_type

-

resolution_type

-

revision_history_version_type

-

status_code_type

-

-

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

	- Element Groups -
	- - crystallography_proc_add_group - helical_processing_add_group - single_particle_proc_add_group - subtomogram_averaging_proc_add_group - tomography_proc_add_group - -

-

-

-

-

-

-

- - - \ No newline at end of file diff --git a/emdb_schemas/current/doc/Untitled.indexListns.html b/emdb_schemas/current/doc/Untitled.indexListns.html deleted file mode 100644 index 8cb29e0..0000000 --- a/emdb_schemas/current/doc/Untitled.indexListns.html +++ /dev/null @@ -1,701 +0,0 @@ - - - - - Schema documentation for - - -

Table of Contents

-

- -

-

-

-

No namespace

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

	- Main Schema -
	- - emdb.xsd - -

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

-

Elements

-

-

-

additional_map

-

cell_supramolecule

-

citation_type

-

complex_supramolecule

-

crystallography_microscopy

-

crystallography_preparation

-

crystallography_processing

-

crystallography_validation

-

dna

-

em_label

-

emd

-

fsc

-

fsc_curve

-

half_map

-

helical_microscopy

-

helical_preparation

-

helical_processing

-

image

-

image_processing

-

journal_citation

-

layer_lines

-

ligand

-

macromolecule

-

mask

-

metadata

-

microscopy

-

model

-

non_journal_citation

-

organelle_or_cellular_component_supramolecule

-

other_macromolecule

-

primary_map

-

protein_or_peptide

-

revision_change_sub_group

-

rna

-

saccharide

-

sample_supramolecule

-

single_particle_microscopy

-

single_particle_preparation

-

singleparticle_processing

-

specimen_preparation

-

structure_factors

-

subtomogram_averaging_microscopy

-

subtomogram_averaging_preparation

-

subtomogram_averaging_processing

-

supramolecule

-

tissue_supramolecule

-

tomography_microscopy

-

tomography_preparation

-

tomography_processing

-

validation_method

-

virus_supramolecule

-

-

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

-

Complex Types

-

-

-

admin_type

-

angle_assignment_type

-

applied_symmetry_type

-

author_ORCID_type

-

author_order_type

-

auxiliary_link_type

-

axis_type

-

background_masked_type

-

base_image_processing_type

-

base_macromolecule_type

-

base_microscopy_type

-

base_preparation_type

-

base_revision_change_type

-

base_source_type

-

base_supramolecule_type

-

buffer_component_type

-

buffer_type

-

cell_angle_type

-

cell_source_type

-

cell_supramolecule_type

-

cell_type

-

chain_type

-

classification_type

-

code_type

-

complex_revision_change_type

-

complex_source_type

-

complex_supramolecule_type

-

contact_details_type

-

crossreferences_type

-

crystal_formation_temperature_type

-

crystal_formation_time_type

-

crystal_parameters_type

-

crystallography_microscopy_type

-

crystallography_preparation_type

-

crystallography_processing_type

-

crystallography_statistics_type

-

crystallography_validation_type

-

ctf_correction_type

-

dna_macromolecule_type

-

em_label_macromolecule_type

-

emdb_cross_reference_list_type

-

emdb_cross_reference_type

-

entry_type

-

fib_current_type

-

fib_dose_rate_type

-

fib_duration_type

-

fib_final_thickness_type

-

fib_initial_thickness_type

-

fib_voltage_type

-

fiducial_marker_diameter_type

-

fiducial_marker_type

-

figure_type

-

film_type

-

final_reconstruction_type

-

fsc_curve_validation_type

-

grant_reference_type

-

grid_pretreatment_type

-

grid_type

-

helical_microscopy_type

-

helical_parameters_type

-

helical_preparation_type

-

helical_processing_type

-

integer_vector_map_type

-

interpretation_type

-

layer_lines_type

-

layer_lines_validation_type

-

ligand_macromolecule_type

-

macromolecule_list_type

-

macromolecule_source_type

-

macromolecules_and_complexes_type

-

map_statistics_type

-

map_type

-

modelling_type

-

molecular_replacement_type

-

molecular_weight_type

-

non_subtom_final_reconstruction_type

-

organelle_or_cellular_component_supramolecule_type

-

organelle_source_type

-

organism_type

-

other_db_cross_reference_list_type

-

other_db_cross_reference_type

-

other_macromolecule_type

-

part_revision_change_type

-

particle_selection_type

-

pdb_cross_reference_list_type

-

pdb_cross_reference_type

-

pdb_model_type

-

pixel_spacing_type

-

protein_or_peptide_macromolecule_type

-

recombinant_source_type

-

reconstruction_filtering_type

-

refinement_type

-

residual_tilt_type

-

revision_category_or_item_type

-

revision_history_type

-

rna_macromolecule_type

-

saccharide_macromolecule_type

-

sample_source_type

-

sample_supramolecule_type

-

sample_type

-

sci_name_type

-

segment_selection_type

-

single_particle_microscopy_type

-

single_particle_preparation_type

-

singleparticle_processing_type

-

software_list_type

-

software_type

-

specialist_optics_type

-

starting_map_type

-

structure_determination_type

-

structure_factors_validation_type

-

subtomogram_averaging_preparation_type

-

subtomogram_averaging_processing_type

-

subtomogram_final_reconstruction_type

-

supersedes_type

-

telephone_number_type

-

temperature_type

-

tilt_series_type

-

tissue_source_type

-

tissue_supramolecule_type

-

tomography_microscopy_type

-

tomography_preparation_type

-

tomography_processing_type

-

ultramicrotomy_final_thickness_type

-

unit_cell_type

-

validation_type

-

version_list_type

-

version_type

-

virus_host_type

-

virus_species_name_type

-

virus_supramolecule_type

-

vitrification_type

-

-

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

-

Simple Types

-

-

-

ORCID_type

-

allowed_acceleration_voltage

-

allowed_angle_increment

-

allowed_angle_shadowing

-

allowed_angle_tomography

-

allowed_angular_sampling

-

allowed_assembly_weights

-

allowed_average_exposure_time_type

-

allowed_brestore_type

-

allowed_c2_aperture_diameter

-

allowed_camera_length

-

allowed_cell_angle

-

allowed_cell_dim

-

allowed_concentration

-

allowed_crystal_formation_temperature_type

-

allowed_defocus_max

-

allowed_defocus_min

-

allowed_diameter_colloidal_gold

-

allowed_electron_dose

-

allowed_energy_filter_width

-

allowed_energy_window

-

allowed_film_or_detector_model

-

allowed_film_thickness

-

allowed_focus_ion_current

-

allowed_focus_ion_dose_rate

-

allowed_focus_ion_final_thickness

-

allowed_focus_ion_initial_thickness

-

allowed_focus_ion_voltage

-

allowed_humidity_vitrification

-

allowed_magnification

-

allowed_microtome_thickness

-

allowed_nominal_cs

-

allowed_pixel_sampling

-

allowed_pressure_glow_discharge

-

allowed_rise_type

-

allowed_scaning_interval

-

allowed_shell_diameter

-

allowed_temperature

-

allowed_temperature_vitrification

-

allowed_thickness_shadowing

-

allowed_tilt_angle1Orthogonal

-

allowed_tilt_angle2Orthogonal

-

allowed_tilt_angle_random_conical

-

allowed_time_glow_discharge

-

allowed_twist_type

-

author_enums

-

author_type

-

chain_pdb_id

-

complex_category_type

-

correction_space_type

-

emdb_id_type

-

formula_type

-

map_data_type

-

non_zero_float

-

page_type

-

pdb_code_type

-

point_group_symmetry_type

-

pos_int_or_string_type

-

reconstruction_algorithm_type

-

resolution_type

-

revision_history_version_type

-

status_code_type

-

-

-

-

-

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

	- Element Groups -
	- - crystallography_proc_add_group - helical_processing_add_group - single_particle_proc_add_group - subtomogram_averaging_proc_add_group - tomography_proc_add_group - -

-

-

-

-

-

-

-

-

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- - - - - - - - - - - - - - - - -

-

Showing:

- - - - - - - - - - - - - - - - - - - - - - - - - -

Attributes

Diagrams

Facets

Instances

Model

Properties

Source

Used by

-

-

-

Main schema emdb.xsd

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - - - - - -

attribute form default	unqualified
element form default	unqualified

-

-

-

Element emd

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

entry_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

admin , crossreferences , sample , structure_determination_list , map , interpretation{0,1} , validation{0,1}

-

Children

admin, crossreferences, interpretation, map, sample, structure_determination_list, validation

-

Instance

-

-

-

- - - - -

-

<emd emdb_id="" version="3.0.10.0">
-  <admin composite_map="">{1,1}</admin>
-  <crossreferences>{1,1}</crossreferences>
-  <sample>{1,1}</sample>
-  <structure_determination_list>{1,1}</structure_determination_list>
-  <map format="CCP4" size_kbytes="">{1,1}</map>
-  <interpretation>{0,1}</interpretation>
-  <validation>{0,1}</validation>
-</emd>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
emdb_id	emdb_id_type		required	- -
version	xs:token	3.0.10.0	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="emd" type="entry_type"/>

-

-

-

-

Element entry_type / admin

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

admin_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

status_history_list{0,1} , current_status , revision_history{0,1} , sites , key_dates , obsolete_list{0,1} , superseded_by_list{0,1} , grant_support{0,1} , microscopy_center{0,1} , contact_author* , title , authors_list , details{0,1} , keywords{0,1} , replace_existing_entry{0,1}

-

Children

authors_list, contact_author, current_status, details, grant_support, key_dates, keywords, microscopy_center, obsolete_list, replace_existing_entry, revision_history, sites, status_history_list, superseded_by_list, title

-

Instance

-

-

-

- - - - -

-

<admin composite_map="">
-  <status_history_list>{0,1}</status_history_list>
-  <current_status>{1,1}</current_status>
-  <revision_history>{0,1}</revision_history>
-  <sites>{1,1}</sites>
-  <key_dates>{1,1}</key_dates>
-  <obsolete_list>{0,1}</obsolete_list>
-  <superseded_by_list>{0,1}</superseded_by_list>
-  <grant_support>{0,1}</grant_support>
-  <microscopy_center>{0,1}</microscopy_center>
-  <contact_author private="true">{0,unbounded}</contact_author>
-  <title>{1,1}</title>
-  <authors_list>{1,1}</authors_list>
-  <details>{0,1}</details>
-  <keywords>{0,1}</keywords>
-  <replace_existing_entry>{0,1}</replace_existing_entry>
-</admin>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
composite_map	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="admin" type="admin_type"/>

-

-

-

-

Element admin_type / status_history_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

version_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

status+

-

Children

status

-

Instance

-

-

-

- - - - -

-

<status_history_list>
-  <status status_id="">{1,unbounded}</status>
-</status_history_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="status_history_list" type="version_list_type" minOccurs="0"/>

-

-

-

-

Element version_list_type / status

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of version_type

Type hierarchy

-

version_type

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

date{0,1} , code , processing_site{0,1} , annotator{0,1} , details{0,1}

-

Children

annotator, code, date, details, processing_site

-

Instance

-

-

-

- - - - -

-

<status status_id="">
-  <date>{0,1}</date>
-  <code superseded="" supersedes="">{1,1}</code>
-  <processing_site>{0,1}</processing_site>
-  <annotator private="true">{0,1}</annotator>
-  <details>{0,1}</details>
-</status>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
status_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="status" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:complexContent>
-      <xs:extension base="version_type">
-        <xs:attribute name="status_id" type="xs:positiveInteger" use="required"/>
-      </xs:extension>
-    </xs:complexContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element version_type / date

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:date

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - -

minInclusive

2002-01-01

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="date" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:date">
-      <xs:minInclusive value="2002-01-01"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element version_type / code

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

code_type

Type hierarchy

-

xs:token
- status_code_type
  - code_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
superseded	xs:boolean	optional	- -
supersedes	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="code" type="code_type"/>

-

-

-

-

Element version_type / processing_site

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	PDBe	- -
enumeration	RCSB	- -
enumeration	PDBj	- -
enumeration	PDBc	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="processing_site" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PDBe"/>
-      <xs:enumeration value="RCSB"/>
-      <xs:enumeration value="PDBj"/>
-      <xs:enumeration value="PDBc"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element version_type / annotator

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
private	xs:token	true	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="annotator" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="private" type="xs:token" fixed="true" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element version_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element admin_type / current_status

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

version_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

date{0,1} , code , processing_site{0,1} , annotator{0,1} , details{0,1}

-

Children

annotator, code, date, details, processing_site

-

Instance

-

-

-

- - - - -

-

<current_status>
-  <date>{0,1}</date>
-  <code superseded="" supersedes="">{1,1}</code>
-  <processing_site>{0,1}</processing_site>
-  <annotator private="true">{0,1}</annotator>
-  <details>{0,1}</details>
-</current_status>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="current_status" type="version_type"/>

-

-

-

-

Element admin_type / revision_history

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

revision+

-

Children

revision

-

Instance

-

-

-

- - - - -

-

<revision_history>
-  <revision date="" version="">{1,unbounded}</revision>
-</revision_history>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="revision_history">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="revision" type="revision_history_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element admin_type / revision_history / revision

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

revision_history_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

change_list

-

Children

change_list

-

Instance

-

-

-

- - - - -

-

<revision date="" version="">
-  <change_list>{1,1}</change_list>
-</revision>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
date	xs:date	required	- -
version	revision_history_version_type	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="revision" type="revision_history_type" maxOccurs="unbounded"/>

-

-

-

-

Element revision_history_type / change_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	1

-

-

Model

-

-

revision_change_sub_group+

-

Children

revision_change_sub_group

-

Instance

-

-

-

- - - - -

-

<change_list>
-  <revision_change_sub_group>{1,unbounded}</revision_change_sub_group>
-</change_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="change_list" maxOccurs="1">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element ref="revision_change_sub_group" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element revision_change_sub_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

base_revision_change_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
abstract	true

-

-

Substitution Group

-

primary_map
image
half_map
mask
fsc
additional_map
model
metadata

-

-

Used by

-

-

-

- - - - - -

Element

revision_history_type/change_list

-

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}

-

Children

description, details, provider, revision_group, revision_type

-

Instance

-

-

-

- - - - -

-

<revision_change_sub_group>
-  <revision_type>{1,1}</revision_type>
-  <provider>{1,1}</provider>
-  <description>{0,1}</description>
-  <details>{0,1}</details>
-  <revision_group>{0,1}</revision_group>
-</revision_change_sub_group>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="revision_change_sub_group" type="base_revision_change_type" abstract="true"/>

-

-

-

-

Element base_revision_change_type / revision_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	INITIAL_RELEASE	- -
enumeration	COORDINATE_REPLACEMENT	- -
enumeration	OBSOLETE	- -
enumeration	REMEDIATION	- -
enumeration	DATA_ADDED	- -
enumeration	DATA_UPDATED	- -
enumeration	DATA_REMOVED	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="revision_type">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="INITIAL_RELEASE"/>
-      <xs:enumeration value="COORDINATE_REPLACEMENT"/>
-      <xs:enumeration value="OBSOLETE"/>
-      <xs:enumeration value="REMEDIATION"/>
-      <xs:enumeration value="DATA_ADDED"/>
-      <xs:enumeration value="DATA_UPDATED"/>
-      <xs:enumeration value="DATA_REMOVED"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_revision_change_type / provider

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	REPOSITORY	- -
enumeration	AUTHOR	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="provider">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="REPOSITORY"/>
-      <xs:enumeration value="AUTHOR"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_revision_change_type / description

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="description" type="xs:token" minOccurs="0"/>

-

-

-

-

Element base_revision_change_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:token" minOccurs="0"/>

-

-

-

-

Element base_revision_change_type / revision_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	EXPERIMENTAL_DATA	- -
enumeration	DERIVED_DATA	- -
enumeration	EXPERIMENTAL_SUMMARY	- -
enumeration	EXPERIMENTAL_PREPARATION	- -
enumeration	DATABASE_REFERENCES	- -
enumeration	DATA_COLLECTION	- -
enumeration	ADVISORY	- -
enumeration	SOURCE_AND_TAXONOMY	- -
enumeration	REFINEMENT_DESCRIPTION	- -
enumeration	DATA_PROCESSING	- -
enumeration	STRUCTURE_SUMMARY	- -
enumeration	VERSION_FORMAT_COMPLIANCE	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="revision_group" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="EXPERIMENTAL_DATA"/>
-      <xs:enumeration value="DERIVED_DATA"/>
-      <xs:enumeration value="EXPERIMENTAL_SUMMARY"/>
-      <xs:enumeration value="EXPERIMENTAL_PREPARATION"/>
-      <xs:enumeration value="DATABASE_REFERENCES"/>
-      <xs:enumeration value="DATA_COLLECTION"/>
-      <xs:enumeration value="ADVISORY"/>
-      <xs:enumeration value="SOURCE_AND_TAXONOMY"/>
-      <xs:enumeration value="REFINEMENT_DESCRIPTION"/>
-      <xs:enumeration value="DATA_PROCESSING"/>
-      <xs:enumeration value="STRUCTURE_SUMMARY"/>
-      <xs:enumeration value="VERSION_FORMAT_COMPLIANCE"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element admin_type / sites

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

deposition , last_processing

-

Children

deposition, last_processing

-

Instance

-

-

-

- - - - -

-

<sites>
-  <deposition>{1,1}</deposition>
-  <last_processing>{1,1}</last_processing>
-</sites>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sites">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="deposition">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="PDBe"/>
-            <xs:enumeration value="PDBj"/>
-            <xs:enumeration value="RCSB"/>
-            <xs:enumeration value="PDBc"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="last_processing">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="PDBe"/>
-            <xs:enumeration value="PDBj"/>
-            <xs:enumeration value="RCSB"/>
-            <xs:enumeration value="PDBc"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element admin_type / sites / deposition

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	PDBe	- -
enumeration	PDBj	- -
enumeration	RCSB	- -
enumeration	PDBc	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="deposition">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PDBe"/>
-      <xs:enumeration value="PDBj"/>
-      <xs:enumeration value="RCSB"/>
-      <xs:enumeration value="PDBc"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element admin_type / sites / last_processing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	PDBe	- -
enumeration	PDBj	- -
enumeration	RCSB	- -
enumeration	PDBc	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="last_processing">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PDBe"/>
-      <xs:enumeration value="PDBj"/>
-      <xs:enumeration value="RCSB"/>
-      <xs:enumeration value="PDBc"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element admin_type / key_dates

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

deposition , header_release{0,1} , map_release{0,1} , obsolete{0,1} , update

-

Children

deposition, header_release, map_release, obsolete, update

-

Instance

-

-

-

- - - - -

-

<key_dates>
-  <deposition>{1,1}</deposition>
-  <header_release>{0,1}</header_release>
-  <map_release>{0,1}</map_release>
-  <obsolete>{0,1}</obsolete>
-  <update>{1,1}</update>
-</key_dates>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="key_dates">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="deposition" type="xs:date"/>
-      <xs:element name="header_release" type="xs:date" minOccurs="0"/>
-      <xs:element name="map_release" type="xs:date" minOccurs="0"/>
-      <xs:element name="obsolete" type="xs:date" minOccurs="0"/>
-      <xs:element name="update" type="xs:date"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element admin_type / key_dates / deposition

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:date

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="deposition" type="xs:date"/>

-

-

-

-

Element admin_type / key_dates / header_release

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:date

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="header_release" type="xs:date" minOccurs="0"/>

-

-

-

-

Element admin_type / key_dates / map_release

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:date

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="map_release" type="xs:date" minOccurs="0"/>

-

-

-

-

Element admin_type / key_dates / obsolete

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:date

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="obsolete" type="xs:date" minOccurs="0"/>

-

-

-

-

Element admin_type / key_dates / update

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:date

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="update" type="xs:date"/>

-

-

-

-

Element admin_type / obsolete_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

entry+

-

Children

entry

-

Instance

-

-

-

- - - - -

-

<obsolete_list>
-  <entry>{1,unbounded}</entry>
-</obsolete_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="obsolete_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="entry" type="supersedes_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element admin_type / obsolete_list / entry

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

supersedes_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

date , entry , details{0,1}

-

Children

date, details, entry

-

Instance

-

-

-

- - - - -

-

<entry>
-  <date>{1,1}</date>
-  <entry>{1,1}</entry>
-  <details>{0,1}</details>
-</entry>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="entry" type="supersedes_type" maxOccurs="unbounded"/>

-

-

-

-

Element supersedes_type / date

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:date

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="date" type="xs:date"/>

-

-

-

-

Element supersedes_type / entry

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

emdb_id_type

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

EMD-\d{4,}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="entry" type="emdb_id_type"/>

-

-

-

-

Element supersedes_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element admin_type / superseded_by_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

entry+

-

Children

entry

-

Instance

-

-

-

- - - - -

-

<superseded_by_list>
-  <entry>{1,unbounded}</entry>
-</superseded_by_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="superseded_by_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="entry" type="supersedes_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element admin_type / superseded_by_list / entry

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

supersedes_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

date , entry , details{0,1}

-

Children

date, details, entry

-

Instance

-

-

-

- - - - -

-

<entry>
-  <date>{1,1}</date>
-  <entry>{1,1}</entry>
-  <details>{0,1}</details>
-</entry>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="entry" type="supersedes_type" maxOccurs="unbounded"/>

-

-

-

-

Element admin_type / grant_support

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

grant_reference+

-

Children

grant_reference

-

Instance

-

-

-

- - - - -

-

<grant_support>
-  <grant_reference>{1,unbounded}</grant_reference>
-</grant_support>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="grant_support" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="grant_reference" type="grant_reference_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element admin_type / grant_support / grant_reference

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

grant_reference_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

funding_body , code{0,1} , country{0,1}

-

Children

code, country, funding_body

-

Instance

-

-

-

- - - - -

-

<grant_reference>
-  <funding_body>{1,1}</funding_body>
-  <code>{0,1}</code>
-  <country>{0,1}</country>
-</grant_reference>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="grant_reference" type="grant_reference_type" maxOccurs="unbounded"/>

-

-

-

-

Element grant_reference_type / funding_body

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="funding_body" type="xs:token"/>

-

-

-

-

Element grant_reference_type / code

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="code" type="xs:token" minOccurs="0"/>

-

-

-

-

Element grant_reference_type / country

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="country" type="xs:token" minOccurs="0"/>

-

-

-

-

Element admin_type / microscopy_center

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

name , country

-

Children

country, name

-

Instance

-

-

-

- - - - -

-

<microscopy_center>
-  <name>{1,1}</name>
-  <country>{1,1}</country>
-</microscopy_center>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="microscopy_center" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="name">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="MICRO_CENTER_1"/>
-            <xs:enumeration value="MICRO_CENTER_2"/>
-            <xs:enumeration value="MICRO_CENTER_3"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="country">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="UK"/>
-            <xs:enumeration value="USA"/>
-            <xs:enumeration value="Japan"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element admin_type / microscopy_center / name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	MICRO_CENTER_1	- -
enumeration	MICRO_CENTER_2	- -
enumeration	MICRO_CENTER_3	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="name">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="MICRO_CENTER_1"/>
-      <xs:enumeration value="MICRO_CENTER_2"/>
-      <xs:enumeration value="MICRO_CENTER_3"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element admin_type / microscopy_center / country

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	UK	- -
enumeration	USA	- -
enumeration	Japan	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="country">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="UK"/>
-      <xs:enumeration value="USA"/>
-      <xs:enumeration value="Japan"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element admin_type / contact_author

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of contact_details_type

Type hierarchy

-

contact_details_type

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

role , title , first_name , middle_name , last_name , organization , street , town_or_city , state_or_province , country , post_or_zip_code , email , telephone , fax

-

Children

country, email, fax, first_name, last_name, middle_name, organization, post_or_zip_code, role, state_or_province, street, telephone, title, town_or_city

-

Instance

-

-

-

- - - - -

-

<contact_author private="true">
-  <role>{1,1}</role>
-  <title>{1,1}</title>
-  <first_name>{1,1}</first_name>
-  <middle_name>{1,1}</middle_name>
-  <last_name>{1,1}</last_name>
-  <organization type="">{1,1}</organization>
-  <street>{1,1}</street>
-  <town_or_city>{1,1}</town_or_city>
-  <state_or_province>{1,1}</state_or_province>
-  <country>{1,1}</country>
-  <post_or_zip_code>{1,1}</post_or_zip_code>
-  <email>{1,1}</email>
-  <telephone>{1,1}</telephone>
-  <fax>{1,1}</fax>
-</contact_author>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
private		true	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="contact_author" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:complexContent>
-      <xs:extension base="contact_details_type">
-        <xs:attribute name="private" fixed="true" use="required"/>
-      </xs:extension>
-    </xs:complexContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element contact_details_type / role

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	INVESTIGATOR	- -
enumeration	PRINCIPAL INVESTIGATOR/GROUP LEADER	- -
enumeration	RESPONSIBLE SCIENTIST	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="role">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="INVESTIGATOR"/>
-      <xs:enumeration value="PRINCIPAL INVESTIGATOR/GROUP LEADER"/>
-      <xs:enumeration value="RESPONSIBLE SCIENTIST"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element contact_details_type / title

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	DR.	- -
enumeration	MR.	- -
enumeration	MRS.	- -
enumeration	MS.	- -
enumeration	PROF.	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="title">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="DR."/>
-      <xs:enumeration value="MR."/>
-      <xs:enumeration value="MRS."/>
-      <xs:enumeration value="MS."/>
-      <xs:enumeration value="PROF."/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element contact_details_type / first_name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="first_name" type="xs:token"/>

-

-

-

-

Element contact_details_type / middle_name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[A-Z]

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="middle_name">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="[A-Z]"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element contact_details_type / last_name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="last_name" type="xs:token"/>

-

-

-

-

Element contact_details_type / organization

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organization">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="ACADEMIC"/>
-              <xs:enumeration value="COMMERCIAL"/>
-              <xs:enumeration value="GOVERMENT"/>
-              <xs:enumeration value="OTHER"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element contact_details_type / street

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="street" type="xs:string"/>

-

-

-

-

Element contact_details_type / town_or_city

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="town_or_city" type="xs:token"/>

-

-

-

-

Element contact_details_type / state_or_province

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="state_or_province" type="xs:token"/>

-

-

-

-

Element contact_details_type / country

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="country" type="xs:token"/>

-

-

-

-

Element contact_details_type / post_or_zip_code

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="post_or_zip_code" type="xs:token"/>

-

-

-

-

Element contact_details_type / email

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[A-Za-z0-9._%+-]+@[A-Za-z0-9.-]+\.[A-Za-z]{2,4}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="email">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="[A-Za-z0-9._%+-]+@[A-Za-z0-9.-]+\.[A-Za-z]{2,4}"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element contact_details_type / telephone

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

telephone_number_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

country , area , local

-

Children

area, country, local

-

Instance

-

-

-

- - - - -

-

<telephone>
-  <country>{1,1}</country>
-  <area>{1,1}</area>
-  <local>{1,1}</local>
-</telephone>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="telephone" type="telephone_number_type"/>

-

-

-

-

Element telephone_number_type / country

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d{1,3}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="country">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="\d{1,3}"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element telephone_number_type / area

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d{2,5}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="area">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="\d{2,5}"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element telephone_number_type / local

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d+( ext. \d+)?

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="local">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="\d+( ext. \d+)?"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element contact_details_type / fax

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

telephone_number_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

country , area , local

-

Children

area, country, local

-

Instance

-

-

-

- - - - -

-

<fax>
-  <country>{1,1}</country>
-  <area>{1,1}</area>
-  <local>{1,1}</local>
-</fax>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="fax" type="telephone_number_type"/>

-

-

-

-

Element admin_type / title

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="title" type="xs:token"/>

-

-

-

-

Element admin_type / authors_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

author+

-

Children

author

-

Instance

-

-

-

- - - - -

-

<authors_list>
-  <author ORCID="">{1,unbounded}</author>
-</authors_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="authors_list">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="author" type="author_ORCID_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element admin_type / authors_list / author

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

author_ORCID_type

Type hierarchy

-

xs:anySimpleType
- author_type
  - author_ORCID_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
ORCID	ORCID_type	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="author" type="author_ORCID_type" maxOccurs="unbounded"/>

-

-

-

-

Element admin_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:token" minOccurs="0"/>

-

-

-

-

Element admin_type / keywords

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="keywords" type="xs:string" minOccurs="0"/>

-

-

-

-

Element admin_type / replace_existing_entry

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="replace_existing_entry" type="xs:boolean" minOccurs="0"/>

-

-

-

-

Element entry_type / crossreferences

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crossreferences_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

citation_list , emdb_list{0,1} , pdb_list{0,1} , other_db_list{0,1} , auxiliary_link_list{0,1}

-

Children

auxiliary_link_list, citation_list, emdb_list, other_db_list, pdb_list

-

Instance

-

-

-

- - - - -

-

<crossreferences>
-  <citation_list>{1,1}</citation_list>
-  <emdb_list>{0,1}</emdb_list>
-  <pdb_list>{0,1}</pdb_list>
-  <other_db_list>{0,1}</other_db_list>
-  <auxiliary_link_list>{0,1}</auxiliary_link_list>
-</crossreferences>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crossreferences" type="crossreferences_type"/>

-

-

-

-

Element crossreferences_type / citation_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

primary_citation , secondary_citation*

-

Children

primary_citation, secondary_citation

-

Instance

-

-

-

- - - - -

-

<citation_list>
-  <primary_citation>{1,1}</primary_citation>
-  <secondary_citation>{0,unbounded}</secondary_citation>
-</citation_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="citation_list">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="primary_citation">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element ref="citation_type"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="secondary_citation" minOccurs="0" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element ref="citation_type"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crossreferences_type / citation_list / primary_citation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

citation_type

-

Children

citation_type

-

Instance

-

-

-

- - - - -

-

<primary_citation>
-  <citation_type>{1,1}</citation_type>
-</primary_citation>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="primary_citation">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element ref="citation_type"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element citation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

abstract

true

-

-

Substitution Group

-

journal_citation
non_journal_citation

-

-

Used by

-

-

-

- - - - - -

Elements

crossreferences_type/citation_list/primary_citation, crossreferences_type/citation_list/secondary_citation

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="citation_type" abstract="true"/>

-

-

-

-

Element crossreferences_type / citation_list / secondary_citation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

citation_type

-

Children

citation_type

-

Instance

-

-

-

- - - - -

-

<secondary_citation>
-  <citation_type>{1,1}</citation_type>
-</secondary_citation>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="secondary_citation" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element ref="citation_type"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crossreferences_type / emdb_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

emdb_cross_reference_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

emdb_reference+

-

Children

emdb_reference

-

Instance

-

-

-

- - - - -

-

<emdb_list>
-  <emdb_reference>{1,unbounded}</emdb_reference>
-</emdb_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="emdb_list" type="emdb_cross_reference_list_type" minOccurs="0"/>

-

-

-

-

Element emdb_cross_reference_list_type / emdb_reference

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

emdb_cross_reference_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

emdb_id , relationship{0,1} , details{0,1}

-

Children

details, emdb_id, relationship

-

Instance

-

-

-

- - - - -

-

<emdb_reference>
-  <emdb_id>{1,1}</emdb_id>
-  <relationship>{0,1}</relationship>
-  <details>{0,1}</details>
-</emdb_reference>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="emdb_reference" type="emdb_cross_reference_type" maxOccurs="unbounded"/>

-

-

-

-

Element emdb_cross_reference_type / emdb_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

emdb_id_type

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

EMD-\d{4,}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="emdb_id" type="emdb_id_type"/>

-

-

-

-

Element emdb_cross_reference_type / relationship

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

in_frame | other

-

Children

in_frame, other

-

Instance

-

-

-

- - - - -

-

<relationship>
-  <in_frame>{1,1}</in_frame>
-  <other>{1,1}</other>
-</relationship>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="relationship" minOccurs="0">
-  <xs:complexType>
-    <xs:choice>
-      <xs:element name="in_frame">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="NOOVERLAP"/>
-            <xs:enumeration value="PARTIALOVERLAP"/>
-            <xs:enumeration value="FULLOVERLAP"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="other" type="xs:string"/>
-    </xs:choice>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element emdb_cross_reference_type / relationship / in_frame

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	NOOVERLAP	- -
enumeration	PARTIALOVERLAP	- -
enumeration	FULLOVERLAP	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="in_frame">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="NOOVERLAP"/>
-      <xs:enumeration value="PARTIALOVERLAP"/>
-      <xs:enumeration value="FULLOVERLAP"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element emdb_cross_reference_type / relationship / other

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="other" type="xs:string"/>

-

-

-

-

Element emdb_cross_reference_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element crossreferences_type / pdb_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pdb_cross_reference_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

pdb_reference+

-

Children

pdb_reference

-

Instance

-

-

-

- - - - -

-

<pdb_list>
-  <pdb_reference>{1,unbounded}</pdb_reference>
-</pdb_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="pdb_list" type="pdb_cross_reference_list_type" minOccurs="0"/>

-

-

-

-

Element pdb_cross_reference_list_type / pdb_reference

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pdb_cross_reference_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

pdb_id , relationship{0,1} , details{0,1}

-

Children

details, pdb_id, relationship

-

Instance

-

-

-

- - - - -

-

<pdb_reference>
-  <pdb_id>{1,1}</pdb_id>
-  <relationship>{0,1}</relationship>
-  <details>{0,1}</details>
-</pdb_reference>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="pdb_reference" type="pdb_cross_reference_type" maxOccurs="unbounded"/>

-

-

-

-

Element pdb_cross_reference_type / pdb_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pdb_code_type

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d[\dA-Za-z]{3}|pdb_\d{5}[\dA-Za-z]{3}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="pdb_id" type="pdb_code_type"/>

-

-

-

-

Element pdb_cross_reference_type / relationship

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

in_frame | other

-

Children

in_frame, other

-

Instance

-

-

-

- - - - -

-

<relationship>
-  <in_frame>{1,1}</in_frame>
-  <other>{1,1}</other>
-</relationship>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="relationship" minOccurs="0">
-  <xs:complexType>
-    <xs:choice>
-      <xs:element name="in_frame">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="NOOVERLAP"/>
-            <xs:enumeration value="PARTIALOVERLAP"/>
-            <xs:enumeration value="FULLOVERLAP"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="other" type="xs:string"/>
-    </xs:choice>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element pdb_cross_reference_type / relationship / in_frame

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	NOOVERLAP	- -
enumeration	PARTIALOVERLAP	- -
enumeration	FULLOVERLAP	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="in_frame">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="NOOVERLAP"/>
-      <xs:enumeration value="PARTIALOVERLAP"/>
-      <xs:enumeration value="FULLOVERLAP"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element pdb_cross_reference_type / relationship / other

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="other" type="xs:string"/>

-

-

-

-

Element pdb_cross_reference_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element crossreferences_type / other_db_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

other_db_cross_reference_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

db_reference+

-

Children

db_reference

-

Instance

-

-

-

- - - - -

-

<other_db_list>
-  <db_reference>{1,unbounded}</db_reference>
-</other_db_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="other_db_list" type="other_db_cross_reference_list_type" minOccurs="0"/>

-

-

-

-

Element other_db_cross_reference_list_type / db_reference

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

other_db_cross_reference_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

db_name , accession_id , content_type{0,1} , details{0,1}

-

Children

accession_id, content_type, db_name, details

-

Instance

-

-

-

- - - - -

-

<db_reference>
-  <db_name>{1,1}</db_name>
-  <accession_id>{1,1}</accession_id>
-  <content_type>{0,1}</content_type>
-  <details>{0,1}</details>
-</db_reference>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="db_reference" type="other_db_cross_reference_type" maxOccurs="unbounded"/>

-

-

-

-

Element other_db_cross_reference_type / db_name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="db_name" type="xs:token"/>

-

-

-

-

Element other_db_cross_reference_type / accession_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="accession_id" type="xs:token"/>

-

-

-

-

Element other_db_cross_reference_type / content_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="content_type" type="xs:token" minOccurs="0"/>

-

-

-

-

Element other_db_cross_reference_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element crossreferences_type / auxiliary_link_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

auxiliary_link+

-

Children

auxiliary_link

-

Instance

-

-

-

- - - - -

-

<auxiliary_link_list>
-  <auxiliary_link>{1,unbounded}</auxiliary_link>
-</auxiliary_link_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="auxiliary_link_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence minOccurs="1" maxOccurs="1">
-      <xs:element name="auxiliary_link" type="auxiliary_link_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crossreferences_type / auxiliary_link_list / auxiliary_link

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

auxiliary_link_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

type , link , details{0,1}

-

Children

details, link, type

-

Instance

-

-

-

- - - - -

-

<auxiliary_link>
-  <type>{1,1}</type>
-  <link>{1,1}</link>
-  <details>{0,1}</details>
-</auxiliary_link>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="auxiliary_link" type="auxiliary_link_type" maxOccurs="unbounded"/>

-

-

-

-

Element auxiliary_link_type / type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	2D EM DATA	- -
enumeration	CORRELATIVE LIGHT MICROSCOPY	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="type">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="2D EM DATA"/>
-      <xs:enumeration value="CORRELATIVE LIGHT MICROSCOPY"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element auxiliary_link_type / link

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:anyURI

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

(https?|ftp)://.*

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="link">
-  <xs:simpleType>
-    <xs:restriction base="xs:anyURI">
-      <xs:pattern value="(https?|ftp)://.*"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element auxiliary_link_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element entry_type / sample

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

sample_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

name , supramolecule_list , macromolecule_list{0,1}

-

Children

macromolecule_list, name, supramolecule_list

-

Instance

-

-

-

- - - - -

-

<sample>
-  <name synonym="">{1,1}</name>
-  <supramolecule_list>{1,1}</supramolecule_list>
-  <macromolecule_list>{0,1}</macromolecule_list>
-</sample>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sample" type="sample_type"/>

-

-

-

-

Element sample_type / name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

sci_name_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
synonym	xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="name" type="sci_name_type"/>

-

-

-

-

Element sample_type / supramolecule_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	1

-

-

Model

-

-

supramolecule+

-

Children

supramolecule

-

Instance

-

-

-

- - - - -

-

<supramolecule_list>
-  <supramolecule supramolecule_id="">{1,unbounded}</supramolecule>
-</supramolecule_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="supramolecule_list" maxOccurs="1">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element ref="supramolecule" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element supramolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

base_supramolecule_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
abstract	true

-

-

Substitution Group

-

cell_supramolecule
complex_supramolecule
organelle_or_cellular_component_supramolecule
sample_supramolecule
tissue_supramolecule
virus_supramolecule

-

-

Used by

-

-

-

- - - - - -

Element

sample_type/supramolecule_list

-

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1}

-

Children

category, details, external_references, macromolecule_list, name, number_of_copies, oligomeric_state, parent, recombinant_exp_flag

-

Instance

-

-

-

- - - - -

-

<supramolecule supramolecule_id="">
-  <name synonym="">{1,1}</name>
-  <category type="">{0,1}</category>
-  <parent>{1,1}</parent>
-  <macromolecule_list>{0,1}</macromolecule_list>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <external_references type="">{0,unbounded}</external_references>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-</supramolecule>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="supramolecule" type="base_supramolecule_type" abstract="true"/>

-

-

-

-

Element base_supramolecule_type / name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

sci_name_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
synonym	xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="name" type="sci_name_type"/>

-

-

-

-

Element base_supramolecule_type / category

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of complex_category_type

Type hierarchy

-

xs:token
- complex_category_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="category" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="complex_category_type">
-        <xs:attribute name="type" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="GO"/>
-              <xs:enumeration value="ARBITRARY DEFINITION"/>
-              <xs:enumeration value="PROTEIN ONTOLOGY"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_supramolecule_type / parent

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:nonNegativeInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="parent" type="xs:nonNegativeInteger"/>

-

-

-

-

Element base_supramolecule_type / macromolecule_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

macromolecule+

-

Children

macromolecule

-

Instance

-

-

-

- - - - -

-

<macromolecule_list>
-  <macromolecule>{1,unbounded}</macromolecule>
-</macromolecule_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="macromolecule_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="macromolecule" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="macromolecule_id" type="xs:positiveInteger"/>
-            <xs:element name="number_of_copies" type="xs:positiveInteger" minOccurs="0"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_supramolecule_type / macromolecule_list / macromolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

macromolecule_id , number_of_copies{0,1}

-

Children

macromolecule_id, number_of_copies

-

Instance

-

-

-

- - - - -

-

<macromolecule>
-  <macromolecule_id>{1,1}</macromolecule_id>
-  <number_of_copies>{0,1}</number_of_copies>
-</macromolecule>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="macromolecule" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="macromolecule_id" type="xs:positiveInteger"/>
-      <xs:element name="number_of_copies" type="xs:positiveInteger" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_supramolecule_type / macromolecule_list / macromolecule / macromolecule_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="macromolecule_id" type="xs:positiveInteger"/>

-

-

-

-

Element base_supramolecule_type / macromolecule_list / macromolecule / number_of_copies

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_of_copies" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element base_supramolecule_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_supramolecule_type / number_of_copies

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pos_int_or_string_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_of_copies" type="pos_int_or_string_type" minOccurs="0"/>

-

-

-

-

Element base_supramolecule_type / oligomeric_state

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pos_int_or_string_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="oligomeric_state" type="pos_int_or_string_type" minOccurs="0"/>

-

-

-

-

Element base_supramolecule_type / external_references

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="UNIPROTKB"/>
-              <xs:enumeration value="UNIPARC"/>
-              <xs:enumeration value="INTERPRO"/>
-              <xs:enumeration value="GO"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_supramolecule_type / recombinant_exp_flag

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_exp_flag" type="xs:boolean" minOccurs="0" maxOccurs="1"/>

-

-

-

-

Element sample_type / macromolecule_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

macromolecule_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

macromolecule+

-

Children

macromolecule

-

Instance

-

-

-

- - - - -

-

<macromolecule_list>
-  <macromolecule chimera="" macromolecule_id="" mutant="">{1,unbounded}</macromolecule>
-</macromolecule_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="macromolecule_list" type="macromolecule_list_type" minOccurs="0"/>

-

-

-

-

Element macromolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

base_macromolecule_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
abstract	true

-

-

Substitution Group

-

dna
em_label
ligand
other_macromolecule
protein_or_peptide
rna
saccharide

-

-

Used by

-

-

-

- - - - - -

Complex Type

macromolecule_list_type

-

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1}

-

Children

details, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag

-

Instance

-

-

-

- - - - -

-

<macromolecule chimera="" macromolecule_id="" mutant="">
-  <name synonym="">{1,1}</name>
-  <natural_source database="" synthetically_produced="">{0,1}</natural_source>
-  <molecular_weight>{0,1}</molecular_weight>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-</macromolecule>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="macromolecule" type="base_macromolecule_type" abstract="true"/>

-

-

-

-

Element base_macromolecule_type / name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

sci_name_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
synonym	xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="name" type="sci_name_type"/>

-

-

-

-

Element base_macromolecule_type / natural_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

macromolecule_source_type

Type hierarchy

-

base_source_type
- macromolecule_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<natural_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</natural_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="natural_source" type="macromolecule_source_type" minOccurs="0"/>

-

-

-

-

Element base_source_type / organism

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

organism_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
ncbi	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organism" type="organism_type"/>

-

-

-

-

Element base_source_type / strain

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="strain" type="xs:token" minOccurs="0"/>

-

-

-

-

Element base_source_type / synonym_organism

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synonym_organism" type="xs:token" minOccurs="0"/>

-

-

-

-

Element base_source_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element macromolecule_source_type / organ

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organ" type="xs:token" minOccurs="0"/>

-

-

-

-

Element macromolecule_source_type / tissue

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tissue" type="xs:token" minOccurs="0"/>

-

-

-

-

Element macromolecule_source_type / cell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cell" type="xs:token" minOccurs="0"/>

-

-

-

-

Element macromolecule_source_type / organelle

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organelle" type="xs:token" minOccurs="0"/>

-

-

-

-

Element macromolecule_source_type / cellular_location

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cellular_location" type="xs:token" minOccurs="0"/>

-

-

-

-

Element base_macromolecule_type / molecular_weight

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

molecular_weight_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

experimental{0,1} , theoretical{0,1} , method{0,1}

-

Children

experimental, method, theoretical

-

Instance

-

-

-

- - - - -

-

<molecular_weight>
-  <experimental units="">{0,1}</experimental>
-  <theoretical units="">{0,1}</theoretical>
-  <method>{0,1}</method>
-</molecular_weight>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>

-

-

-

-

Element molecular_weight_type / experimental

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_assembly_weights

Type hierarchy

-

xs:float
- allowed_assembly_weights
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="experimental" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_assembly_weights">
-        <xs:attribute name="units" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="MDa"/>
-              <xs:enumeration value="kDa/nm"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element molecular_weight_type / theoretical

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_assembly_weights

Type hierarchy

-

xs:float
- allowed_assembly_weights
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="theoretical" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_assembly_weights">
-        <xs:attribute name="units" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="MDa"/>
-              <xs:enumeration value="kDa/nm"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element molecular_weight_type / method

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="method" type="xs:token" minOccurs="0"/>

-

-

-

-

Element base_macromolecule_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_macromolecule_type / number_of_copies

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pos_int_or_string_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_of_copies" type="pos_int_or_string_type" minOccurs="0"/>

-

-

-

-

Element base_macromolecule_type / oligomeric_state

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pos_int_or_string_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="oligomeric_state" type="pos_int_or_string_type" minOccurs="0"/>

-

-

-

-

Element base_macromolecule_type / recombinant_exp_flag

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_exp_flag" type="xs:boolean" minOccurs="0" maxOccurs="1"/>

-

-

-

-

Element entry_type / structure_determination_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

structure_determination+

-

Children

structure_determination

-

Instance

-

-

-

- - - - -

-

<structure_determination_list>
-  <structure_determination structure_determination_id="">{1,unbounded}</structure_determination>
-</structure_determination_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="structure_determination_list">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="structure_determination" type="structure_determination_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element entry_type / structure_determination_list / structure_determination

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

structure_determination_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

method , aggregation_state , macromolecules_and_complexes{0,1} , specimen_preparation_list , microscopy_list , image_processing+

-

Children

aggregation_state, image_processing, macromolecules_and_complexes, method, microscopy_list, specimen_preparation_list

-

Instance

-

-

-

- - - - -

-

<structure_determination structure_determination_id="">
-  <method>{1,1}</method>
-  <aggregation_state>{1,1}</aggregation_state>
-  <macromolecules_and_complexes>{0,1}</macromolecules_and_complexes>
-  <specimen_preparation_list>{1,1}</specimen_preparation_list>
-  <microscopy_list>{1,1}</microscopy_list>
-  <image_processing image_processing_id="">{1,unbounded}</image_processing>
-</structure_determination>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
structure_determination_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="structure_determination" type="structure_determination_type" maxOccurs="unbounded"/>

-

-

-

-

Element structure_determination_type / method

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	singleParticle	- -
enumeration	subtomogramAveraging	- -
enumeration	tomography	- -
enumeration	electronCrystallography	- -
enumeration	helical	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="method">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="singleParticle"/>
-      <xs:enumeration value="subtomogramAveraging"/>
-      <xs:enumeration value="tomography"/>
-      <xs:enumeration value="electronCrystallography"/>
-      <xs:enumeration value="helical"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element structure_determination_type / aggregation_state

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	particle	- -
enumeration	filament	- -
enumeration	twoDArray	- -
enumeration	threeDArray	- -
enumeration	helicalArray	- -
enumeration	cell	- -
enumeration	tissue	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="aggregation_state">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="particle"/>
-      <xs:enumeration value="filament"/>
-      <xs:enumeration value="twoDArray"/>
-      <xs:enumeration value="threeDArray"/>
-      <xs:enumeration value="helicalArray"/>
-      <xs:enumeration value="cell"/>
-      <xs:enumeration value="tissue"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element structure_determination_type / macromolecules_and_complexes

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

macromolecules_and_complexes_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

macromolecule_id | complex_id

-

Children

complex_id, macromolecule_id

-

Instance

-

-

-

- - - - -

-

<macromolecules_and_complexes>
-  <macromolecule_id>{1,1}</macromolecule_id>
-  <complex_id>{1,1}</complex_id>
-</macromolecules_and_complexes>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="macromolecules_and_complexes" type="macromolecules_and_complexes_type" minOccurs="0"/>

-

-

-

-

Element macromolecules_and_complexes_type / macromolecule_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="macromolecule_id" type="xs:positiveInteger"/>

-

-

-

-

Element macromolecules_and_complexes_type / complex_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:nonNegativeInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="complex_id" type="xs:nonNegativeInteger"/>

-

-

-

-

Element structure_determination_type / specimen_preparation_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

specimen_preparation+

-

Children

specimen_preparation

-

Instance

-

-

-

- - - - -

-

<specimen_preparation_list>
-  <specimen_preparation preparation_id="">{1,unbounded}</specimen_preparation>
-</specimen_preparation_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="specimen_preparation_list">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element ref="specimen_preparation" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element specimen_preparation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

base_preparation_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
abstract	true

-

-

Substitution Group

-

-

-

Used by

-

-

-

- - - - - -

Element

structure_determination_type/specimen_preparation_list

-

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1}

-

Children

buffer, concentration, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Instance

-

-

-

- - - - -

-

<specimen_preparation preparation_id="">
-  <concentration units="">{0,1}</concentration>
-  <buffer>{0,1}</buffer>
-  <staining>{0,1}</staining>
-  <sugar_embedding>{0,1}</sugar_embedding>
-  <shadowing>{0,1}</shadowing>
-  <grid>{0,1}</grid>
-  <vitrification>{0,1}</vitrification>
-  <details>{0,1}</details>
-</specimen_preparation>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="specimen_preparation" type="base_preparation_type" abstract="true"/>

-

-

-

-

Element base_preparation_type / concentration

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_concentration

Type hierarchy

-

xs:float
- allowed_concentration
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	restriction of xs:string	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="concentration" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_concentration">
-        <xs:attribute name="units" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:string">
-              <xs:enumeration value="mg/mL"/>
-              <xs:enumeration value="mM"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_preparation_type / buffer

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

buffer_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

ph , component* , details{0,1}

-

Children

component, details, ph

-

Instance

-

-

-

- - - - -

-

<buffer>
-  <ph>{1,1}</ph>
-  <component>{0,unbounded}</component>
-  <details>{0,1}</details>
-</buffer>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="buffer" type="buffer_type" minOccurs="0"/>

-

-

-

-

Element buffer_type / ph

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	14	- -
minInclusive	0	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ph">
-  <xs:simpleType>
-    <xs:restriction base="xs:float">
-      <xs:minInclusive value="0"/>
-      <xs:maxInclusive value="14"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element buffer_type / component

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

buffer_component_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

concentration{0,1} , formula{0,1} , name{0,1}

-

Children

concentration, formula, name

-

Instance

-

-

-

- - - - -

-

<component>
-  <concentration units="">{0,1}</concentration>
-  <formula>{0,1}</formula>
-  <name>{0,1}</name>
-</component>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="component" type="buffer_component_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element buffer_component_type / concentration

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_concentration

Type hierarchy

-

xs:float
- allowed_concentration
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="concentration" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_concentration">
-        <xs:attribute name="units" type="xs:token" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element buffer_component_type / formula

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

formula_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="formula" type="formula_type" minOccurs="0"/>

-

-

-

-

Element buffer_component_type / name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="name" type="xs:token" minOccurs="0"/>

-

-

-

-

Element buffer_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_preparation_type / staining

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

type , material , details{0,1}

-

Children

details, material, type

-

Instance

-

-

-

- - - - -

-

<staining>
-  <type>{1,1}</type>
-  <material>{1,1}</material>
-  <details>{0,1}</details>
-</staining>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="staining" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="type">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="NEGATIVE"/>
-            <xs:enumeration value="NONE"/>
-            <xs:enumeration value="POSITIVE"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="material" type="xs:token"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_preparation_type / staining / type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	NEGATIVE	- -
enumeration	NONE	- -
enumeration	POSITIVE	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="type">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="NEGATIVE"/>
-      <xs:enumeration value="NONE"/>
-      <xs:enumeration value="POSITIVE"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_preparation_type / staining / material

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="material" type="xs:token"/>

-

-

-

-

Element base_preparation_type / staining / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_preparation_type / sugar_embedding

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

material , details{0,1}

-

Children

details, material

-

Instance

-

-

-

- - - - -

-

<sugar_embedding>
-  <material>{1,1}</material>
-  <details>{0,1}</details>
-</sugar_embedding>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sugar_embedding" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="material" type="xs:token"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_preparation_type / sugar_embedding / material

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="material" type="xs:token"/>

-

-

-

-

Element base_preparation_type / sugar_embedding / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_preparation_type / shadowing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

material , angle , thickness , details{0,1}

-

Children

angle, details, material, thickness

-

Instance

-

-

-

- - - - -

-

<shadowing>
-  <material>{1,1}</material>
-  <angle units="deg">{1,1}</angle>
-  <thickness units="nm">{1,1}</thickness>
-  <details>{0,1}</details>
-</shadowing>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="shadowing" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="material" type="xs:token"/>
-      <xs:element name="angle">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_angle_shadowing">
-              <xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="thickness">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_thickness_shadowing">
-              <xs:attribute name="units" type="xs:token" fixed="nm" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_preparation_type / shadowing / material

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="material" type="xs:token"/>

-

-

-

-

Element base_preparation_type / shadowing / angle

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_angle_shadowing

Type hierarchy

-

xs:float
- allowed_angle_shadowing
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="angle">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_angle_shadowing">
-        <xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_preparation_type / shadowing / thickness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_thickness_shadowing

Type hierarchy

-

xs:float
- allowed_thickness_shadowing
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	nm	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="thickness">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_thickness_shadowing">
-        <xs:attribute name="units" type="xs:token" fixed="nm" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_preparation_type / shadowing / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_preparation_type / grid

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

grid_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

model{0,1} , material{0,1} , mesh{0,1} , support_film* , pretreatment{0,1} , details{0,1}

-

Children

details, material, mesh, model, pretreatment, support_film

-

Instance

-

-

-

- - - - -

-

<grid>
-  <model>{0,1}</model>
-  <material>{0,1}</material>
-  <mesh>{0,1}</mesh>
-  <support_film film_type_id="">{0,unbounded}</support_film>
-  <pretreatment>{0,1}</pretreatment>
-  <details>{0,1}</details>
-</grid>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="grid" type="grid_type" minOccurs="0"/>

-

-

-

-

Element grid_type / model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="model" type="xs:token" minOccurs="0"/>

-

-

-

-

Element grid_type / material

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	COPPER	- -
enumeration	COPPER/PALLADIUM	- -
enumeration	COPPER/RHODIUM	- -
enumeration	GOLD	- -
enumeration	GRAPHENE OXIDE	- -
enumeration	MOLYBDENUM	- -
enumeration	NICKEL	- -
enumeration	NICKEL/TITANIUM	- -
enumeration	PLATINUM	- -
enumeration	SILICON NITRIDE	- -
enumeration	TITANIUM	- -
enumeration	TUNGSTEN	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="material" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="COPPER"/>
-      <xs:enumeration value="COPPER/PALLADIUM"/>
-      <xs:enumeration value="COPPER/RHODIUM"/>
-      <xs:enumeration value="GOLD"/>
-      <xs:enumeration value="GRAPHENE OXIDE"/>
-      <xs:enumeration value="MOLYBDENUM"/>
-      <xs:enumeration value="NICKEL"/>
-      <xs:enumeration value="NICKEL/TITANIUM"/>
-      <xs:enumeration value="PLATINUM"/>
-      <xs:enumeration value="SILICON NITRIDE"/>
-      <xs:enumeration value="TITANIUM"/>
-      <xs:enumeration value="TUNGSTEN"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element grid_type / mesh

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="mesh" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element grid_type / support_film

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

film_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

film_material{0,1} , film_topology{0,1} , film_thickness{0,1}

-

Children

film_material, film_thickness, film_topology

-

Instance

-

-

-

- - - - -

-

<support_film film_type_id="">
-  <film_material>{0,1}</film_material>
-  <film_topology>{0,1}</film_topology>
-  <film_thickness units="nm">{0,1}</film_thickness>
-</support_film>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
film_type_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="support_film" type="film_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element film_type / film_material

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	CARBON	- -
enumeration	CELLULOSE ACETATE	- -
enumeration	FORMVAR	- -
enumeration	GOLD	- -
enumeration	GRAPHENE	- -
enumeration	GRAPHENE OXIDE	- -
enumeration	PARLODION	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="film_material" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="CARBON"/>
-      <xs:enumeration value="CELLULOSE ACETATE"/>
-      <xs:enumeration value="FORMVAR"/>
-      <xs:enumeration value="GOLD"/>
-      <xs:enumeration value="GRAPHENE"/>
-      <xs:enumeration value="GRAPHENE OXIDE"/>
-      <xs:enumeration value="PARLODION"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element film_type / film_topology

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	CONTINUOUS	- -
enumeration	HOLEY	- -
enumeration	HOLEY ARRAY	- -
enumeration	LACEY	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="film_topology" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="CONTINUOUS"/>
-      <xs:enumeration value="HOLEY"/>
-      <xs:enumeration value="HOLEY ARRAY"/>
-      <xs:enumeration value="LACEY"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element film_type / film_thickness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_film_thickness

Type hierarchy

-

xs:float
- allowed_film_thickness
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	nm	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="film_thickness" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_film_thickness">
-        <xs:attribute name="units" type="xs:token" fixed="nm"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element grid_type / pretreatment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

grid_pretreatment_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

type{0,1} , time{0,1} , atmosphere{0,1} , pressure{0,1}

-

Children

atmosphere, pressure, time, type

-

Instance

-

-

-

- - - - -

-

<pretreatment>
-  <type>{0,1}</type>
-  <time units="s">{0,1}</time>
-  <atmosphere>{0,1}</atmosphere>
-  <pressure units="kPa">{0,1}</pressure>
-</pretreatment>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="pretreatment" type="grid_pretreatment_type" minOccurs="0"/>

-

-

-

-

Element grid_pretreatment_type / type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="type" type="xs:token" minOccurs="0"/>

-

-

-

-

Element grid_pretreatment_type / time

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_time_glow_discharge

Type hierarchy

-

xs:positiveInteger
- allowed_time_glow_discharge
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	s	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="time" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_time_glow_discharge">
-        <xs:attribute name="units" type="xs:token" fixed="s" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element grid_pretreatment_type / atmosphere

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	AIR	- -
enumeration	AMYLAMINE	- -
enumeration	NITROGEN	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="atmosphere" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="AIR"/>
-      <xs:enumeration value="AMYLAMINE"/>
-      <xs:enumeration value="NITROGEN"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element grid_pretreatment_type / pressure

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_pressure_glow_discharge

Type hierarchy

-

xs:float
- allowed_pressure_glow_discharge
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	kPa	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="pressure" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_pressure_glow_discharge">
-        <xs:attribute name="units" type="xs:token" fixed="kPa" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element grid_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_preparation_type / vitrification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

vitrification_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

cryogen_name , chamber_humidity{0,1} , chamber_temperature{0,1} , instrument{0,1} , details{0,1} , timed_resolved_state{0,1} , method{0,1}

-

Children

chamber_humidity, chamber_temperature, cryogen_name, details, instrument, method, timed_resolved_state

-

Instance

-

-

-

- - - - -

-

<vitrification>
-  <cryogen_name>{1,1}</cryogen_name>
-  <chamber_humidity units="percentage">{0,1}</chamber_humidity>
-  <chamber_temperature units="K">{0,1}</chamber_temperature>
-  <instrument>{0,1}</instrument>
-  <details>{0,1}</details>
-  <timed_resolved_state>{0,1}</timed_resolved_state>
-  <method>{0,1}</method>
-</vitrification>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="vitrification" type="vitrification_type" minOccurs="0"/>

-

-

-

-

Element vitrification_type / cryogen_name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	ETHANE	- -
enumeration	ETHANE-PROPANE	- -
enumeration	FREON 12	- -
enumeration	FREON 22	- -
enumeration	HELIUM	- -
enumeration	METHANE	- -
enumeration	NITROGEN	- -
enumeration	OTHER	- -
enumeration	PROPANE	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cryogen_name">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="ETHANE"/>
-      <xs:enumeration value="ETHANE-PROPANE"/>
-      <xs:enumeration value="FREON 12"/>
-      <xs:enumeration value="FREON 22"/>
-      <xs:enumeration value="HELIUM"/>
-      <xs:enumeration value="METHANE"/>
-      <xs:enumeration value="NITROGEN"/>
-      <xs:enumeration value="OTHER"/>
-      <xs:enumeration value="PROPANE"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element vitrification_type / chamber_humidity

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_humidity_vitrification

Type hierarchy

-

xs:float
- allowed_humidity_vitrification
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	percentage	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="chamber_humidity" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_humidity_vitrification">
-        <xs:attribute name="units" type="xs:token" fixed="percentage" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element vitrification_type / chamber_temperature

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_temperature_vitrification

Type hierarchy

-

xs:float
- allowed_temperature_vitrification
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	K	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="chamber_temperature" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_temperature_vitrification">
-        <xs:attribute name="units" type="xs:token" fixed="K" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element vitrification_type / instrument

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	EMS-002 RAPID IMMERSION FREEZER	- -
enumeration	FEI VITROBOT MARK I	- -
enumeration	FEI VITROBOT MARK II	- -
enumeration	FEI VITROBOT MARK III	- -
enumeration	FEI VITROBOT MARK IV	- -
enumeration	GATAN CRYOPLUNGE 3	- -
enumeration	HOMEMADE PLUNGER	- -
enumeration	LEICA EM CPC	- -
enumeration	LEICA EM GP	- -
enumeration	LEICA KF80	- -
enumeration	LEICA PLUNGER	- -
enumeration	REICHERT-JUNG PLUNGER	- -
enumeration	SPOTITON	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="instrument" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="EMS-002 RAPID IMMERSION FREEZER"/>
-      <xs:enumeration value="FEI VITROBOT MARK I"/>
-      <xs:enumeration value="FEI VITROBOT MARK II"/>
-      <xs:enumeration value="FEI VITROBOT MARK III"/>
-      <xs:enumeration value="FEI VITROBOT MARK IV"/>
-      <xs:enumeration value="GATAN CRYOPLUNGE 3"/>
-      <xs:enumeration value="HOMEMADE PLUNGER"/>
-      <xs:enumeration value="LEICA EM CPC"/>
-      <xs:enumeration value="LEICA EM GP"/>
-      <xs:enumeration value="LEICA KF80"/>
-      <xs:enumeration value="LEICA PLUNGER"/>
-      <xs:enumeration value="REICHERT-JUNG PLUNGER"/>
-      <xs:enumeration value="SPOTITON"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element vitrification_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element vitrification_type / timed_resolved_state

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="timed_resolved_state" type="xs:token" minOccurs="0"/>

-

-

-

-

Element vitrification_type / method

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="method" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_preparation_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element structure_determination_type / microscopy_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

microscopy+

-

Children

microscopy

-

Instance

-

-

-

- - - - -

-

<microscopy_list>
-  <microscopy microscopy_id="">{1,unbounded}</microscopy>
-</microscopy_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="microscopy_list">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element ref="microscopy" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element microscopy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

base_microscopy_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
abstract	true

-

-

Substitution Group

-

-

-

Used by

-

-

-

- - - - - -

Element

structure_determination_type/microscopy_list

-

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1}

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min

-

Instance

-

-

-

- - - - -

-

<microscopy microscopy_id="">
-  <specimen_preparations>{0,1}</specimen_preparations>
-  <microscope>{1,1}</microscope>
-  <illumination_mode>{1,1}</illumination_mode>
-  <imaging_mode>{1,1}</imaging_mode>
-  <electron_source>{1,1}</electron_source>
-  <acceleration_voltage units="kV">{1,1}</acceleration_voltage>
-  <c2_aperture_diameter units="µm">{0,1}</c2_aperture_diameter>
-  <nominal_cs units="mm">{0,1}</nominal_cs>
-  <nominal_defocus_min units="µm">{0,1}</nominal_defocus_min>
-  <calibrated_defocus_min units="µm">{0,1}</calibrated_defocus_min>
-  <nominal_defocus_max units="µm">{0,1}</nominal_defocus_max>
-  <calibrated_defocus_max units="µm">{0,1}</calibrated_defocus_max>
-  <nominal_magnification>{0,1}</nominal_magnification>
-  <calibrated_magnification>{0,1}</calibrated_magnification>
-  <specimen_holder_model>{0,1}</specimen_holder_model>
-  <cooling_holder_cryogen>{0,1}</cooling_holder_cryogen>
-  <temperature>{0,1}</temperature>
-  <alignment_procedure>{0,1}</alignment_procedure>
-  <specialist_optics>{0,1}</specialist_optics>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <date>{0,1}</date>
-  <image_recording_list>{1,1}</image_recording_list>
-  <specimen_holder>{0,1}</specimen_holder>
-  <tilt_angle_min>{0,1}</tilt_angle_min>
-  <tilt_angle_max>{0,1}</tilt_angle_max>
-</microscopy>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="microscopy" type="base_microscopy_type" abstract="true"/>

-

-

-

-

Element base_microscopy_type / specimen_preparations

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

specimen_preparation_id

-

Children

specimen_preparation_id

-

Instance

-

-

-

- - - - -

-

<specimen_preparations>
-  <specimen_preparation_id>{1,1}</specimen_preparation_id>
-</specimen_preparations>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="specimen_preparations" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence maxOccurs="unbounded">
-      <xs:element name="specimen_preparation_id" type="xs:positiveInteger"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / specimen_preparations / specimen_preparation_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="specimen_preparation_id" type="xs:positiveInteger"/>

-

-

-

-

Element base_microscopy_type / microscope

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	FEI MORGAGNI	- -
enumeration	FEI POLARA 300	- -
enumeration	FEI TALOS ARCTICA	- -
enumeration	FEI TECNAI 10	- -
enumeration	FEI TECNAI 12	- -
enumeration	FEI TECNAI 20	- -
enumeration	FEI TECNAI ARCTICA	- -
enumeration	FEI TECNAI F20	- -
enumeration	FEI TECNAI F30	- -
enumeration	FEI TECNAI SPHERA	- -
enumeration	FEI TECNAI SPIRIT	- -
enumeration	FEI TITAN	- -
enumeration	FEI TITAN KRIOS	- -
enumeration	FEI/PHILIPS CM10	- -
enumeration	FEI/PHILIPS CM12	- -
enumeration	FEI/PHILIPS CM120T	- -
enumeration	FEI/PHILIPS CM200FEG	- -
enumeration	FEI/PHILIPS CM200FEG/SOPHIE	- -
enumeration	FEI/PHILIPS CM200FEG/ST	- -
enumeration	FEI/PHILIPS CM200FEG/UT	- -
enumeration	FEI/PHILIPS CM200T	- -
enumeration	FEI/PHILIPS CM300FEG/HE	- -
enumeration	FEI/PHILIPS CM300FEG/ST	- -
enumeration	FEI/PHILIPS CM300FEG/T	- -
enumeration	FEI/PHILIPS EM400	- -
enumeration	FEI/PHILIPS EM420	- -
enumeration	HITACHI EF2000	- -
enumeration	HITACHI H-9500SD	- -
enumeration	HITACHI H3000 UHVEM	- -
enumeration	HITACHI H7600	- -
enumeration	HITACHI HF2000	- -
enumeration	HITACHI HF3000	- -
enumeration	JEOL 100CX	- -
enumeration	JEOL 1000EES	- -
enumeration	JEOL 1010	- -
enumeration	JEOL 1200	- -
enumeration	JEOL 1200EX	- -
enumeration	JEOL 1200EXII	- -
enumeration	JEOL 1230	- -
enumeration	JEOL 1400	- -
enumeration	JEOL 1400/HR + YPS FEG	- -
enumeration	JEOL 2000EX	- -
enumeration	JEOL 2000EXII	- -
enumeration	JEOL 2010	- -
enumeration	JEOL 2010F	- -
enumeration	JEOL 2010HC	- -
enumeration	JEOL 2010HT	- -
enumeration	JEOL 2010UHR	- -
enumeration	JEOL 2011	- -
enumeration	JEOL 2100	- -
enumeration	JEOL 2100F	- -
enumeration	JEOL 2200FS	- -
enumeration	JEOL 2200FSC	- -
enumeration	JEOL 3000SFF	- -
enumeration	JEOL 3100FEF	- -
enumeration	JEOL 3100FFC	- -
enumeration	JEOL 3200FS	- -
enumeration	JEOL 3200FSC	- -
enumeration	JEOL 4000	- -
enumeration	JEOL 4000EX	- -
enumeration	JEOL CRYO ARM 200	- -
enumeration	JEOL CRYO ARM 300	- -
enumeration	JEOL KYOTO-3000SFF	- -
enumeration	TFS GLACIOS	- -
enumeration	TFS KRIOS	- -
enumeration	TFS TALOS	- -
enumeration	TFS TALOS L120C	- -
enumeration	TFS TALOS F200C	- -
enumeration	TFS TITAN THEMIS	- -
enumeration	TFS TUNDRA	- -
enumeration	ZEISS LEO912	- -
enumeration	ZEISS LIBRA120PLUS	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="microscope">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="FEI MORGAGNI"/>
-      <xs:enumeration value="FEI POLARA 300"/>
-      <xs:enumeration value="FEI TALOS ARCTICA"/>
-      <xs:enumeration value="FEI TECNAI 10"/>
-      <xs:enumeration value="FEI TECNAI 12"/>
-      <xs:enumeration value="FEI TECNAI 20"/>
-      <xs:enumeration value="FEI TECNAI ARCTICA"/>
-      <xs:enumeration value="FEI TECNAI F20"/>
-      <xs:enumeration value="FEI TECNAI F30"/>
-      <xs:enumeration value="FEI TECNAI SPHERA"/>
-      <xs:enumeration value="FEI TECNAI SPIRIT"/>
-      <xs:enumeration value="FEI TITAN"/>
-      <xs:enumeration value="FEI TITAN KRIOS"/>
-      <xs:enumeration value="FEI/PHILIPS CM10"/>
-      <xs:enumeration value="FEI/PHILIPS CM12"/>
-      <xs:enumeration value="FEI/PHILIPS CM120T"/>
-      <xs:enumeration value="FEI/PHILIPS CM200FEG"/>
-      <xs:enumeration value="FEI/PHILIPS CM200FEG/SOPHIE"/>
-      <xs:enumeration value="FEI/PHILIPS CM200FEG/ST"/>
-      <xs:enumeration value="FEI/PHILIPS CM200FEG/UT"/>
-      <xs:enumeration value="FEI/PHILIPS CM200T"/>
-      <xs:enumeration value="FEI/PHILIPS CM300FEG/HE"/>
-      <xs:enumeration value="FEI/PHILIPS CM300FEG/ST"/>
-      <xs:enumeration value="FEI/PHILIPS CM300FEG/T"/>
-      <xs:enumeration value="FEI/PHILIPS EM400"/>
-      <xs:enumeration value="FEI/PHILIPS EM420"/>
-      <xs:enumeration value="HITACHI EF2000"/>
-      <xs:enumeration value="HITACHI H-9500SD"/>
-      <xs:enumeration value="HITACHI H3000 UHVEM"/>
-      <xs:enumeration value="HITACHI H7600"/>
-      <xs:enumeration value="HITACHI HF2000"/>
-      <xs:enumeration value="HITACHI HF3000"/>
-      <xs:enumeration value="JEOL 100CX"/>
-      <xs:enumeration value="JEOL 1000EES"/>
-      <xs:enumeration value="JEOL 1010"/>
-      <xs:enumeration value="JEOL 1200"/>
-      <xs:enumeration value="JEOL 1200EX"/>
-      <xs:enumeration value="JEOL 1200EXII"/>
-      <xs:enumeration value="JEOL 1230"/>
-      <xs:enumeration value="JEOL 1400"/>
-      <xs:enumeration value="JEOL 1400/HR + YPS FEG"/>
-      <xs:enumeration value="JEOL 2000EX"/>
-      <xs:enumeration value="JEOL 2000EXII"/>
-      <xs:enumeration value="JEOL 2010"/>
-      <xs:enumeration value="JEOL 2010F"/>
-      <xs:enumeration value="JEOL 2010HC"/>
-      <xs:enumeration value="JEOL 2010HT"/>
-      <xs:enumeration value="JEOL 2010UHR"/>
-      <xs:enumeration value="JEOL 2011"/>
-      <xs:enumeration value="JEOL 2100"/>
-      <xs:enumeration value="JEOL 2100F"/>
-      <xs:enumeration value="JEOL 2200FS"/>
-      <xs:enumeration value="JEOL 2200FSC"/>
-      <xs:enumeration value="JEOL 3000SFF"/>
-      <xs:enumeration value="JEOL 3100FEF"/>
-      <xs:enumeration value="JEOL 3100FFC"/>
-      <xs:enumeration value="JEOL 3200FS"/>
-      <xs:enumeration value="JEOL 3200FSC"/>
-      <xs:enumeration value="JEOL 4000"/>
-      <xs:enumeration value="JEOL 4000EX"/>
-      <xs:enumeration value="JEOL CRYO ARM 200"/>
-      <xs:enumeration value="JEOL CRYO ARM 300"/>
-      <xs:enumeration value="JEOL KYOTO-3000SFF"/>
-      <xs:enumeration value="TFS GLACIOS"/>
-      <xs:enumeration value="TFS KRIOS"/>
-      <xs:enumeration value="TFS TALOS"/>
-      <xs:enumeration value="TFS TALOS L120C"/>
-      <xs:enumeration value="TFS TALOS F200C"/>
-      <xs:enumeration value="TFS TITAN THEMIS"/>
-      <xs:enumeration value="TFS TUNDRA"/>
-      <xs:enumeration value="ZEISS LEO912"/>
-      <xs:enumeration value="ZEISS LIBRA120PLUS"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / illumination_mode

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	FLOOD BEAM	- -
enumeration	SPOT SCAN	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="illumination_mode">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="FLOOD BEAM"/>
-      <xs:enumeration value="SPOT SCAN"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / imaging_mode

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	4D-STEM	- -
enumeration	BRIGHT FIELD	- -
enumeration	DARK FIELD	- -
enumeration	DIFFRACTION	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="imaging_mode">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="4D-STEM"/>
-      <xs:enumeration value="BRIGHT FIELD"/>
-      <xs:enumeration value="DARK FIELD"/>
-      <xs:enumeration value="DIFFRACTION"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / electron_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	TUNGSTEN HAIRPIN	- -
enumeration	LAB6	- -
enumeration	OTHER	- -
enumeration	FIELD EMISSION GUN	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="electron_source">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="TUNGSTEN HAIRPIN"/>
-      <xs:enumeration value="LAB6"/>
-      <xs:enumeration value="OTHER"/>
-      <xs:enumeration value="FIELD EMISSION GUN"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / acceleration_voltage

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_acceleration_voltage

Type hierarchy

-

xs:positiveInteger
- allowed_acceleration_voltage
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	kV	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="acceleration_voltage">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_acceleration_voltage">
-        <xs:attribute name="units" type="xs:token" fixed="kV" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / c2_aperture_diameter

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_c2_aperture_diameter

Type hierarchy

-

xs:float
- allowed_c2_aperture_diameter
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	µm	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="c2_aperture_diameter" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_c2_aperture_diameter">
-        <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / nominal_cs

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_nominal_cs

Type hierarchy

-

xs:float
- allowed_nominal_cs
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	mm	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="nominal_cs" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_nominal_cs">
-        <xs:attribute name="units" type="xs:token" fixed="mm" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / nominal_defocus_min

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_defocus_min

Type hierarchy

-

xs:float
- allowed_defocus_min
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	µm	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="nominal_defocus_min" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_defocus_min">
-        <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / calibrated_defocus_min

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_defocus_min

Type hierarchy

-

xs:float
- allowed_defocus_min
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	µm	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="calibrated_defocus_min" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_defocus_min">
-        <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / nominal_defocus_max

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_defocus_max

Type hierarchy

-

xs:float
- allowed_defocus_max
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	µm	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="nominal_defocus_max" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_defocus_max">
-        <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / calibrated_defocus_max

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_defocus_max

Type hierarchy

-

xs:float
- allowed_defocus_max
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	µm	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="calibrated_defocus_max" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_defocus_max">
-        <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / nominal_magnification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

allowed_magnification

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	500000	- -
minInclusive	1000	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="nominal_magnification" type="allowed_magnification" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / calibrated_magnification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

allowed_magnification

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	500000	- -
minInclusive	1000	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="calibrated_magnification" type="allowed_magnification" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / specimen_holder_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	FISCHIONE 2550	- -
enumeration	FISCHIONE INSTRUMENTS DUAL AXIS TOMOGRAPHY HOLDER	- -
enumeration	FEI TITAN KRIOS AUTOGRID HOLDER	- -
enumeration	GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER	- -
enumeration	GATAN 910 MULTI-SPECIMEN SINGLE TILT CRYO TRANSFER HOLDER	- -
enumeration	GATAN 914 HIGH TILT LIQUID NITROGEN CRYO TRANSFER TOMOGRAPHY HOLDER	- -
enumeration	GATAN 915 DOUBLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER	- -
enumeration	GATAN CHDT 3504 DOUBLE TILT HIGH RESOLUTION NITROGEN COOLING HOLDER	- -
enumeration	GATAN CT3500 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER	- -
enumeration	GATAN CT3500TR SINGLE TILT ROTATION LIQUID NITROGEN CRYO TRANSFER HOLDER	- -
enumeration	GATAN ELSA 698 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER	- -
enumeration	GATAN HC 3500 SINGLE TILT HEATING/NITROGEN COOLING HOLDER	- -
enumeration	GATAN HCHDT 3010 DOUBLE TILT HIGH RESOLUTION HELIUM COOLING HOLDER	- -
enumeration	GATAN HCHST 3008 SINGLE TILT HIGH RESOLUTION HELIUM COOLING HOLDER	- -
enumeration	GATAN HELIUM	- -
enumeration	GATAN LIQUID NITROGEN	- -
enumeration	GATAN UHRST 3500 SINGLE TILT ULTRA HIGH RESOLUTION NITROGEN COOLING HOLDER	- -
enumeration	GATAN ULTDT ULTRA LOW TEMPERATURE DOUBLE TILT HELIUM COOLING HOLDER	- -
enumeration	GATAN ULTST ULTRA LOW TEMPERATURE SINGLE TILT HELIUM COOLING HOLDER	- -
enumeration	HOME BUILD	- -
enumeration	JEOL	- -
enumeration	JEOL 3200FSC CRYOHOLDER	- -
enumeration	OTHER	- -
enumeration	PHILIPS ROTATION HOLDER	- -
enumeration	SIDE ENTRY, EUCENTRIC	- -
enumeration	JEOL CRYOSPECPORTER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="specimen_holder_model" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="FISCHIONE 2550"/>
-      <xs:enumeration value="FISCHIONE INSTRUMENTS DUAL AXIS TOMOGRAPHY HOLDER"/>
-      <xs:enumeration value="FEI TITAN KRIOS AUTOGRID HOLDER"/>
-      <xs:enumeration value="GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-      <xs:enumeration value="GATAN 910 MULTI-SPECIMEN SINGLE TILT CRYO TRANSFER HOLDER"/>
-      <xs:enumeration value="GATAN 914 HIGH TILT LIQUID NITROGEN CRYO TRANSFER TOMOGRAPHY HOLDER"/>
-      <xs:enumeration value="GATAN 915 DOUBLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-      <xs:enumeration value="GATAN CHDT 3504 DOUBLE TILT HIGH RESOLUTION NITROGEN COOLING HOLDER"/>
-      <xs:enumeration value="GATAN CT3500 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-      <xs:enumeration value="GATAN CT3500TR SINGLE TILT ROTATION LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-      <xs:enumeration value="GATAN ELSA 698 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-      <xs:enumeration value="GATAN HC 3500 SINGLE TILT HEATING/NITROGEN COOLING HOLDER"/>
-      <xs:enumeration value="GATAN HCHDT 3010 DOUBLE TILT HIGH RESOLUTION HELIUM COOLING HOLDER"/>
-      <xs:enumeration value="GATAN HCHST 3008 SINGLE TILT HIGH RESOLUTION HELIUM COOLING HOLDER"/>
-      <xs:enumeration value="GATAN HELIUM"/>
-      <xs:enumeration value="GATAN LIQUID NITROGEN"/>
-      <xs:enumeration value="GATAN UHRST 3500 SINGLE TILT ULTRA HIGH RESOLUTION NITROGEN COOLING HOLDER"/>
-      <xs:enumeration value="GATAN ULTDT ULTRA LOW TEMPERATURE DOUBLE TILT HELIUM COOLING HOLDER"/>
-      <xs:enumeration value="GATAN ULTST ULTRA LOW TEMPERATURE SINGLE TILT HELIUM COOLING HOLDER"/>
-      <xs:enumeration value="HOME BUILD"/>
-      <xs:enumeration value="JEOL"/>
-      <xs:enumeration value="JEOL 3200FSC CRYOHOLDER"/>
-      <xs:enumeration value="OTHER"/>
-      <xs:enumeration value="PHILIPS ROTATION HOLDER"/>
-      <xs:enumeration value="SIDE ENTRY, EUCENTRIC"/>
-      <xs:enumeration value="JEOL CRYOSPECPORTER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / cooling_holder_cryogen

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	HELIUM	- -
enumeration	NITROGEN	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cooling_holder_cryogen" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="HELIUM"/>
-      <xs:enumeration value="NITROGEN"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / temperature

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

temperature_min{0,1} , temperature_max{0,1} , temperature_average{0,1}

-

Children

temperature_average, temperature_max, temperature_min

-

Instance

-

-

-

- - - - -

-

<temperature>
-  <temperature_min units="K">{0,1}</temperature_min>
-  <temperature_max units="K">{0,1}</temperature_max>
-  <temperature_average units="K">{0,1}</temperature_average>
-</temperature>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="temperature" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="temperature_min" type="temperature_type" minOccurs="0"/>
-      <xs:element name="temperature_max" type="temperature_type" minOccurs="0"/>
-      <xs:element name="temperature_average" type="temperature_type" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / temperature / temperature_min

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

temperature_type

Type hierarchy

-

xs:float
- allowed_temperature
  - temperature_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	K	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="temperature_min" type="temperature_type" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / temperature / temperature_max

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

temperature_type

Type hierarchy

-

xs:float
- allowed_temperature
  - temperature_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	K	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="temperature_max" type="temperature_type" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / temperature / temperature_average

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

temperature_type

Type hierarchy

-

xs:float
- allowed_temperature
  - temperature_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	K	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="temperature_average" type="temperature_type" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / alignment_procedure

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

none | basic | zemlin_tableau | coma_free | other | legacy

-

Children

basic, coma_free, legacy, none, other, zemlin_tableau

-

Instance

-

-

-

- - - - -

-

<alignment_procedure>
-  <none>{1,1}</none>
-  <basic>{1,1}</basic>
-  <zemlin_tableau>{1,1}</zemlin_tableau>
-  <coma_free>{1,1}</coma_free>
-  <other>{1,1}</other>
-  <legacy>{1,1}</legacy>
-</alignment_procedure>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="alignment_procedure" minOccurs="0">
-  <xs:complexType>
-    <xs:choice>
-      <xs:element name="none">
-        <xs:complexType/>
-      </xs:element>
-      <xs:element name="basic">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="residual_tilt" type="residual_tilt_type" minOccurs="0"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="zemlin_tableau">
-        <xs:complexType/>
-      </xs:element>
-      <xs:element name="coma_free">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="residual_tilt" type="residual_tilt_type" minOccurs="0"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="other">
-        <xs:complexType/>
-      </xs:element>
-      <xs:element name="legacy">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="astigmatism" type="xs:string"/>
-            <xs:element name="electron_beam_tilt_params" type="xs:string"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-    </xs:choice>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / alignment_procedure / none

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="none">
-  <xs:complexType/>
-</xs:element>

-

-

-

-

Element base_microscopy_type / alignment_procedure / basic

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

residual_tilt{0,1}

-

Children

residual_tilt

-

Instance

-

-

-

- - - - -

-

<basic>
-  <residual_tilt units="mrad">{0,1}</residual_tilt>
-</basic>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="basic">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="residual_tilt" type="residual_tilt_type" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / alignment_procedure / basic / residual_tilt

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

residual_tilt_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	mrad	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="residual_tilt" type="residual_tilt_type" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / alignment_procedure / zemlin_tableau

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="zemlin_tableau">
-  <xs:complexType/>
-</xs:element>

-

-

-

-

Element base_microscopy_type / alignment_procedure / coma_free

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

residual_tilt{0,1}

-

Children

residual_tilt

-

Instance

-

-

-

- - - - -

-

<coma_free>
-  <residual_tilt units="mrad">{0,1}</residual_tilt>
-</coma_free>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="coma_free">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="residual_tilt" type="residual_tilt_type" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / alignment_procedure / coma_free / residual_tilt

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

residual_tilt_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	mrad	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="residual_tilt" type="residual_tilt_type" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / alignment_procedure / other

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="other">
-  <xs:complexType/>
-</xs:element>

-

-

-

-

Element base_microscopy_type / alignment_procedure / legacy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

astigmatism , electron_beam_tilt_params

-

Children

astigmatism, electron_beam_tilt_params

-

Instance

-

-

-

- - - - -

-

<legacy>
-  <astigmatism>{1,1}</astigmatism>
-  <electron_beam_tilt_params>{1,1}</electron_beam_tilt_params>
-</legacy>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="legacy">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="astigmatism" type="xs:string"/>
-      <xs:element name="electron_beam_tilt_params" type="xs:string"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / alignment_procedure / legacy / astigmatism

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="astigmatism" type="xs:string"/>

-

-

-

-

Element base_microscopy_type / alignment_procedure / legacy / electron_beam_tilt_params

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="electron_beam_tilt_params" type="xs:string"/>

-

-

-

-

Element base_microscopy_type / specialist_optics

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

specialist_optics_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

phase_plate{0,1} , sph_aberration_corrector{0,1} , chr_aberration_corrector{0,1} , energy_filter{0,1} , details{0,1}

-

Children

chr_aberration_corrector, details, energy_filter, phase_plate, sph_aberration_corrector

-

Instance

-

-

-

- - - - -

-

<specialist_optics>
-  <phase_plate>{0,1}</phase_plate>
-  <sph_aberration_corrector>{0,1}</sph_aberration_corrector>
-  <chr_aberration_corrector>{0,1}</chr_aberration_corrector>
-  <energy_filter>{0,1}</energy_filter>
-  <details>{0,1}</details>
-</specialist_optics>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="specialist_optics" type="specialist_optics_type" minOccurs="0"/>

-

-

-

-

Element specialist_optics_type / phase_plate

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	ZERNIKE PHASE PLATE	- -
enumeration	VOLTA PHASE PLATE	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="phase_plate" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="ZERNIKE PHASE PLATE"/>
-      <xs:enumeration value="VOLTA PHASE PLATE"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element specialist_optics_type / sph_aberration_corrector

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sph_aberration_corrector" type="xs:token" minOccurs="0"/>

-

-

-

-

Element specialist_optics_type / chr_aberration_corrector

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="chr_aberration_corrector" type="xs:token" minOccurs="0"/>

-

-

-

-

Element specialist_optics_type / energy_filter

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

name{0,1} , slit_width{0,1} , lower_energy_threshold{0,1} , upper_energy_threshold{0,1}

-

Children

lower_energy_threshold, name, slit_width, upper_energy_threshold

-

Instance

-

-

-

- - - - -

-

<energy_filter>
-  <name>{0,1}</name>
-  <slit_width units="eV">{0,1}</slit_width>
-  <lower_energy_threshold units="eV">{0,1}</lower_energy_threshold>
-  <upper_energy_threshold units="eV">{0,1}</upper_energy_threshold>
-</energy_filter>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="energy_filter" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="name" type="xs:token" minOccurs="0"/>
-      <xs:element name="slit_width" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_energy_filter_width">
-              <xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="lower_energy_threshold" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_energy_window">
-              <xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="upper_energy_threshold" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_energy_window">
-              <xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element specialist_optics_type / energy_filter / name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="name" type="xs:token" minOccurs="0"/>

-

-

-

-

Element specialist_optics_type / energy_filter / slit_width

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_energy_filter_width

Type hierarchy

-

xs:float
- allowed_energy_filter_width
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	eV	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="slit_width" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_energy_filter_width">
-        <xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element specialist_optics_type / energy_filter / lower_energy_threshold

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_energy_window

Type hierarchy

-

xs:float
- allowed_energy_window
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	eV	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="lower_energy_threshold" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_energy_window">
-        <xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element specialist_optics_type / energy_filter / upper_energy_threshold

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_energy_window

Type hierarchy

-

xs:float
- allowed_energy_window
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	eV	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="upper_energy_threshold" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_energy_window">
-        <xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element specialist_optics_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element software_list_type / software

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

name{0,1} , version{0,1} , processing_details{0,1}

-

Children

name, processing_details, version

-

Instance

-

-

-

- - - - -

-

<software>
-  <name>{0,1}</name>
-  <version>{0,1}</version>
-  <processing_details>{0,1}</processing_details>
-</software>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software" type="software_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element software_type / name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="name" type="xs:token" minOccurs="0"/>

-

-

-

-

Element software_type / version

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="version" type="xs:token" minOccurs="0"/>

-

-

-

-

Element software_type / processing_details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="processing_details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / date

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:date

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="date" type="xs:date" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / image_recording_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

image_recording

-

Children

image_recording

-

Instance

-

-

-

- - - - -

-

<image_recording_list>
-  <image_recording image_recording_id="">{1,1}</image_recording>
-</image_recording_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="image_recording_list">
-  <xs:complexType>
-    <xs:sequence maxOccurs="unbounded">
-      <xs:element name="image_recording">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="film_or_detector_model">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="allowed_film_or_detector_model">
-                    <xs:attribute name="category">
-                      <xs:simpleType>
-                        <xs:restriction base="xs:string">
-                          <xs:enumeration value="CCD"/>
-                          <xs:enumeration value="CMOS"/>
-                          <xs:enumeration value="DIRECT ELECTRON DETECTOR"/>
-                          <xs:enumeration value="STORAGE PHOSPOR (IMAGE PLATES)"/>
-                          <xs:enumeration value="FILM"/>
-                        </xs:restriction>
-                      </xs:simpleType>
-                    </xs:attribute>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="detector_mode" minOccurs="0">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="COUNTING"/>
-                  <xs:enumeration value="INTEGRATING"/>
-                  <xs:enumeration value="OTHER"/>
-                  <xs:enumeration value="SUPER-RESOLUTION"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-            <xs:element name="digitization_details" minOccurs="0">
-              <xs:complexType>
-                <xs:sequence>
-                  <xs:element name="scanner" minOccurs="0">
-                    <xs:simpleType>
-                      <xs:restriction base="xs:token">
-                        <xs:enumeration value="EIKONIX IEEE 488"/>
-                        <xs:enumeration value="EMIL 10"/>
-                        <xs:enumeration value="IMACON"/>
-                        <xs:enumeration value="NIKON COOLSCAN"/>
-                        <xs:enumeration value="NIKON SUPER COOLSCAN 9000"/>
-                        <xs:enumeration value="OPTRONICS"/>
-                        <xs:enumeration value="OTHER"/>
-                        <xs:enumeration value="PATCHWORK DENSITOMETER"/>
-                        <xs:enumeration value="PERKIN ELMER"/>
-                        <xs:enumeration value="PRIMESCAN"/>
-                        <xs:enumeration value="TEMSCAN"/>
-                        <xs:enumeration value="ZEISS SCAI"/>
-                      </xs:restriction>
-                    </xs:simpleType>
-                  </xs:element>
-                  <xs:element name="dimensions" minOccurs="0">
-                    <xs:complexType>
-                      <xs:sequence>
-                        <xs:element name="width" minOccurs="0">
-                          <xs:complexType>
-                            <xs:simpleContent>
-                              <xs:extension base="xs:positiveInteger">
-                                <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-                              </xs:extension>
-                            </xs:simpleContent>
-                          </xs:complexType>
-                        </xs:element>
-                        <xs:element name="height" minOccurs="0">
-                          <xs:complexType>
-                            <xs:simpleContent>
-                              <xs:extension base="xs:positiveInteger">
-                                <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-                              </xs:extension>
-                            </xs:simpleContent>
-                          </xs:complexType>
-                        </xs:element>
-                      </xs:sequence>
-                    </xs:complexType>
-                  </xs:element>
-                  <xs:element name="sampling_interval" minOccurs="0">
-                    <xs:complexType>
-                      <xs:simpleContent>
-                        <xs:extension base="allowed_scaning_interval">
-                          <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-                        </xs:extension>
-                      </xs:simpleContent>
-                    </xs:complexType>
-                  </xs:element>
-                  <xs:element name="frames_per_image" type="xs:token" minOccurs="0"/>
-                </xs:sequence>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="number_grids_imaged" type="xs:positiveInteger" minOccurs="0"/>
-            <xs:element name="number_real_images" type="xs:positiveInteger" minOccurs="0"/>
-            <xs:element name="number_diffraction_images" type="xs:positiveInteger" minOccurs="0"/>
-            <xs:element name="average_exposure_time" minOccurs="0">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="allowed_average_exposure_time_type">
-                    <xs:attribute name="units" type="xs:token" fixed="s" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="average_electron_dose_per_image" minOccurs="0">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="allowed_electron_dose">
-                    <xs:attribute name="units" type="xs:token" fixed="e/Å^2" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="detector_distance" type="xs:string" minOccurs="0"/>
-            <xs:element name="details" type="xs:string" minOccurs="0"/>
-            <xs:element name="od_range" type="xs:float" minOccurs="0"/>
-            <xs:element name="bits_per_pixel" type="xs:float" minOccurs="0"/>
-          </xs:sequence>
-          <xs:attribute name="image_recording_id" type="xs:positiveInteger"/>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

film_or_detector_model , detector_mode{0,1} , digitization_details{0,1} , number_grids_imaged{0,1} , number_real_images{0,1} , number_diffraction_images{0,1} , average_exposure_time{0,1} , average_electron_dose_per_image{0,1} , detector_distance{0,1} , details{0,1} , od_range{0,1} , bits_per_pixel{0,1}

-

Children

average_electron_dose_per_image, average_exposure_time, bits_per_pixel, details, detector_distance, detector_mode, digitization_details, film_or_detector_model, number_diffraction_images, number_grids_imaged, number_real_images, od_range

-

Instance

-

-

-

- - - - -

-

<image_recording image_recording_id="">
-  <film_or_detector_model category="">{1,1}</film_or_detector_model>
-  <detector_mode>{0,1}</detector_mode>
-  <digitization_details>{0,1}</digitization_details>
-  <number_grids_imaged>{0,1}</number_grids_imaged>
-  <number_real_images>{0,1}</number_real_images>
-  <number_diffraction_images>{0,1}</number_diffraction_images>
-  <average_exposure_time units="s">{0,1}</average_exposure_time>
-  <average_electron_dose_per_image units="e/Å^2">{0,1}</average_electron_dose_per_image>
-  <detector_distance>{0,1}</detector_distance>
-  <details>{0,1}</details>
-  <od_range>{0,1}</od_range>
-  <bits_per_pixel>{0,1}</bits_per_pixel>
-</image_recording>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_recording_id	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="image_recording">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="film_or_detector_model">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_film_or_detector_model">
-              <xs:attribute name="category">
-                <xs:simpleType>
-                  <xs:restriction base="xs:string">
-                    <xs:enumeration value="CCD"/>
-                    <xs:enumeration value="CMOS"/>
-                    <xs:enumeration value="DIRECT ELECTRON DETECTOR"/>
-                    <xs:enumeration value="STORAGE PHOSPOR (IMAGE PLATES)"/>
-                    <xs:enumeration value="FILM"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="detector_mode" minOccurs="0">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="COUNTING"/>
-            <xs:enumeration value="INTEGRATING"/>
-            <xs:enumeration value="OTHER"/>
-            <xs:enumeration value="SUPER-RESOLUTION"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="digitization_details" minOccurs="0">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="scanner" minOccurs="0">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="EIKONIX IEEE 488"/>
-                  <xs:enumeration value="EMIL 10"/>
-                  <xs:enumeration value="IMACON"/>
-                  <xs:enumeration value="NIKON COOLSCAN"/>
-                  <xs:enumeration value="NIKON SUPER COOLSCAN 9000"/>
-                  <xs:enumeration value="OPTRONICS"/>
-                  <xs:enumeration value="OTHER"/>
-                  <xs:enumeration value="PATCHWORK DENSITOMETER"/>
-                  <xs:enumeration value="PERKIN ELMER"/>
-                  <xs:enumeration value="PRIMESCAN"/>
-                  <xs:enumeration value="TEMSCAN"/>
-                  <xs:enumeration value="ZEISS SCAI"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-            <xs:element name="dimensions" minOccurs="0">
-              <xs:complexType>
-                <xs:sequence>
-                  <xs:element name="width" minOccurs="0">
-                    <xs:complexType>
-                      <xs:simpleContent>
-                        <xs:extension base="xs:positiveInteger">
-                          <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-                        </xs:extension>
-                      </xs:simpleContent>
-                    </xs:complexType>
-                  </xs:element>
-                  <xs:element name="height" minOccurs="0">
-                    <xs:complexType>
-                      <xs:simpleContent>
-                        <xs:extension base="xs:positiveInteger">
-                          <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-                        </xs:extension>
-                      </xs:simpleContent>
-                    </xs:complexType>
-                  </xs:element>
-                </xs:sequence>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="sampling_interval" minOccurs="0">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="allowed_scaning_interval">
-                    <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="frames_per_image" type="xs:token" minOccurs="0"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="number_grids_imaged" type="xs:positiveInteger" minOccurs="0"/>
-      <xs:element name="number_real_images" type="xs:positiveInteger" minOccurs="0"/>
-      <xs:element name="number_diffraction_images" type="xs:positiveInteger" minOccurs="0"/>
-      <xs:element name="average_exposure_time" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_average_exposure_time_type">
-              <xs:attribute name="units" type="xs:token" fixed="s" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="average_electron_dose_per_image" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_electron_dose">
-              <xs:attribute name="units" type="xs:token" fixed="e/Å^2" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="detector_distance" type="xs:string" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-      <xs:element name="od_range" type="xs:float" minOccurs="0"/>
-      <xs:element name="bits_per_pixel" type="xs:float" minOccurs="0"/>
-    </xs:sequence>
-    <xs:attribute name="image_recording_id" type="xs:positiveInteger"/>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / film_or_detector_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_film_or_detector_model

Type hierarchy

-

xs:token
- allowed_film_or_detector_model
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
category	restriction of xs:string	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="film_or_detector_model">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_film_or_detector_model">
-        <xs:attribute name="category">
-          <xs:simpleType>
-            <xs:restriction base="xs:string">
-              <xs:enumeration value="CCD"/>
-              <xs:enumeration value="CMOS"/>
-              <xs:enumeration value="DIRECT ELECTRON DETECTOR"/>
-              <xs:enumeration value="STORAGE PHOSPOR (IMAGE PLATES)"/>
-              <xs:enumeration value="FILM"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / detector_mode

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	COUNTING	- -
enumeration	INTEGRATING	- -
enumeration	OTHER	- -
enumeration	SUPER-RESOLUTION	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="detector_mode" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="COUNTING"/>
-      <xs:enumeration value="INTEGRATING"/>
-      <xs:enumeration value="OTHER"/>
-      <xs:enumeration value="SUPER-RESOLUTION"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / digitization_details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

scanner{0,1} , dimensions{0,1} , sampling_interval{0,1} , frames_per_image{0,1}

-

Children

dimensions, frames_per_image, sampling_interval, scanner

-

Instance

-

-

-

- - - - -

-

<digitization_details>
-  <scanner>{0,1}</scanner>
-  <dimensions>{0,1}</dimensions>
-  <sampling_interval units="µm">{0,1}</sampling_interval>
-  <frames_per_image>{0,1}</frames_per_image>
-</digitization_details>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="digitization_details" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="scanner" minOccurs="0">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="EIKONIX IEEE 488"/>
-            <xs:enumeration value="EMIL 10"/>
-            <xs:enumeration value="IMACON"/>
-            <xs:enumeration value="NIKON COOLSCAN"/>
-            <xs:enumeration value="NIKON SUPER COOLSCAN 9000"/>
-            <xs:enumeration value="OPTRONICS"/>
-            <xs:enumeration value="OTHER"/>
-            <xs:enumeration value="PATCHWORK DENSITOMETER"/>
-            <xs:enumeration value="PERKIN ELMER"/>
-            <xs:enumeration value="PRIMESCAN"/>
-            <xs:enumeration value="TEMSCAN"/>
-            <xs:enumeration value="ZEISS SCAI"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="dimensions" minOccurs="0">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="width" minOccurs="0">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="xs:positiveInteger">
-                    <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="height" minOccurs="0">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="xs:positiveInteger">
-                    <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="sampling_interval" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_scaning_interval">
-              <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="frames_per_image" type="xs:token" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / digitization_details / scanner

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	EIKONIX IEEE 488	- -
enumeration	EMIL 10	- -
enumeration	IMACON	- -
enumeration	NIKON COOLSCAN	- -
enumeration	NIKON SUPER COOLSCAN 9000	- -
enumeration	OPTRONICS	- -
enumeration	OTHER	- -
enumeration	PATCHWORK DENSITOMETER	- -
enumeration	PERKIN ELMER	- -
enumeration	PRIMESCAN	- -
enumeration	TEMSCAN	- -
enumeration	ZEISS SCAI	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="scanner" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="EIKONIX IEEE 488"/>
-      <xs:enumeration value="EMIL 10"/>
-      <xs:enumeration value="IMACON"/>
-      <xs:enumeration value="NIKON COOLSCAN"/>
-      <xs:enumeration value="NIKON SUPER COOLSCAN 9000"/>
-      <xs:enumeration value="OPTRONICS"/>
-      <xs:enumeration value="OTHER"/>
-      <xs:enumeration value="PATCHWORK DENSITOMETER"/>
-      <xs:enumeration value="PERKIN ELMER"/>
-      <xs:enumeration value="PRIMESCAN"/>
-      <xs:enumeration value="TEMSCAN"/>
-      <xs:enumeration value="ZEISS SCAI"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / digitization_details / dimensions

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

width{0,1} , height{0,1}

-

Children

height, width

-

Instance

-

-

-

- - - - -

-

<dimensions>
-  <width units="pixel">{0,1}</width>
-  <height units="pixel">{0,1}</height>
-</dimensions>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="dimensions" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="width" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:positiveInteger">
-              <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="height" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:positiveInteger">
-              <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / digitization_details / dimensions / width

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	pixel	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="width" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:positiveInteger">
-        <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / digitization_details / dimensions / height

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	pixel	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="height" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:positiveInteger">
-        <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / digitization_details / sampling_interval

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_scaning_interval

Type hierarchy

-

xs:float
- allowed_scaning_interval
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	µm	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sampling_interval" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_scaning_interval">
-        <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / digitization_details / frames_per_image

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="frames_per_image" type="xs:token" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / number_grids_imaged

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_grids_imaged" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / number_real_images

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_real_images" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / number_diffraction_images

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_diffraction_images" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / average_exposure_time

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_average_exposure_time_type

Type hierarchy

-

xs:float
- allowed_average_exposure_time_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	s	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="average_exposure_time" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_average_exposure_time_type">
-        <xs:attribute name="units" type="xs:token" fixed="s" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / average_electron_dose_per_image

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_electron_dose

Type hierarchy

-

xs:float
- allowed_electron_dose
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	e/Å^2	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="average_electron_dose_per_image" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_electron_dose">
-        <xs:attribute name="units" type="xs:token" fixed="e/Å^2" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / detector_distance

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="detector_distance" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / od_range

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="od_range" type="xs:float" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / image_recording_list / image_recording / bits_per_pixel

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="bits_per_pixel" type="xs:float" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / specimen_holder

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="specimen_holder" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / tilt_angle_min

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tilt_angle_min" type="xs:string" minOccurs="0"/>

-

-

-

-

Element base_microscopy_type / tilt_angle_max

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tilt_angle_max" type="xs:string" minOccurs="0"/>

-

-

-

-

Element image_processing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

base_image_processing_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
abstract	true

-

-

Substitution Group

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

structure_determination_type

-

-

Model

-

-

image_recording_id , details{0,1}

-

Children

details, image_recording_id

-

Instance

-

-

-

- - - - -

-

<image_processing image_processing_id="">
-  <image_recording_id>{1,1}</image_recording_id>
-  <details>{0,1}</details>
-</image_processing>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="image_processing" type="base_image_processing_type" abstract="true"/>

-

-

-

-

Element base_image_processing_type / image_recording_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="image_recording_id" type="xs:positiveInteger"/>

-

-

-

-

Element base_image_processing_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:token" minOccurs="0"/>

-

-

-

-

Element entry_type / map

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

map_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

file , symmetry{0,1} , data_type , dimensions , origin , spacing , cell , axis_order , statistics{0,1} , pixel_spacing , contour_list{0,1} , label{0,1} , annotation_details{0,1} , details{0,1}

-

Children

annotation_details, axis_order, cell, contour_list, data_type, details, dimensions, file, label, origin, pixel_spacing, spacing, statistics, symmetry

-

Instance

-

-

-

- - - - -

-

<map format="CCP4" size_kbytes="">
-  <file>{1,1}</file>
-  <symmetry>{0,1}</symmetry>
-  <data_type>{1,1}</data_type>
-  <dimensions>{1,1}</dimensions>
-  <origin>{1,1}</origin>
-  <spacing>{1,1}</spacing>
-  <cell>{1,1}</cell>
-  <axis_order>{1,1}</axis_order>
-  <statistics>{0,1}</statistics>
-  <pixel_spacing>{1,1}</pixel_spacing>
-  <contour_list>{0,1}</contour_list>
-  <label>{0,1}</label>
-  <annotation_details>{0,1}</annotation_details>
-  <details>{0,1}</details>
-</map>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
format		CCP4	required	- -
size_kbytes	xs:positiveInteger		required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="map" type="map_type"/>

-

-

-

-

Element map_type / file

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

emd_\d{4,}([A-Za-z0-9_]*)\.map(\.gz|)

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="file">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="emd_\d{4,}([A-Za-z0-9_]*)\.map(\.gz|)"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element map_type / symmetry

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

applied_symmetry_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

space_group | point_group | helical_parameters

-

Children

helical_parameters, point_group, space_group

-

Instance

-

-

-

- - - - -

-

<symmetry>
-  <space_group>{1,1}</space_group>
-  <point_group>{1,1}</point_group>
-  <helical_parameters>{1,1}</helical_parameters>
-</symmetry>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="symmetry" type="applied_symmetry_type" minOccurs="0"/>

-

-

-

-

Element applied_symmetry_type / space_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:int

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="space_group" type="xs:int"/>

-

-

-

-

Element applied_symmetry_type / point_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of point_group_symmetry_type

Type hierarchy

-

xs:token
- point_group_symmetry_type
-

-

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

(C\d+|D\d+|O|T|I) & (C\d+|D\d+|O|T|I)

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="point_group">
-  <xs:simpleType>
-    <xs:restriction base="point_group_symmetry_type">
-      <xs:pattern value="C\d+|D\d+|O|T|I"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element applied_symmetry_type / helical_parameters

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

helical_parameters_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

delta_z , delta_phi , axial_symmetry

-

Children

axial_symmetry, delta_phi, delta_z

-

Instance

-

-

-

- - - - -

-

<helical_parameters>
-  <delta_z units="Å">{1,1}</delta_z>
-  <delta_phi units="deg">{1,1}</delta_phi>
-  <axial_symmetry>{1,1}</axial_symmetry>
-</helical_parameters>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="helical_parameters" type="helical_parameters_type"/>

-

-

-

-

Element helical_parameters_type / delta_z

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_rise_type

Type hierarchy

-

xs:float
- allowed_rise_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="delta_z">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_rise_type">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element helical_parameters_type / delta_phi

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_twist_type

Type hierarchy

-

xs:float
- allowed_twist_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="delta_phi">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_twist_type">
-        <xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element helical_parameters_type / axial_symmetry

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[C|D][1-9][0-9]*

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="axial_symmetry">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="[C|D][1-9][0-9]*"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element map_type / data_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

map_data_type

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	IMAGE STORED AS SIGNED BYTE	- -
enumeration	IMAGE STORED AS SIGNED INTEGER (2 BYTES)	- -
enumeration	IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="data_type" type="map_data_type"/>

-

-

-

-

Element map_type / dimensions

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

integer_vector_map_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

col , row , sec

-

Children

col, row, sec

-

Instance

-

-

-

- - - - -

-

<dimensions>
-  <col>{1,1}</col>
-  <row>{1,1}</row>
-  <sec>{1,1}</sec>
-</dimensions>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="dimensions" type="integer_vector_map_type"/>

-

-

-

-

Element integer_vector_map_type / col

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="col" type="xs:positiveInteger"/>

-

-

-

-

Element integer_vector_map_type / row

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="row" type="xs:positiveInteger"/>

-

-

-

-

Element integer_vector_map_type / sec

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sec" type="xs:positiveInteger"/>

-

-

-

-

Element map_type / origin

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

col , row , sec

-

Children

col, row, sec

-

Instance

-

-

-

- - - - -

-

<origin>
-  <col>{1,1}</col>
-  <row>{1,1}</row>
-  <sec>{1,1}</sec>
-</origin>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="origin">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="col" type="xs:integer"/>
-      <xs:element name="row" type="xs:integer"/>
-      <xs:element name="sec" type="xs:integer"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element map_type / origin / col

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:integer

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="col" type="xs:integer"/>

-

-

-

-

Element map_type / origin / row

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:integer

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="row" type="xs:integer"/>

-

-

-

-

Element map_type / origin / sec

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:integer

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sec" type="xs:integer"/>

-

-

-

-

Element map_type / spacing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

x , y , z

-

Children

x, y, z

-

Instance

-

-

-

- - - - -

-

<spacing>
-  <x>{1,1}</x>
-  <y>{1,1}</y>
-  <z>{1,1}</z>
-</spacing>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="spacing">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="x" type="xs:positiveInteger"/>
-      <xs:element name="y" type="xs:nonNegativeInteger"/>
-      <xs:element name="z" type="xs:nonNegativeInteger"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element map_type / spacing / x

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="x" type="xs:positiveInteger"/>

-

-

-

-

Element map_type / spacing / y

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:nonNegativeInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="y" type="xs:nonNegativeInteger"/>

-

-

-

-

Element map_type / spacing / z

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:nonNegativeInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="z" type="xs:nonNegativeInteger"/>

-

-

-

-

Element map_type / cell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

a , b , c , alpha , beta , gamma

-

Children

a, alpha, b, beta, c, gamma

-

Instance

-

-

-

- - - - -

-

<cell>
-  <a units="Å">{1,1}</a>
-  <b units="Å">{1,1}</b>
-  <c units="Å">{1,1}</c>
-  <alpha units="deg">{1,1}</alpha>
-  <beta units="deg">{1,1}</beta>
-  <gamma units="deg">{1,1}</gamma>
-</cell>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cell">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="a" type="cell_type"/>
-      <xs:element name="b" type="cell_type"/>
-      <xs:element name="c" type="cell_type"/>
-      <xs:element name="alpha" type="cell_angle_type"/>
-      <xs:element name="beta" type="cell_angle_type"/>
-      <xs:element name="gamma" type="cell_angle_type"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element map_type / cell / a

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_type

Type hierarchy

-

xs:float
- allowed_cell_dim
  - cell_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="a" type="cell_type"/>

-

-

-

-

Element map_type / cell / b

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_type

Type hierarchy

-

xs:float
- allowed_cell_dim
  - cell_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="b" type="cell_type"/>

-

-

-

-

Element map_type / cell / c

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_type

Type hierarchy

-

xs:float
- allowed_cell_dim
  - cell_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="c" type="cell_type"/>

-

-

-

-

Element map_type / cell / alpha

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_angle_type

Type hierarchy

-

xs:float
- allowed_cell_angle
  - cell_angle_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="alpha" type="cell_angle_type"/>

-

-

-

-

Element map_type / cell / beta

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_angle_type

Type hierarchy

-

xs:float
- allowed_cell_angle
  - cell_angle_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="beta" type="cell_angle_type"/>

-

-

-

-

Element map_type / cell / gamma

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_angle_type

Type hierarchy

-

xs:float
- allowed_cell_angle
  - cell_angle_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="gamma" type="cell_angle_type"/>

-

-

-

-

Element map_type / axis_order

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

fast , medium , slow

-

Children

fast, medium, slow

-

Instance

-

-

-

- - - - -

-

<axis_order>
-  <fast>{1,1}</fast>
-  <medium>{1,1}</medium>
-  <slow>{1,1}</slow>
-</axis_order>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="axis_order">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="fast">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:pattern value="X|Y|Z"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="medium">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:pattern value="X|Y|Z"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="slow">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:pattern value="X|Y|Z"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element map_type / axis_order / fast

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

X|Y|Z

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="fast">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="X|Y|Z"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element map_type / axis_order / medium

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

X|Y|Z

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="medium">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="X|Y|Z"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element map_type / axis_order / slow

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

X|Y|Z

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="slow">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="X|Y|Z"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element map_type / statistics

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

map_statistics_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

minimum , maximum , average , std

-

Children

average, maximum, minimum, std

-

Instance

-

-

-

- - - - -

-

<statistics>
-  <minimum>{1,1}</minimum>
-  <maximum>{1,1}</maximum>
-  <average>{1,1}</average>
-  <std>{1,1}</std>
-</statistics>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="statistics" type="map_statistics_type" minOccurs="0"/>

-

-

-

-

Element map_statistics_type / minimum

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="minimum" type="xs:float"/>

-

-

-

-

Element map_statistics_type / maximum

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="maximum" type="xs:float"/>

-

-

-

-

Element map_statistics_type / average

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="average" type="xs:float"/>

-

-

-

-

Element map_statistics_type / std

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="std" type="xs:float"/>

-

-

-

-

Element map_type / pixel_spacing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

x , y , z

-

Children

x, y, z

-

Instance

-

-

-

- - - - -

-

<pixel_spacing>
-  <x units="Å">{1,1}</x>
-  <y units="Å">{1,1}</y>
-  <z units="Å">{1,1}</z>
-</pixel_spacing>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="pixel_spacing">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="x" type="pixel_spacing_type"/>
-      <xs:element name="y" type="pixel_spacing_type"/>
-      <xs:element name="z" type="pixel_spacing_type"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element map_type / pixel_spacing / x

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pixel_spacing_type

Type hierarchy

-

xs:float
- allowed_pixel_sampling
  - pixel_spacing_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="x" type="pixel_spacing_type"/>

-

-

-

-

Element map_type / pixel_spacing / y

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pixel_spacing_type

Type hierarchy

-

xs:float
- allowed_pixel_sampling
  - pixel_spacing_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="y" type="pixel_spacing_type"/>

-

-

-

-

Element map_type / pixel_spacing / z

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pixel_spacing_type

Type hierarchy

-

xs:float
- allowed_pixel_sampling
  - pixel_spacing_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="z" type="pixel_spacing_type"/>

-

-

-

-

Element map_type / contour_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

contour+

-

Children

contour

-

Instance

-

-

-

- - - - -

-

<contour_list>
-  <contour primary="">{1,unbounded}</contour>
-</contour_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="contour_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="contour" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="level" type="xs:float" minOccurs="0"/>
-            <xs:element name="source" minOccurs="0">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="EMDB"/>
-                  <xs:enumeration value="AUTHOR"/>
-                  <xs:enumeration value="SOFTWARE"/>
-                  <xs:enumeration value="ANNOTATOR"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-          </xs:sequence>
-          <xs:attribute name="primary" type="xs:boolean" use="required"/>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element map_type / contour_list / contour

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

level{0,1} , source{0,1}

-

Children

level, source

-

Instance

-

-

-

- - - - -

-

<contour primary="">
-  <level>{0,1}</level>
-  <source>{0,1}</source>
-</contour>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
primary	xs:boolean	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="contour" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="level" type="xs:float" minOccurs="0"/>
-      <xs:element name="source" minOccurs="0">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="EMDB"/>
-            <xs:enumeration value="AUTHOR"/>
-            <xs:enumeration value="SOFTWARE"/>
-            <xs:enumeration value="ANNOTATOR"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-    <xs:attribute name="primary" type="xs:boolean" use="required"/>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element map_type / contour_list / contour / level

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="level" type="xs:float" minOccurs="0"/>

-

-

-

-

Element map_type / contour_list / contour / source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	EMDB	- -
enumeration	AUTHOR	- -
enumeration	SOFTWARE	- -
enumeration	ANNOTATOR	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="source" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="EMDB"/>
-      <xs:enumeration value="AUTHOR"/>
-      <xs:enumeration value="SOFTWARE"/>
-      <xs:enumeration value="ANNOTATOR"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element map_type / label

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="label" type="xs:token" minOccurs="0"/>

-

-

-

-

Element map_type / annotation_details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="annotation_details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element map_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element entry_type / interpretation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

interpretation_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

modelling_list{0,1} , figure_list{0,1} , segmentation_list{0,1} , slices_list{0,1} , additional_map_list{0,1} , half_map_list{0,1}

-

Children

additional_map_list, figure_list, half_map_list, modelling_list, segmentation_list, slices_list

-

Instance

-

-

-

- - - - -

-

<interpretation>
-  <modelling_list>{0,1}</modelling_list>
-  <figure_list>{0,1}</figure_list>
-  <segmentation_list>{0,1}</segmentation_list>
-  <slices_list>{0,1}</slices_list>
-  <additional_map_list>{0,1}</additional_map_list>
-  <half_map_list>{0,1}</half_map_list>
-</interpretation>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="interpretation" type="interpretation_type" minOccurs="0"/>

-

-

-

-

Element interpretation_type / modelling_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

modelling+

-

Children

modelling

-

Instance

-

-

-

- - - - -

-

<modelling_list>
-  <modelling>{1,unbounded}</modelling>
-</modelling_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="modelling_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="modelling" type="modelling_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element interpretation_type / modelling_list / modelling

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

modelling_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

initial_model* , final_model{0,1} , refinement_protocol{0,1} , software_list{0,1} , details{0,1} , target_criteria{0,1} , refinement_space{0,1} , overall_bvalue{0,1}

-

Children

details, final_model, initial_model, overall_bvalue, refinement_protocol, refinement_space, software_list, target_criteria

-

Instance

-

-

-

- - - - -

-

<modelling>
-  <initial_model>{0,unbounded}</initial_model>
-  <final_model>{0,1}</final_model>
-  <refinement_protocol>{0,1}</refinement_protocol>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <target_criteria>{0,1}</target_criteria>
-  <refinement_space>{0,1}</refinement_space>
-  <overall_bvalue>{0,1}</overall_bvalue>
-</modelling>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="modelling" type="modelling_type" maxOccurs="unbounded"/>

-

-

-

-

Element modelling_type / initial_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

access_code{0,1} , chain{0,1} , details{0,1}

-

Children

access_code, chain, details

-

Instance

-

-

-

- - - - -

-

<initial_model>
-  <access_code>{0,1}</access_code>
-  <chain>{0,1}</chain>
-  <details>{0,1}</details>
-</initial_model>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="initial_model" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="access_code" type="xs:token" minOccurs="0">
-      </xs:element>
-      <xs:element minOccurs="0" name="chain">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element minOccurs="0" name="chain_id" type="xs:token"/>
-            <xs:element minOccurs="0" name="residue_range">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:pattern value="\d+-\d+"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-            <xs:element minOccurs="0" name="number_of_copies_in_final_model" type="xs:positiveInteger"/>
-            <xs:element maxOccurs="1" minOccurs="0" name="source_name">
-              <xs:simpleType>
-                <xs:restriction base="xs:string">
-                  <xs:enumeration value="PDB"/>
-                  <xs:enumeration value="AlphaFold"/>
-                  <xs:enumeration value="ITasser"/>
-                  <xs:enumeration value="ModelArchive"/>
-                  <xs:enumeration value="Modeller"/>
-                  <xs:enumeration value="RoseTTAFold"/>
-                  <xs:enumeration value="SwissModel"/>
-                  <xs:enumeration value="Other"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-            <xs:element maxOccurs="1" minOccurs="0" name="initial_model_type">
-              <xs:simpleType>
-                <xs:restriction base="xs:string">
-                  <xs:enumeration value="experimental model"/>
-                  <xs:enumeration value="in silico model"/>
-                  <xs:enumeration value="integrative model"/>
-                  <xs:enumeration value="other"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element minOccurs="0" name="details" type="xs:string"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element modelling_type / initial_model / access_code

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="access_code" type="xs:token" minOccurs="0">
-</xs:element>

-

-

-

-

Element modelling_type / initial_model / chain

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

chain_id{0,1} , residue_range{0,1} , number_of_copies_in_final_model{0,1} , source_name{0,1} , initial_model_type{0,1}

-

Children

chain_id, initial_model_type, number_of_copies_in_final_model, residue_range, source_name

-

Instance

-

-

-

- - - - -

-

<chain>
-  <chain_id>{0,1}</chain_id>
-  <residue_range>{0,1}</residue_range>
-  <number_of_copies_in_final_model>{0,1}</number_of_copies_in_final_model>
-  <source_name>{0,1}</source_name>
-  <initial_model_type>{0,1}</initial_model_type>
-</chain>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="chain">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element minOccurs="0" name="chain_id" type="xs:token"/>
-      <xs:element minOccurs="0" name="residue_range">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:pattern value="\d+-\d+"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element minOccurs="0" name="number_of_copies_in_final_model" type="xs:positiveInteger"/>
-      <xs:element maxOccurs="1" minOccurs="0" name="source_name">
-        <xs:simpleType>
-          <xs:restriction base="xs:string">
-            <xs:enumeration value="PDB"/>
-            <xs:enumeration value="AlphaFold"/>
-            <xs:enumeration value="ITasser"/>
-            <xs:enumeration value="ModelArchive"/>
-            <xs:enumeration value="Modeller"/>
-            <xs:enumeration value="RoseTTAFold"/>
-            <xs:enumeration value="SwissModel"/>
-            <xs:enumeration value="Other"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element maxOccurs="1" minOccurs="0" name="initial_model_type">
-        <xs:simpleType>
-          <xs:restriction base="xs:string">
-            <xs:enumeration value="experimental model"/>
-            <xs:enumeration value="in silico model"/>
-            <xs:enumeration value="integrative model"/>
-            <xs:enumeration value="other"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element modelling_type / initial_model / chain / chain_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="chain_id" type="xs:token"/>

-

-

-

-

Element modelling_type / initial_model / chain / residue_range

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d+-\d+

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="residue_range">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="\d+-\d+"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element modelling_type / initial_model / chain / number_of_copies_in_final_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="number_of_copies_in_final_model" type="xs:positiveInteger"/>

-

-

-

-

Element modelling_type / initial_model / chain / source_name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:string

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	PDB	- -
enumeration	AlphaFold	- -
enumeration	ITasser	- -
enumeration	ModelArchive	- -
enumeration	Modeller	- -
enumeration	RoseTTAFold	- -
enumeration	SwissModel	- -
enumeration	Other	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element maxOccurs="1" minOccurs="0" name="source_name">
-  <xs:simpleType>
-    <xs:restriction base="xs:string">
-      <xs:enumeration value="PDB"/>
-      <xs:enumeration value="AlphaFold"/>
-      <xs:enumeration value="ITasser"/>
-      <xs:enumeration value="ModelArchive"/>
-      <xs:enumeration value="Modeller"/>
-      <xs:enumeration value="RoseTTAFold"/>
-      <xs:enumeration value="SwissModel"/>
-      <xs:enumeration value="Other"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element modelling_type / initial_model / chain / initial_model_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:string

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	experimental model	- -
enumeration	in silico model	- -
enumeration	integrative model	- -
enumeration	other	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element maxOccurs="1" minOccurs="0" name="initial_model_type">
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-    <xs:restriction base="xs:string">
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-      <xs:enumeration value="integrative model"/>
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-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element modelling_type / initial_model / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="details" type="xs:string"/>

-

-

-

-

Element modelling_type / final_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

access_code , chain* , details{0,1}

-

Children

access_code, chain, details

-

Instance

-

-

-

- - - - -

-

<final_model>
-  <access_code>{1,1}</access_code>
-  <chain>{0,unbounded}</chain>
-  <details>{0,1}</details>
-</final_model>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_model" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
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-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element modelling_type / final_model / access_code

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pdb_code_type

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d[\dA-Za-z]{3}|pdb_\d{5}[\dA-Za-z]{3}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="access_code" type="pdb_code_type"/>

-

-

-

-

Element modelling_type / final_model / chain

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

chain_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

chain_id* , residue_range{0,1}

-

Children

chain_id, residue_range

-

Instance

-

-

-

- - - - -

-

<chain>
-  <chain_id>{0,unbounded}</chain_id>
-  <residue_range>{0,1}</residue_range>
-</chain>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="chain" type="chain_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element chain_type / chain_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

chain_pdb_id

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	unbounded

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d|[A-Za-z]{1,2}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="chain_id" type="chain_pdb_id" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element chain_type / residue_range

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d+-\d+

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="residue_range" minOccurs="0" maxOccurs="1">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="\d+-\d+"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element modelling_type / final_model / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element modelling_type / refinement_protocol

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	AB INITIO MODEL	- -
enumeration	BACKBONE TRACE	- -
enumeration	FLEXIBLE FIT	- -
enumeration	OTHER	- -
enumeration	RIGID BODY FIT	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="refinement_protocol" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:string">
-      <xs:enumeration value="AB INITIO MODEL"/>
-      <xs:enumeration value="BACKBONE TRACE"/>
-      <xs:enumeration value="FLEXIBLE FIT"/>
-      <xs:enumeration value="OTHER"/>
-      <xs:enumeration value="RIGID BODY FIT"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element modelling_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element modelling_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element modelling_type / target_criteria

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="target_criteria" type="xs:token" minOccurs="0"/>

-

-

-

-

Element modelling_type / refinement_space

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="refinement_space" type="xs:token" minOccurs="0"/>

-

-

-

-

Element modelling_type / overall_bvalue

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="overall_bvalue" type="xs:float" minOccurs="0"/>

-

-

-

-

Element interpretation_type / figure_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

figure+

-

Children

figure

-

Instance

-

-

-

- - - - -

-

<figure_list>
-  <figure>{1,unbounded}</figure>
-</figure_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="figure_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="figure" type="figure_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element interpretation_type / figure_list / figure

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

figure_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Instance

-

-

-

- - - - -

-

<figure>
-  <file>{1,1}</file>
-  <details>{0,1}</details>
-</figure>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="figure" type="figure_type" maxOccurs="unbounded"/>

-

-

-

-

Element figure_type / file

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

emd_\d{4,}.+

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="file">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="emd_\d{4,}.+"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element figure_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element interpretation_type / segmentation_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

segmentation+

-

Children

segmentation

-

Instance

-

-

-

- - - - -

-

<segmentation_list>
-  <segmentation>{1,unbounded}</segmentation>
-</segmentation_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="segmentation_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="segmentation" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="file">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:pattern value="[emd_\d{4,}]+.*"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-            <xs:element name="details" type="xs:string" minOccurs="0"/>
-            <xs:element name="mask_details" type="map_type" minOccurs="0"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element interpretation_type / segmentation_list / segmentation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

file , details{0,1} , mask_details{0,1}

-

Children

details, file, mask_details

-

Instance

-

-

-

- - - - -

-

<segmentation>
-  <file>{1,1}</file>
-  <details>{0,1}</details>
-  <mask_details format="CCP4" size_kbytes="">{0,1}</mask_details>
-</segmentation>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="segmentation" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="file">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:pattern value="[emd_\d{4,}]+.*"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-      <xs:element name="mask_details" type="map_type" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element interpretation_type / segmentation_list / segmentation / file

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[emd_\d{4,}]+.*

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="file">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="[emd_\d{4,}]+.*"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element interpretation_type / segmentation_list / segmentation / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element interpretation_type / segmentation_list / segmentation / mask_details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

map_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

file , symmetry{0,1} , data_type , dimensions , origin , spacing , cell , axis_order , statistics{0,1} , pixel_spacing , contour_list{0,1} , label{0,1} , annotation_details{0,1} , details{0,1}

-

Children

annotation_details, axis_order, cell, contour_list, data_type, details, dimensions, file, label, origin, pixel_spacing, spacing, statistics, symmetry

-

Instance

-

-

-

- - - - -

-

<mask_details format="CCP4" size_kbytes="">
-  <file>{1,1}</file>
-  <symmetry>{0,1}</symmetry>
-  <data_type>{1,1}</data_type>
-  <dimensions>{1,1}</dimensions>
-  <origin>{1,1}</origin>
-  <spacing>{1,1}</spacing>
-  <cell>{1,1}</cell>
-  <axis_order>{1,1}</axis_order>
-  <statistics>{0,1}</statistics>
-  <pixel_spacing>{1,1}</pixel_spacing>
-  <contour_list>{0,1}</contour_list>
-  <label>{0,1}</label>
-  <annotation_details>{0,1}</annotation_details>
-  <details>{0,1}</details>
-</mask_details>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
format		CCP4	required	- -
size_kbytes	xs:positiveInteger		required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="mask_details" type="map_type" minOccurs="0"/>

-

-

-

-

Element interpretation_type / slices_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

slice+

-

Children

slice

-

Instance

-

-

-

- - - - -

-

<slices_list>
-  <slice format="CCP4" size_kbytes="">{1,unbounded}</slice>
-</slices_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="slices_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="slice" type="map_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element interpretation_type / slices_list / slice

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

map_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

file , symmetry{0,1} , data_type , dimensions , origin , spacing , cell , axis_order , statistics{0,1} , pixel_spacing , contour_list{0,1} , label{0,1} , annotation_details{0,1} , details{0,1}

-

Children

annotation_details, axis_order, cell, contour_list, data_type, details, dimensions, file, label, origin, pixel_spacing, spacing, statistics, symmetry

-

Instance

-

-

-

- - - - -

-

<slice format="CCP4" size_kbytes="">
-  <file>{1,1}</file>
-  <symmetry>{0,1}</symmetry>
-  <data_type>{1,1}</data_type>
-  <dimensions>{1,1}</dimensions>
-  <origin>{1,1}</origin>
-  <spacing>{1,1}</spacing>
-  <cell>{1,1}</cell>
-  <axis_order>{1,1}</axis_order>
-  <statistics>{0,1}</statistics>
-  <pixel_spacing>{1,1}</pixel_spacing>
-  <contour_list>{0,1}</contour_list>
-  <label>{0,1}</label>
-  <annotation_details>{0,1}</annotation_details>
-  <details>{0,1}</details>
-</slice>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
format		CCP4	required	- -
size_kbytes	xs:positiveInteger		required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="slice" type="map_type" maxOccurs="unbounded"/>

-

-

-

-

Element interpretation_type / additional_map_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

additional_map+

-

Children

additional_map

-

Instance

-

-

-

- - - - -

-

<additional_map_list>
-  <additional_map format="CCP4" size_kbytes="">{1,unbounded}</additional_map>
-</additional_map_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="additional_map_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="additional_map" type="map_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element interpretation_type / additional_map_list / additional_map

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

map_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

file , symmetry{0,1} , data_type , dimensions , origin , spacing , cell , axis_order , statistics{0,1} , pixel_spacing , contour_list{0,1} , label{0,1} , annotation_details{0,1} , details{0,1}

-

Children

annotation_details, axis_order, cell, contour_list, data_type, details, dimensions, file, label, origin, pixel_spacing, spacing, statistics, symmetry

-

Instance

-

-

-

- - - - -

-

<additional_map format="CCP4" size_kbytes="">
-  <file>{1,1}</file>
-  <symmetry>{0,1}</symmetry>
-  <data_type>{1,1}</data_type>
-  <dimensions>{1,1}</dimensions>
-  <origin>{1,1}</origin>
-  <spacing>{1,1}</spacing>
-  <cell>{1,1}</cell>
-  <axis_order>{1,1}</axis_order>
-  <statistics>{0,1}</statistics>
-  <pixel_spacing>{1,1}</pixel_spacing>
-  <contour_list>{0,1}</contour_list>
-  <label>{0,1}</label>
-  <annotation_details>{0,1}</annotation_details>
-  <details>{0,1}</details>
-</additional_map>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
format		CCP4	required	- -
size_kbytes	xs:positiveInteger		required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="additional_map" type="map_type" maxOccurs="unbounded"/>

-

-

-

-

Element interpretation_type / half_map_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

half_map+

-

Children

half_map

-

Instance

-

-

-

- - - - -

-

<half_map_list>
-  <half_map format="CCP4" size_kbytes="">{1,unbounded}</half_map>
-</half_map_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="half_map_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="half_map" type="map_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element interpretation_type / half_map_list / half_map

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

map_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

file , symmetry{0,1} , data_type , dimensions , origin , spacing , cell , axis_order , statistics{0,1} , pixel_spacing , contour_list{0,1} , label{0,1} , annotation_details{0,1} , details{0,1}

-

Children

annotation_details, axis_order, cell, contour_list, data_type, details, dimensions, file, label, origin, pixel_spacing, spacing, statistics, symmetry

-

Instance

-

-

-

- - - - -

-

<half_map format="CCP4" size_kbytes="">
-  <file>{1,1}</file>
-  <symmetry>{0,1}</symmetry>
-  <data_type>{1,1}</data_type>
-  <dimensions>{1,1}</dimensions>
-  <origin>{1,1}</origin>
-  <spacing>{1,1}</spacing>
-  <cell>{1,1}</cell>
-  <axis_order>{1,1}</axis_order>
-  <statistics>{0,1}</statistics>
-  <pixel_spacing>{1,1}</pixel_spacing>
-  <contour_list>{0,1}</contour_list>
-  <label>{0,1}</label>
-  <annotation_details>{0,1}</annotation_details>
-  <details>{0,1}</details>
-</half_map>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
format		CCP4	required	- -
size_kbytes	xs:positiveInteger		required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="half_map" type="map_type" maxOccurs="unbounded"/>

-

-

-

-

Element entry_type / validation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

validation_method+

-

Children

validation_method

-

Instance

-

-

-

- - - - -

-

<validation>
-  <validation_method>{1,unbounded}</validation_method>
-</validation>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="validation" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element ref="validation_method" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element validation_method

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

validation_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
abstract	true

-

-

Substitution Group

-

-

-

Used by

-

-

-

- - - - - -

Element

entry_type/validation

-

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Instance

-

-

-

- - - - -

-

<validation_method>
-  <file>{1,1}</file>
-  <details>{0,1}</details>
-</validation_method>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="validation_method" type="validation_type" abstract="true"/>

-

-

-

-

Element validation_type / file

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

emd_\d{4,}_fsc(_[1-9]{1,})*.xml

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="file">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="emd_\d{4,}_fsc(_[1-9]{1,})*.xml"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element validation_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element primary_map

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Substitution Group Affiliation

-

revision_change_sub_group

-

-

Source

-

-

-

- - - - -

-

<xs:element name="primary_map" substitutionGroup="revision_change_sub_group"/>

-

-

-

-

Element image

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

part_revision_change_type

Type hierarchy

-

base_revision_change_type
- part_revision_change_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

revision_change_sub_group

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}

-

Children

description, details, provider, revision_group, revision_type

-

Instance

-

-

-

- - - - -

-

<image part="">
-  <revision_type>{1,1}</revision_type>
-  <provider>{1,1}</provider>
-  <description>{0,1}</description>
-  <details>{0,1}</details>
-  <revision_group>{0,1}</revision_group>
-</image>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
part	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="image" substitutionGroup="revision_change_sub_group" type="part_revision_change_type"/>

-

-

-

-

Element half_map

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

part_revision_change_type

Type hierarchy

-

base_revision_change_type
- part_revision_change_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

revision_change_sub_group

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}

-

Children

description, details, provider, revision_group, revision_type

-

Instance

-

-

-

- - - - -

-

<half_map part="">
-  <revision_type>{1,1}</revision_type>
-  <provider>{1,1}</provider>
-  <description>{0,1}</description>
-  <details>{0,1}</details>
-  <revision_group>{0,1}</revision_group>
-</half_map>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
part	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="half_map" substitutionGroup="revision_change_sub_group" type="part_revision_change_type"/>

-

-

-

-

Element mask

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

part_revision_change_type

Type hierarchy

-

base_revision_change_type
- part_revision_change_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

revision_change_sub_group

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}

-

Children

description, details, provider, revision_group, revision_type

-

Instance

-

-

-

- - - - -

-

<mask part="">
-  <revision_type>{1,1}</revision_type>
-  <provider>{1,1}</provider>
-  <description>{0,1}</description>
-  <details>{0,1}</details>
-  <revision_group>{0,1}</revision_group>
-</mask>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
part	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="mask" substitutionGroup="revision_change_sub_group" type="part_revision_change_type"/>

-

-

-

-

Element fsc

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

part_revision_change_type

Type hierarchy

-

base_revision_change_type
- part_revision_change_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

revision_change_sub_group

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}

-

Children

description, details, provider, revision_group, revision_type

-

Instance

-

-

-

- - - - -

-

<fsc part="">
-  <revision_type>{1,1}</revision_type>
-  <provider>{1,1}</provider>
-  <description>{0,1}</description>
-  <details>{0,1}</details>
-  <revision_group>{0,1}</revision_group>
-</fsc>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
part	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="fsc" substitutionGroup="revision_change_sub_group" type="part_revision_change_type"/>

-

-

-

-

Element additional_map

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

part_revision_change_type

Type hierarchy

-

base_revision_change_type
- part_revision_change_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

revision_change_sub_group

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}

-

Children

description, details, provider, revision_group, revision_type

-

Instance

-

-

-

- - - - -

-

<additional_map part="">
-  <revision_type>{1,1}</revision_type>
-  <provider>{1,1}</provider>
-  <description>{0,1}</description>
-  <details>{0,1}</details>
-  <revision_group>{0,1}</revision_group>
-</additional_map>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
part	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="additional_map" substitutionGroup="revision_change_sub_group" type="part_revision_change_type"/>

-

-

-

-

Element model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

complex_revision_change_type

Type hierarchy

-

base_revision_change_type
- complex_revision_change_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

revision_change_sub_group

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1} , categories{0,1} , items{0,1}

-

Children

categories, description, details, items, provider, revision_group, revision_type

-

Instance

-

-

-

- - - - -

-

<model>
-  <revision_type>{1,1}</revision_type>
-  <provider>{1,1}</provider>
-  <description>{0,1}</description>
-  <details>{0,1}</details>
-  <revision_group>{0,1}</revision_group>
-  <categories>{0,1}</categories>
-  <items>{0,1}</items>
-</model>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="model" substitutionGroup="revision_change_sub_group" type="complex_revision_change_type"/>

-

-

-

-

Element complex_revision_change_type / categories

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

category+

-

Children

category

-

Instance

-

-

-

- - - - -

-

<categories>
-  <category part="" revision_action="" revision_type="">{1,unbounded}</category>
-</categories>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="categories" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="category" type="revision_category_or_item_type" minOccurs="1" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element complex_revision_change_type / categories / category

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

revision_category_or_item_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	1
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
part	xs:positiveInteger	optional	- -
revision_action	xs:token	required	- -
revision_type	xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="category" type="revision_category_or_item_type" minOccurs="1" maxOccurs="unbounded"/>

-

-

-

-

Element complex_revision_change_type / items

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

item+

-

Children

item

-

Instance

-

-

-

- - - - -

-

<items>
-  <item part="" revision_action="" revision_type="">{1,unbounded}</item>
-</items>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="items" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="item" type="revision_category_or_item_type" minOccurs="1" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element complex_revision_change_type / items / item

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

revision_category_or_item_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	1
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
part	xs:positiveInteger	optional	- -
revision_action	xs:token	required	- -
revision_type	xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="item" type="revision_category_or_item_type" minOccurs="1" maxOccurs="unbounded"/>

-

-

-

-

Element metadata

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

complex_revision_change_type

Type hierarchy

-

base_revision_change_type
- complex_revision_change_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

revision_change_sub_group

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1} , categories{0,1} , items{0,1}

-

Children

categories, description, details, items, provider, revision_group, revision_type

-

Instance

-

-

-

- - - - -

-

<metadata>
-  <revision_type>{1,1}</revision_type>
-  <provider>{1,1}</provider>
-  <description>{0,1}</description>
-  <details>{0,1}</details>
-  <revision_group>{0,1}</revision_group>
-  <categories>{0,1}</categories>
-  <items>{0,1}</items>
-</metadata>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="metadata" substitutionGroup="revision_change_sub_group" type="complex_revision_change_type"/>

-

-

-

-

Element journal_citation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

citation_type

-

Model

-

-

author+ , title , journal{0,1} , journal_abbreviation , country{0,1} , issue{0,1} , volume{0,1} , first_page{0,1} , last_page{0,1} , year{0,1} , language{0,1} , external_references* , details{0,1}

-

Children

author, country, details, external_references, first_page, issue, journal, journal_abbreviation, language, last_page, title, volume, year

-

Instance

-

-

-

- - - - -

-

<journal_citation published="">
-  <author ORCID="" order="">{1,unbounded}</author>
-  <title>{1,1}</title>
-  <journal>{0,1}</journal>
-  <journal_abbreviation>{1,1}</journal_abbreviation>
-  <country>{0,1}</country>
-  <issue>{0,1}</issue>
-  <volume>{0,1}</volume>
-  <first_page>{0,1}</first_page>
-  <last_page>{0,1}</last_page>
-  <year>{0,1}</year>
-  <language>{0,1}</language>
-  <external_references type="">{0,unbounded}</external_references>
-  <details>{0,1}</details>
-</journal_citation>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
published	xs:boolean	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="journal_citation" substitutionGroup="citation_type">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="author" type="author_order_type" maxOccurs="unbounded"/>
-      <xs:element name="title" type="xs:token"/>
-      <xs:element name="journal" type="xs:token" minOccurs="0"/>
-      <xs:element name="journal_abbreviation" type="xs:token"/>
-      <xs:element name="country" type="xs:token" minOccurs="0"/>
-      <xs:element name="issue" type="xs:positiveInteger" minOccurs="0"/>
-      <xs:element name="volume" type="xs:string" nillable="true" minOccurs="0"/>
-      <xs:element name="first_page" type="page_type" nillable="false" minOccurs="0"/>
-      <xs:element name="last_page" type="page_type" minOccurs="0"/>
-      <xs:element name="year" minOccurs="0">
-        <xs:simpleType>
-          <xs:restriction base="xs:gYear">
-            <xs:minInclusive value="1900"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="language" type="xs:language" minOccurs="0"/>
-      <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:token">
-              <xs:attribute name="type" use="required">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="PUBMED"/>
-                    <xs:enumeration value="DOI"/>
-                    <xs:enumeration value="ISBN"/>
-                    <xs:enumeration value="ISSN"/>
-                    <xs:enumeration value="CAS"/>
-                    <xs:whiteSpace value="collapse"/>
-                    <xs:enumeration value="CSD"/>
-                    <xs:enumeration value="MEDLINE"/>
-                    <xs:enumeration value="ASTM"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-    <xs:attribute name="published" type="xs:boolean" use="required"/>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element journal_citation / author

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

author_order_type

Type hierarchy

-

xs:anySimpleType
- author_type
  - author_ORCID_type
    - author_order_type
    -
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
ORCID	ORCID_type	optional	- -
order	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="author" type="author_order_type" maxOccurs="unbounded"/>

-

-

-

-

Element journal_citation / title

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="title" type="xs:token"/>

-

-

-

-

Element journal_citation / journal

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="journal" type="xs:token" minOccurs="0"/>

-

-

-

-

Element journal_citation / journal_abbreviation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="journal_abbreviation" type="xs:token"/>

-

-

-

-

Element journal_citation / country

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="country" type="xs:token" minOccurs="0"/>

-

-

-

-

Element journal_citation / issue

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="issue" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element journal_citation / volume

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
nillable	true

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="volume" type="xs:string" nillable="true" minOccurs="0"/>

-

-

-

-

Element journal_citation / first_page

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

page_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
nillable	false

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="first_page" type="page_type" nillable="false" minOccurs="0"/>

-

-

-

-

Element journal_citation / last_page

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

page_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="last_page" type="page_type" minOccurs="0"/>

-

-

-

-

Element journal_citation / year

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:gYear

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - -

minInclusive

1900

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="year" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:gYear">
-      <xs:minInclusive value="1900"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element journal_citation / language

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:language

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="language" type="xs:language" minOccurs="0"/>

-

-

-

-

Element journal_citation / external_references

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="PUBMED"/>
-              <xs:enumeration value="DOI"/>
-              <xs:enumeration value="ISBN"/>
-              <xs:enumeration value="ISSN"/>
-              <xs:enumeration value="CAS"/>
-              <xs:whiteSpace value="collapse"/>
-              <xs:enumeration value="CSD"/>
-              <xs:enumeration value="MEDLINE"/>
-              <xs:enumeration value="ASTM"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element journal_citation / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element non_journal_citation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

citation_type

-

Model

-

-

author+ , editor* , title , thesis_title{0,1} , chapter_title{0,1} , volume{0,1} , publisher{0,1} , publisher_location{0,1} , first_page{0,1} , last_page{0,1} , year , language{0,1} , external_references* , details{0,1}

-

Children

author, chapter_title, details, editor, external_references, first_page, language, last_page, publisher, publisher_location, thesis_title, title, volume, year

-

Instance

-

-

-

- - - - -

-

<non_journal_citation published="">
-  <author ORCID="" order="">{1,unbounded}</author>
-  <editor ORCID="" order="">{0,unbounded}</editor>
-  <title>{1,1}</title>
-  <thesis_title>{0,1}</thesis_title>
-  <chapter_title>{0,1}</chapter_title>
-  <volume>{0,1}</volume>
-  <publisher>{0,1}</publisher>
-  <publisher_location>{0,1}</publisher_location>
-  <first_page>{0,1}</first_page>
-  <last_page>{0,1}</last_page>
-  <year>{1,1}</year>
-  <language>{0,1}</language>
-  <external_references type="">{0,unbounded}</external_references>
-  <details>{0,1}</details>
-</non_journal_citation>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
published	xs:boolean	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="non_journal_citation" substitutionGroup="citation_type">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="author" type="author_order_type" maxOccurs="unbounded"/>
-      <xs:element name="editor" type="author_order_type" minOccurs="0" maxOccurs="unbounded"/>
-      <xs:element name="title" type="xs:token"/>
-      <xs:element name="thesis_title" type="xs:token" minOccurs="0"/>
-      <xs:element name="chapter_title" type="xs:token" minOccurs="0"/>
-      <xs:element name="volume" type="xs:string" minOccurs="0"/>
-      <xs:element name="publisher" type="xs:token" minOccurs="0"/>
-      <xs:element name="publisher_location" type="xs:token" minOccurs="0"/>
-      <xs:element name="first_page" type="page_type" minOccurs="0"/>
-      <xs:element name="last_page" type="page_type" minOccurs="0"/>
-      <xs:element name="year">
-        <xs:simpleType>
-          <xs:restriction base="xs:gYear">
-            <xs:minInclusive value="1900"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="language" type="xs:language" minOccurs="0"/>
-      <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:token">
-              <xs:attribute name="type" use="required">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="PUBMED"/>
-                    <xs:enumeration value="DOI"/>
-                    <xs:enumeration value="ISBN"/>
-                    <xs:enumeration value="ISSN"/>
-                    <xs:enumeration value="CAS"/>
-                    <xs:whiteSpace value="collapse"/>
-                    <xs:enumeration value="CSD"/>
-                    <xs:enumeration value="MEDLINE"/>
-                    <xs:enumeration value="ASTM"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-    <xs:attribute name="published" type="xs:boolean" use="required"/>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element non_journal_citation / author

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

author_order_type

Type hierarchy

-

xs:anySimpleType
- author_type
  - author_ORCID_type
    - author_order_type
    -
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
ORCID	ORCID_type	optional	- -
order	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="author" type="author_order_type" maxOccurs="unbounded"/>

-

-

-

-

Element non_journal_citation / editor

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

author_order_type

Type hierarchy

-

xs:anySimpleType
- author_type
  - author_ORCID_type
    - author_order_type
    -
  -
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
ORCID	ORCID_type	optional	- -
order	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="editor" type="author_order_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element non_journal_citation / title

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="title" type="xs:token"/>

-

-

-

-

Element non_journal_citation / thesis_title

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="thesis_title" type="xs:token" minOccurs="0"/>

-

-

-

-

Element non_journal_citation / chapter_title

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="chapter_title" type="xs:token" minOccurs="0"/>

-

-

-

-

Element non_journal_citation / volume

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="volume" type="xs:string" minOccurs="0"/>

-

-

-

-

Element non_journal_citation / publisher

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="publisher" type="xs:token" minOccurs="0"/>

-

-

-

-

Element non_journal_citation / publisher_location

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="publisher_location" type="xs:token" minOccurs="0"/>

-

-

-

-

Element non_journal_citation / first_page

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

page_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="first_page" type="page_type" minOccurs="0"/>

-

-

-

-

Element non_journal_citation / last_page

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

page_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="last_page" type="page_type" minOccurs="0"/>

-

-

-

-

Element non_journal_citation / year

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:gYear

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

minInclusive

1900

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="year">
-  <xs:simpleType>
-    <xs:restriction base="xs:gYear">
-      <xs:minInclusive value="1900"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element non_journal_citation / language

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:language

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="language" type="xs:language" minOccurs="0"/>

-

-

-

-

Element non_journal_citation / external_references

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="PUBMED"/>
-              <xs:enumeration value="DOI"/>
-              <xs:enumeration value="ISBN"/>
-              <xs:enumeration value="ISSN"/>
-              <xs:enumeration value="CAS"/>
-              <xs:whiteSpace value="collapse"/>
-              <xs:enumeration value="CSD"/>
-              <xs:enumeration value="MEDLINE"/>
-              <xs:enumeration value="ASTM"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element non_journal_citation / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element cell_supramolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- cell_supramolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

supramolecule

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , synthetic_source*

-

Children

category, details, external_references, macromolecule_list, name, natural_source, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, synthetic_source

-

Instance

-

-

-

- - - - -

-

<cell_supramolecule supramolecule_id="">
-  <name synonym="">{1,1}</name>
-  <category type="">{0,1}</category>
-  <parent>{1,1}</parent>
-  <macromolecule_list>{0,1}</macromolecule_list>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <external_references type="">{0,unbounded}</external_references>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <natural_source database="" synthetically_produced="">{0,unbounded}</natural_source>
-  <synthetic_source database="" synthetically_produced="">{0,unbounded}</synthetic_source>
-</cell_supramolecule>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cell_supramolecule" substitutionGroup="supramolecule" type="cell_supramolecule_type"/>

-

-

-

-

Element cell_supramolecule_type / natural_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_source_type

Type hierarchy

-

base_source_type
- cell_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1}

-

Children

cell, details, organ, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<natural_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-</natural_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="natural_source" type="cell_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element cell_source_type / organ

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organ" type="xs:token" minOccurs="0"/>

-

-

-

-

Element cell_source_type / tissue

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tissue" type="xs:token" minOccurs="0"/>

-

-

-

-

Element cell_source_type / cell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cell" type="xs:token" minOccurs="0"/>

-

-

-

-

Element cell_supramolecule_type / synthetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_source_type

Type hierarchy

-

base_source_type
- cell_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1}

-

Children

cell, details, organ, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<synthetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-</synthetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_source" type="cell_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element complex_supramolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

complex_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- complex_supramolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

supramolecule

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , synthetic_source* , recombinant_expression* , molecular_weight{0,1} , ribosome-details{0,1}

-

Children

category, details, external_references, macromolecule_list, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, recombinant_expression, ribosome-details, synthetic_source

-

Instance

-

-

-

- - - - -

-

<complex_supramolecule chimera="true" supramolecule_id="">
-  <name synonym="">{1,1}</name>
-  <category type="">{0,1}</category>
-  <parent>{1,1}</parent>
-  <macromolecule_list>{0,1}</macromolecule_list>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <external_references type="">{0,unbounded}</external_references>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <natural_source database="" synthetically_produced="">{0,unbounded}</natural_source>
-  <synthetic_source database="" synthetically_produced="">{0,unbounded}</synthetic_source>
-  <recombinant_expression database="">{0,unbounded}</recombinant_expression>
-  <molecular_weight>{0,1}</molecular_weight>
-  <ribosome-details>{0,1}</ribosome-details>
-</complex_supramolecule>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
chimera	xs:boolean	true	optional	- -
supramolecule_id	xs:positiveInteger		required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="complex_supramolecule" substitutionGroup="supramolecule" type="complex_supramolecule_type"/>

-

-

-

-

Element complex_supramolecule_type / natural_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

complex_source_type

Type hierarchy

-

base_source_type
- complex_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<natural_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</natural_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="natural_source" type="complex_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element complex_source_type / organ

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organ" type="xs:token" minOccurs="0"/>

-

-

-

-

Element complex_source_type / tissue

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tissue" type="xs:token" minOccurs="0"/>

-

-

-

-

Element complex_source_type / cell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cell" type="xs:token" minOccurs="0"/>

-

-

-

-

Element complex_source_type / organelle

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organelle" type="xs:token" minOccurs="0"/>

-

-

-

-

Element complex_source_type / cellular_location

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cellular_location" type="xs:token" minOccurs="0"/>

-

-

-

-

Element complex_supramolecule_type / synthetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

complex_source_type

Type hierarchy

-

base_source_type
- complex_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<synthetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</synthetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_source" type="complex_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element complex_supramolecule_type / recombinant_expression

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

recombinant_source_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

recombinant_organism , recombinant_strain{0,1} , recombinant_cell{0,1} , recombinant_plasmid{0,1} , recombinant_synonym_organism{0,1}

-

Children

recombinant_cell, recombinant_organism, recombinant_plasmid, recombinant_strain, recombinant_synonym_organism

-

Instance

-

-

-

- - - - -

-

<recombinant_expression database="">
-  <recombinant_organism ncbi="">{1,1}</recombinant_organism>
-  <recombinant_strain>{0,1}</recombinant_strain>
-  <recombinant_cell>{0,1}</recombinant_cell>
-  <recombinant_plasmid>{0,1}</recombinant_plasmid>
-  <recombinant_synonym_organism>{0,1}</recombinant_synonym_organism>
-</recombinant_expression>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element recombinant_source_type / recombinant_organism

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

organism_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
ncbi	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_organism" type="organism_type"/>

-

-

-

-

Element recombinant_source_type / recombinant_strain

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_strain" type="xs:token" minOccurs="0"/>

-

-

-

-

Element recombinant_source_type / recombinant_cell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_cell" type="xs:token" minOccurs="0"/>

-

-

-

-

Element recombinant_source_type / recombinant_plasmid

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_plasmid" type="xs:token" minOccurs="0"/>

-

-

-

-

Element recombinant_source_type / recombinant_synonym_organism

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_synonym_organism" type="xs:token" minOccurs="0"/>

-

-

-

-

Element complex_supramolecule_type / molecular_weight

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

molecular_weight_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

experimental{0,1} , theoretical{0,1} , method{0,1}

-

Children

experimental, method, theoretical

-

Instance

-

-

-

- - - - -

-

<molecular_weight>
-  <experimental units="">{0,1}</experimental>
-  <theoretical units="">{0,1}</theoretical>
-  <method>{0,1}</method>
-</molecular_weight>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>

-

-

-

-

Element complex_supramolecule_type / ribosome-details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ribosome-details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element organelle_or_cellular_component_supramolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

organelle_or_cellular_component_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- organelle_or_cellular_component_supramolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

supramolecule

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , synthetic_source* , molecular_weight{0,1} , recombinant_expression{0,1}

-

Children

category, details, external_references, macromolecule_list, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, recombinant_expression, synthetic_source

-

Instance

-

-

-

- - - - -

-

<organelle_or_cellular_component_supramolecule supramolecule_id="">
-  <name synonym="">{1,1}</name>
-  <category type="">{0,1}</category>
-  <parent>{1,1}</parent>
-  <macromolecule_list>{0,1}</macromolecule_list>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <external_references type="">{0,unbounded}</external_references>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <natural_source database="" synthetically_produced="">{0,unbounded}</natural_source>
-  <synthetic_source database="" synthetically_produced="">{0,unbounded}</synthetic_source>
-  <molecular_weight>{0,1}</molecular_weight>
-  <recombinant_expression database="">{0,1}</recombinant_expression>
-</organelle_or_cellular_component_supramolecule>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organelle_or_cellular_component_supramolecule" substitutionGroup="supramolecule" type="organelle_or_cellular_component_supramolecule_type"/>

-

-

-

-

Element organelle_or_cellular_component_supramolecule_type / natural_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

organelle_source_type

Type hierarchy

-

base_source_type
- organelle_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<natural_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</natural_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="natural_source" type="organelle_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element organelle_source_type / organ

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organ" type="xs:token" minOccurs="0"/>

-

-

-

-

Element organelle_source_type / tissue

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tissue" type="xs:token" minOccurs="0"/>

-

-

-

-

Element organelle_source_type / cell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cell" type="xs:token" minOccurs="0"/>

-

-

-

-

Element organelle_source_type / organelle

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organelle" type="xs:token" minOccurs="0"/>

-

-

-

-

Element organelle_source_type / cellular_location

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cellular_location" type="xs:token" minOccurs="0"/>

-

-

-

-

Element organelle_or_cellular_component_supramolecule_type / synthetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

organelle_source_type

Type hierarchy

-

base_source_type
- organelle_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<synthetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</synthetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_source" type="organelle_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element organelle_or_cellular_component_supramolecule_type / molecular_weight

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

molecular_weight_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

experimental{0,1} , theoretical{0,1} , method{0,1}

-

Children

experimental, method, theoretical

-

Instance

-

-

-

- - - - -

-

<molecular_weight>
-  <experimental units="">{0,1}</experimental>
-  <theoretical units="">{0,1}</theoretical>
-  <method>{0,1}</method>
-</molecular_weight>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>

-

-

-

-

Element organelle_or_cellular_component_supramolecule_type / recombinant_expression

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

recombinant_source_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	1

-

-

Model

-

-

recombinant_organism , recombinant_strain{0,1} , recombinant_cell{0,1} , recombinant_plasmid{0,1} , recombinant_synonym_organism{0,1}

-

Children

recombinant_cell, recombinant_organism, recombinant_plasmid, recombinant_strain, recombinant_synonym_organism

-

Instance

-

-

-

- - - - -

-

<recombinant_expression database="">
-  <recombinant_organism ncbi="">{1,1}</recombinant_organism>
-  <recombinant_strain>{0,1}</recombinant_strain>
-  <recombinant_cell>{0,1}</recombinant_cell>
-  <recombinant_plasmid>{0,1}</recombinant_plasmid>
-  <recombinant_synonym_organism>{0,1}</recombinant_synonym_organism>
-</recombinant_expression>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0" maxOccurs="1"/>

-

-

-

-

Element sample_supramolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

sample_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- sample_supramolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

supramolecule

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , synthetic_source* , number_unique_components{0,1} , molecular_weight{0,1}

-

Children

category, details, external_references, macromolecule_list, molecular_weight, name, natural_source, number_of_copies, number_unique_components, oligomeric_state, parent, recombinant_exp_flag, synthetic_source

-

Instance

-

-

-

- - - - -

-

<sample_supramolecule supramolecule_id="">
-  <name synonym="">{1,1}</name>
-  <category type="">{0,1}</category>
-  <parent>{1,1}</parent>
-  <macromolecule_list>{0,1}</macromolecule_list>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <external_references type="">{0,unbounded}</external_references>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <natural_source database="" synthetically_produced="">{0,unbounded}</natural_source>
-  <synthetic_source database="" synthetically_produced="">{0,unbounded}</synthetic_source>
-  <number_unique_components>{0,1}</number_unique_components>
-  <molecular_weight>{0,1}</molecular_weight>
-</sample_supramolecule>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sample_supramolecule" substitutionGroup="supramolecule" type="sample_supramolecule_type"/>

-

-

-

-

Element sample_supramolecule_type / natural_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

sample_source_type

Type hierarchy

-

base_source_type
- sample_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1}

-

Children

cell, details, organ, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<natural_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-</natural_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="natural_source" type="sample_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element sample_source_type / organ

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organ" type="xs:token" minOccurs="0"/>

-

-

-

-

Element sample_source_type / tissue

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tissue" type="xs:token" minOccurs="0"/>

-

-

-

-

Element sample_source_type / cell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cell" type="xs:token" minOccurs="0"/>

-

-

-

-

Element sample_supramolecule_type / synthetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

sample_source_type

Type hierarchy

-

base_source_type
- sample_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1}

-

Children

cell, details, organ, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<synthetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-</synthetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_source" type="sample_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element sample_supramolecule_type / number_unique_components

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_unique_components" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element sample_supramolecule_type / molecular_weight

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

molecular_weight_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

experimental{0,1} , theoretical{0,1} , method{0,1}

-

Children

experimental, method, theoretical

-

Instance

-

-

-

- - - - -

-

<molecular_weight>
-  <experimental units="">{0,1}</experimental>
-  <theoretical units="">{0,1}</theoretical>
-  <method>{0,1}</method>
-</molecular_weight>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>

-

-

-

-

Element tissue_supramolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

tissue_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- tissue_supramolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

supramolecule

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , sythetic_source*

-

Children

category, details, external_references, macromolecule_list, name, natural_source, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, sythetic_source

-

Instance

-

-

-

- - - - -

-

<tissue_supramolecule supramolecule_id="">
-  <name synonym="">{1,1}</name>
-  <category type="">{0,1}</category>
-  <parent>{1,1}</parent>
-  <macromolecule_list>{0,1}</macromolecule_list>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <external_references type="">{0,unbounded}</external_references>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <natural_source database="" synthetically_produced="">{0,unbounded}</natural_source>
-  <sythetic_source database="" synthetically_produced="">{0,unbounded}</sythetic_source>
-</tissue_supramolecule>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tissue_supramolecule" substitutionGroup="supramolecule" type="tissue_supramolecule_type"/>

-

-

-

-

Element tissue_supramolecule_type / natural_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

tissue_source_type

Type hierarchy

-

base_source_type
- tissue_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1}

-

Children

details, organ, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<natural_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-</natural_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="natural_source" type="tissue_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element tissue_source_type / organ

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="organ" type="xs:token" minOccurs="0"/>

-

-

-

-

Element tissue_source_type / tissue

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tissue" type="xs:token" minOccurs="0"/>

-

-

-

-

Element tissue_supramolecule_type / sythetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

tissue_source_type

Type hierarchy

-

base_source_type
- tissue_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1}

-

Children

details, organ, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<sythetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-</sythetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sythetic_source" type="tissue_source_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element virus_supramolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

virus_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- virus_supramolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

supramolecule

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , sci_species_name{0,1} , sci_species_strain{0,1} , natural_host* , synthetic_host* , host_system{0,1} , molecular_weight{0,1} , virus_shell* , virus_type , virus_isolate , virus_enveloped , virus_empty , syn_species_name{0,1} , sci_species_serotype{0,1} , sci_species_serocomplex{0,1} , sci_species_subspecies{0,1}

-

Children

category, details, external_references, host_system, macromolecule_list, molecular_weight, name, natural_host, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, sci_species_name, sci_species_serocomplex, sci_species_serotype, sci_species_strain, sci_species_subspecies, syn_species_name, synthetic_host, virus_empty, virus_enveloped, virus_isolate, virus_shell, virus_type

-

Instance

-

-

-

- - - - -

-

<virus_supramolecule supramolecule_id="">
-  <name synonym="">{1,1}</name>
-  <category type="">{0,1}</category>
-  <parent>{1,1}</parent>
-  <macromolecule_list>{0,1}</macromolecule_list>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <external_references type="">{0,unbounded}</external_references>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <sci_species_name ncbi="">{0,1}</sci_species_name>
-  <sci_species_strain>{0,1}</sci_species_strain>
-  <natural_host database="" synthetically_produced="">{0,unbounded}</natural_host>
-  <synthetic_host database="" synthetically_produced="">{0,unbounded}</synthetic_host>
-  <host_system database="">{0,1}</host_system>
-  <molecular_weight>{0,1}</molecular_weight>
-  <virus_shell shell_id="">{0,unbounded}</virus_shell>
-  <virus_type>{1,1}</virus_type>
-  <virus_isolate>{1,1}</virus_isolate>
-  <virus_enveloped>{1,1}</virus_enveloped>
-  <virus_empty>{1,1}</virus_empty>
-  <syn_species_name>{0,1}</syn_species_name>
-  <sci_species_serotype>{0,1}</sci_species_serotype>
-  <sci_species_serocomplex>{0,1}</sci_species_serocomplex>
-  <sci_species_subspecies>{0,1}</sci_species_subspecies>
-</virus_supramolecule>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="virus_supramolecule" substitutionGroup="supramolecule" type="virus_supramolecule_type"/>

-

-

-

-

Element virus_supramolecule_type / sci_species_name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

virus_species_name_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
ncbi	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sci_species_name" type="virus_species_name_type" minOccurs="0"/>

-

-

-

-

Element virus_supramolecule_type / sci_species_strain

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sci_species_strain" type="xs:string" minOccurs="0" maxOccurs="1"/>

-

-

-

-

Element virus_supramolecule_type / natural_host

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

virus_host_type

Type hierarchy

-

base_source_type
- virus_host_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1}

-

Children

details, organism, strain, synonym_organism

-

Instance

-

-

-

- - - - -

-

<natural_host database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-</natural_host>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="natural_host" type="virus_host_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element virus_supramolecule_type / synthetic_host

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

virus_host_type

Type hierarchy

-

base_source_type
- virus_host_type
-

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1}

-

Children

details, organism, strain, synonym_organism

-

Instance

-

-

-

- - - - -

-

<synthetic_host database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-</synthetic_host>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_host" type="virus_host_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element virus_supramolecule_type / host_system

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

recombinant_source_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

recombinant_organism , recombinant_strain{0,1} , recombinant_cell{0,1} , recombinant_plasmid{0,1} , recombinant_synonym_organism{0,1}

-

Children

recombinant_cell, recombinant_organism, recombinant_plasmid, recombinant_strain, recombinant_synonym_organism

-

Instance

-

-

-

- - - - -

-

<host_system database="">
-  <recombinant_organism ncbi="">{1,1}</recombinant_organism>
-  <recombinant_strain>{0,1}</recombinant_strain>
-  <recombinant_cell>{0,1}</recombinant_cell>
-  <recombinant_plasmid>{0,1}</recombinant_plasmid>
-  <recombinant_synonym_organism>{0,1}</recombinant_synonym_organism>
-</host_system>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="host_system" type="recombinant_source_type" minOccurs="0"/>

-

-

-

-

Element virus_supramolecule_type / molecular_weight

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

molecular_weight_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

experimental{0,1} , theoretical{0,1} , method{0,1}

-

Children

experimental, method, theoretical

-

Instance

-

-

-

- - - - -

-

<molecular_weight>
-  <experimental units="">{0,1}</experimental>
-  <theoretical units="">{0,1}</theoretical>
-  <method>{0,1}</method>
-</molecular_weight>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>

-

-

-

-

Element virus_supramolecule_type / virus_shell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

name{0,1} , diameter{0,1} , triangulation{0,1}

-

Children

diameter, name, triangulation

-

Instance

-

-

-

- - - - -

-

<virus_shell shell_id="">
-  <name>{0,1}</name>
-  <diameter units="Å">{0,1}</diameter>
-  <triangulation>{0,1}</triangulation>
-</virus_shell>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
shell_id	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="virus_shell" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="name" type="xs:token" nillable="false" minOccurs="0"/>
-      <xs:element name="diameter" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_shell_diameter">
-              <xs:attribute name="units" fixed="Å" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="triangulation" type="xs:positiveInteger" minOccurs="0"/>
-    </xs:sequence>
-    <xs:attribute name="shell_id" type="xs:positiveInteger"/>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element virus_supramolecule_type / virus_shell / name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
nillable	false

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="name" type="xs:token" nillable="false" minOccurs="0"/>

-

-

-

-

Element virus_supramolecule_type / virus_shell / diameter

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_shell_diameter

Type hierarchy

-

xs:float
- allowed_shell_diameter
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="diameter" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_shell_diameter">
-        <xs:attribute name="units" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element virus_supramolecule_type / virus_shell / triangulation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="triangulation" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element virus_supramolecule_type / virus_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	PRION	- -
enumeration	SATELLITE	- -
enumeration	VIRION	- -
enumeration	VIROID	- -
enumeration	VIRUS-LIKE PARTICLE	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="virus_type">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PRION"/>
-      <xs:enumeration value="SATELLITE"/>
-      <xs:enumeration value="VIRION"/>
-      <xs:enumeration value="VIROID"/>
-      <xs:enumeration value="VIRUS-LIKE PARTICLE"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element virus_supramolecule_type / virus_isolate

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	OTHER	- -
enumeration	SEROCOMPLEX	- -
enumeration	SEROTYPE	- -
enumeration	SPECIES	- -
enumeration	STRAIN	- -
enumeration	SUBSPECIES	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="virus_isolate">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="OTHER"/>
-      <xs:enumeration value="SEROCOMPLEX"/>
-      <xs:enumeration value="SEROTYPE"/>
-      <xs:enumeration value="SPECIES"/>
-      <xs:enumeration value="STRAIN"/>
-      <xs:enumeration value="SUBSPECIES"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element virus_supramolecule_type / virus_enveloped

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="virus_enveloped" type="xs:boolean"/>

-

-

-

-

Element virus_supramolecule_type / virus_empty

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="virus_empty" type="xs:boolean"/>

-

-

-

-

Element virus_supramolecule_type / syn_species_name

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="syn_species_name" type="xs:string" minOccurs="0" maxOccurs="1"/>

-

-

-

-

Element virus_supramolecule_type / sci_species_serotype

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sci_species_serotype" type="xs:string" minOccurs="0" maxOccurs="1"/>

-

-

-

-

Element virus_supramolecule_type / sci_species_serocomplex

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sci_species_serocomplex" type="xs:string" minOccurs="0" maxOccurs="1"/>

-

-

-

-

Element virus_supramolecule_type / sci_species_subspecies

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	1

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sci_species_subspecies" type="xs:string" minOccurs="0" maxOccurs="1"/>

-

-

-

-

Element dna

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

dna_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- dna_macromolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

macromolecule

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , sequence , classification{0,1} , structure{0,1} , synthetic_flag{0,1} , synthetic_source{0,1}

-

Children

classification, details, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, sequence, structure, synthetic_flag, synthetic_source

-

Instance

-

-

-

- - - - -

-

<dna chimera="" macromolecule_id="" mutant="">
-  <name synonym="">{1,1}</name>
-  <natural_source database="" synthetically_produced="">{0,1}</natural_source>
-  <molecular_weight>{0,1}</molecular_weight>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <sequence>{1,1}</sequence>
-  <classification>{0,1}</classification>
-  <structure>{0,1}</structure>
-  <synthetic_flag>{0,1}</synthetic_flag>
-  <synthetic_source database="" synthetically_produced="">{0,1}</synthetic_source>
-</dna>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="dna" type="dna_macromolecule_type" substitutionGroup="macromolecule"/>

-

-

-

-

Element dna_macromolecule_type / sequence

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

string , discrepancy_list{0,1} , external_references*

-

Children

discrepancy_list, external_references, string

-

Instance

-

-

-

- - - - -

-

<sequence>
-  <string>{1,1}</string>
-  <discrepancy_list>{0,1}</discrepancy_list>
-  <external_references type="">{0,unbounded}</external_references>
-</sequence>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sequence">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="string" type="xs:token"/>
-      <xs:element name="discrepancy_list" minOccurs="0">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="discrepancy" maxOccurs="unbounded">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:pattern value="[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:token">
-              <xs:attribute name="type" use="required">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="REFSEQ"/>
-                    <xs:enumeration value="GENBANK"/>
-                    <xs:whiteSpace value="collapse"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element dna_macromolecule_type / sequence / string

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="string" type="xs:token"/>

-

-

-

-

Element dna_macromolecule_type / sequence / discrepancy_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

discrepancy+

-

Children

discrepancy

-

Instance

-

-

-

- - - - -

-

<discrepancy_list>
-  <discrepancy>{1,unbounded}</discrepancy>
-</discrepancy_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="discrepancy_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="discrepancy" maxOccurs="unbounded">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:pattern value="[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element dna_macromolecule_type / sequence / discrepancy_list / discrepancy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
maxOccurs	unbounded

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="discrepancy" maxOccurs="unbounded">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element dna_macromolecule_type / sequence / external_references

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="REFSEQ"/>
-              <xs:enumeration value="GENBANK"/>
-              <xs:whiteSpace value="collapse"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element dna_macromolecule_type / classification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - -

enumeration

DNA

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="classification" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="DNA"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element dna_macromolecule_type / structure

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="structure" type="xs:token" minOccurs="0"/>

-

-

-

-

Element dna_macromolecule_type / synthetic_flag

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_flag" type="xs:boolean" minOccurs="0"/>

-

-

-

-

Element dna_macromolecule_type / synthetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

macromolecule_source_type

Type hierarchy

-

base_source_type
- macromolecule_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<synthetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</synthetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>

-

-

-

-

Element em_label

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

em_label_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- em_label_macromolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

macromolecule

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , formula{0,1} , synthetic_source{0,1}

-

Children

details, formula, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, synthetic_source

-

Instance

-

-

-

- - - - -

-

<em_label chimera="" macromolecule_id="" mutant="">
-  <name synonym="">{1,1}</name>
-  <natural_source database="" synthetically_produced="">{0,1}</natural_source>
-  <molecular_weight>{0,1}</molecular_weight>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <formula>{0,1}</formula>
-  <synthetic_source database="" synthetically_produced="">{0,1}</synthetic_source>
-</em_label>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="em_label" type="em_label_macromolecule_type" substitutionGroup="macromolecule"/>

-

-

-

-

Element em_label_macromolecule_type / formula

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

formula_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="formula" type="formula_type" minOccurs="0"/>

-

-

-

-

Element em_label_macromolecule_type / synthetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

macromolecule_source_type

Type hierarchy

-

base_source_type
- macromolecule_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<synthetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</synthetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>

-

-

-

-

Element ligand

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

ligand_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- ligand_macromolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

macromolecule

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , formula{0,1} , external_references* , recombinant_expression{0,1}

-

Children

details, external_references, formula, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, recombinant_expression

-

Instance

-

-

-

- - - - -

-

<ligand chimera="" macromolecule_id="" mutant="">
-  <name synonym="">{1,1}</name>
-  <natural_source database="" synthetically_produced="">{0,1}</natural_source>
-  <molecular_weight>{0,1}</molecular_weight>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <formula>{0,1}</formula>
-  <external_references type="">{0,unbounded}</external_references>
-  <recombinant_expression database="">{0,1}</recombinant_expression>
-</ligand>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ligand" type="ligand_macromolecule_type" substitutionGroup="macromolecule"/>

-

-

-

-

Element ligand_macromolecule_type / formula

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

formula_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="formula" type="formula_type" minOccurs="0"/>

-

-

-

-

Element ligand_macromolecule_type / external_references

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:whiteSpace value="collapse"/>
-              <xs:enumeration value="CAS"/>
-              <xs:enumeration value="PUBCHEM"/>
-              <xs:enumeration value="DRUGBANK"/>
-              <xs:enumeration value="CHEBI"/>
-              <xs:enumeration value="CHEMBL"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element ligand_macromolecule_type / recombinant_expression

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

recombinant_source_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

recombinant_organism , recombinant_strain{0,1} , recombinant_cell{0,1} , recombinant_plasmid{0,1} , recombinant_synonym_organism{0,1}

-

Children

recombinant_cell, recombinant_organism, recombinant_plasmid, recombinant_strain, recombinant_synonym_organism

-

Instance

-

-

-

- - - - -

-

<recombinant_expression database="">
-  <recombinant_organism ncbi="">{1,1}</recombinant_organism>
-  <recombinant_strain>{0,1}</recombinant_strain>
-  <recombinant_cell>{0,1}</recombinant_cell>
-  <recombinant_plasmid>{0,1}</recombinant_plasmid>
-  <recombinant_synonym_organism>{0,1}</recombinant_synonym_organism>
-</recombinant_expression>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0"/>

-

-

-

-

Element other_macromolecule

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

other_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- other_macromolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

macromolecule

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , sequence{0,1} , classification , recombinant_expression{0,1} , structure{0,1} , synthetic_flag{0,1} , synthetic_source{0,1}

-

Children

classification, details, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, recombinant_expression, sequence, structure, synthetic_flag, synthetic_source

-

Instance

-

-

-

- - - - -

-

<other_macromolecule chimera="" macromolecule_id="" mutant="">
-  <name synonym="">{1,1}</name>
-  <natural_source database="" synthetically_produced="">{0,1}</natural_source>
-  <molecular_weight>{0,1}</molecular_weight>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <sequence>{0,1}</sequence>
-  <classification>{1,1}</classification>
-  <recombinant_expression database="">{0,1}</recombinant_expression>
-  <structure>{0,1}</structure>
-  <synthetic_flag>{0,1}</synthetic_flag>
-  <synthetic_source database="" synthetically_produced="">{0,1}</synthetic_source>
-</other_macromolecule>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="other_macromolecule" type="other_macromolecule_type" substitutionGroup="macromolecule"/>

-

-

-

-

Element other_macromolecule_type / sequence

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

string , discrepancy_list{0,1} , external_references*

-

Children

discrepancy_list, external_references, string

-

Instance

-

-

-

- - - - -

-

<sequence>
-  <string>{1,1}</string>
-  <discrepancy_list>{0,1}</discrepancy_list>
-  <external_references type="">{0,unbounded}</external_references>
-</sequence>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sequence" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="string">
-        <xs:simpleType>
-          <xs:restriction base="xs:token"/>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="discrepancy_list" minOccurs="0">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="discrepancy" maxOccurs="unbounded">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:pattern value="[AGCTRYSWKMBDHVN\.-]\d+[AGCTRYSWKMBDHVN\.-]"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:token">
-              <xs:attribute name="type" type="xs:token" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element other_macromolecule_type / sequence / string

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="string">
-  <xs:simpleType>
-    <xs:restriction base="xs:token"/>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element other_macromolecule_type / sequence / discrepancy_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

discrepancy+

-

Children

discrepancy

-

Instance

-

-

-

- - - - -

-

<discrepancy_list>
-  <discrepancy>{1,unbounded}</discrepancy>
-</discrepancy_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="discrepancy_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="discrepancy" maxOccurs="unbounded">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:pattern value="[AGCTRYSWKMBDHVN\.-]\d+[AGCTRYSWKMBDHVN\.-]"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element other_macromolecule_type / sequence / discrepancy_list / discrepancy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
maxOccurs	unbounded

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[AGCTRYSWKMBDHVN\.-]\d+[AGCTRYSWKMBDHVN\.-]

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="discrepancy" maxOccurs="unbounded">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="[AGCTRYSWKMBDHVN\.-]\d+[AGCTRYSWKMBDHVN\.-]"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element other_macromolecule_type / sequence / external_references

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type" type="xs:token" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element other_macromolecule_type / classification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="classification" type="xs:token"/>

-

-

-

-

Element other_macromolecule_type / recombinant_expression

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

recombinant_source_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

recombinant_organism , recombinant_strain{0,1} , recombinant_cell{0,1} , recombinant_plasmid{0,1} , recombinant_synonym_organism{0,1}

-

Children

recombinant_cell, recombinant_organism, recombinant_plasmid, recombinant_strain, recombinant_synonym_organism

-

Instance

-

-

-

- - - - -

-

<recombinant_expression database="">
-  <recombinant_organism ncbi="">{1,1}</recombinant_organism>
-  <recombinant_strain>{0,1}</recombinant_strain>
-  <recombinant_cell>{0,1}</recombinant_cell>
-  <recombinant_plasmid>{0,1}</recombinant_plasmid>
-  <recombinant_synonym_organism>{0,1}</recombinant_synonym_organism>
-</recombinant_expression>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0"/>

-

-

-

-

Element other_macromolecule_type / structure

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="structure" type="xs:token" minOccurs="0"/>

-

-

-

-

Element other_macromolecule_type / synthetic_flag

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_flag" type="xs:boolean" minOccurs="0"/>

-

-

-

-

Element other_macromolecule_type / synthetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

macromolecule_source_type

Type hierarchy

-

base_source_type
- macromolecule_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<synthetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</synthetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>

-

-

-

-

Element protein_or_peptide

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

protein_or_peptide_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- protein_or_peptide_macromolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

macromolecule

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , recombinant_expression{0,1} , synthetic_source{0,1} , enantiomer , sequence , ec_number*

-

Children

details, ec_number, enantiomer, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, recombinant_expression, sequence, synthetic_source

-

Instance

-

-

-

- - - - -

-

<protein_or_peptide chimera="" macromolecule_id="" mutant="">
-  <name synonym="">{1,1}</name>
-  <natural_source database="" synthetically_produced="">{0,1}</natural_source>
-  <molecular_weight>{0,1}</molecular_weight>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <recombinant_expression database="">{0,1}</recombinant_expression>
-  <synthetic_source database="" synthetically_produced="">{0,1}</synthetic_source>
-  <enantiomer>{1,1}</enantiomer>
-  <sequence>{1,1}</sequence>
-  <ec_number>{0,unbounded}</ec_number>
-</protein_or_peptide>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="protein_or_peptide" type="protein_or_peptide_macromolecule_type" substitutionGroup="macromolecule"/>

-

-

-

-

Element protein_or_peptide_macromolecule_type / recombinant_expression

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

recombinant_source_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

recombinant_organism , recombinant_strain{0,1} , recombinant_cell{0,1} , recombinant_plasmid{0,1} , recombinant_synonym_organism{0,1}

-

Children

recombinant_cell, recombinant_organism, recombinant_plasmid, recombinant_strain, recombinant_synonym_organism

-

Instance

-

-

-

- - - - -

-

<recombinant_expression database="">
-  <recombinant_organism ncbi="">{1,1}</recombinant_organism>
-  <recombinant_strain>{0,1}</recombinant_strain>
-  <recombinant_cell>{0,1}</recombinant_cell>
-  <recombinant_plasmid>{0,1}</recombinant_plasmid>
-  <recombinant_synonym_organism>{0,1}</recombinant_synonym_organism>
-</recombinant_expression>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0"/>

-

-

-

-

Element protein_or_peptide_macromolecule_type / synthetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

macromolecule_source_type

Type hierarchy

-

base_source_type
- macromolecule_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<synthetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</synthetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>

-

-

-

-

Element protein_or_peptide_macromolecule_type / enantiomer

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	LEVO	- -
enumeration	DEXTRO	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="enantiomer">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="LEVO"/>
-      <xs:enumeration value="DEXTRO"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

string{0,1} , discrepancy_list{0,1} , connectivity{0,1} , external_references*

-

Children

connectivity, discrepancy_list, external_references, string

-

Instance

-

-

-

- - - - -

-

<sequence>
-  <string>{0,1}</string>
-  <discrepancy_list>{0,1}</discrepancy_list>
-  <connectivity>{0,1}</connectivity>
-  <external_references type="">{0,unbounded}</external_references>
-</sequence>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sequence">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="string" type="xs:token" minOccurs="0"/>
-      <xs:element name="discrepancy_list" minOccurs="0">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="discrepancy" maxOccurs="unbounded">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:pattern value="[ARNDCEQGHILKMFPSTWYVUOBZJX]\d+[ARNDCEQGHILKMFPSTWYVUOBZJX]"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="connectivity" minOccurs="0">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element minOccurs="0" name="_n-link">
-              <xs:complexType>
-                <xs:sequence>
-                  <xs:element name="molecule_id"/>
-                </xs:sequence>
-              </xs:complexType>
-            </xs:element>
-            <xs:element minOccurs="0" name="_c-link">
-              <xs:complexType>
-                <xs:sequence>
-                  <xs:element name="molecule_id"/>
-                </xs:sequence>
-              </xs:complexType>
-            </xs:element>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:token">
-              <xs:attribute name="type" use="required">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="UNIPROTKB"/>
-                    <xs:enumeration value="UNIPARC"/>
-                    <xs:enumeration value="INTERPRO"/>
-                    <xs:enumeration value="GO"/>
-                    <xs:enumeration value="GENBANK"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence / string

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="string" type="xs:token" minOccurs="0"/>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence / discrepancy_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

discrepancy+

-

Children

discrepancy

-

Instance

-

-

-

- - - - -

-

<discrepancy_list>
-  <discrepancy>{1,unbounded}</discrepancy>
-</discrepancy_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="discrepancy_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="discrepancy" maxOccurs="unbounded">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:pattern value="[ARNDCEQGHILKMFPSTWYVUOBZJX]\d+[ARNDCEQGHILKMFPSTWYVUOBZJX]"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence / discrepancy_list / discrepancy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
maxOccurs	unbounded

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[ARNDCEQGHILKMFPSTWYVUOBZJX]\d+[ARNDCEQGHILKMFPSTWYVUOBZJX]

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="discrepancy" maxOccurs="unbounded">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="[ARNDCEQGHILKMFPSTWYVUOBZJX]\d+[ARNDCEQGHILKMFPSTWYVUOBZJX]"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence / connectivity

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

_n-link{0,1} , _c-link{0,1}

-

Children

_c-link, _n-link

-

Instance

-

-

-

- - - - -

-

<connectivity>
-  <_n-link>{0,1}</_n-link>
-  <_c-link>{0,1}</_c-link>
-</connectivity>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="connectivity" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element minOccurs="0" name="_n-link">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="molecule_id"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element minOccurs="0" name="_c-link">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="molecule_id"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence / connectivity / _n-link

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

molecule_id

-

Children

molecule_id

-

Instance

-

-

-

- - - - -

-

<_n-link>
-  <molecule_id>{1,1}</molecule_id>
-</_n-link>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="_n-link">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="molecule_id"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence / connectivity / _n-link / molecule_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="molecule_id"/>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence / connectivity / _c-link

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

molecule_id

-

Children

molecule_id

-

Instance

-

-

-

- - - - -

-

<_c-link>
-  <molecule_id>{1,1}</molecule_id>
-</_c-link>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="_c-link">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="molecule_id"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence / connectivity / _c-link / molecule_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="molecule_id"/>

-

-

-

-

Element protein_or_peptide_macromolecule_type / sequence / external_references

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="UNIPROTKB"/>
-              <xs:enumeration value="UNIPARC"/>
-              <xs:enumeration value="INTERPRO"/>
-              <xs:enumeration value="GO"/>
-              <xs:enumeration value="GENBANK"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element protein_or_peptide_macromolecule_type / ec_number

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	unbounded

-

-

-

Facets

-

-

-

- - - - - - -

pattern

([1-7]((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?[0-9]?)|(.-)))(([ ]*,[ - ]*)([1-6]((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?[0-9]?)|(.-))))*

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ec_number" minOccurs="0" maxOccurs="unbounded">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="([1-7]((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?[0-9]?)|(.-)))(([ ]*,[ ]*)([1-6]((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?[0-9]?)|(.-))))*"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element rna

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

rna_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- rna_macromolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

macromolecule

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , sequence , classification{0,1} , structure{0,1} , synthetic_flag{0,1} , synthetic_source{0,1} , ec_number*

-

Children

classification, details, ec_number, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, sequence, structure, synthetic_flag, synthetic_source

-

Instance

-

-

-

- - - - -

-

<rna chimera="" macromolecule_id="" mutant="">
-  <name synonym="">{1,1}</name>
-  <natural_source database="" synthetically_produced="">{0,1}</natural_source>
-  <molecular_weight>{0,1}</molecular_weight>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <sequence>{1,1}</sequence>
-  <classification>{0,1}</classification>
-  <structure>{0,1}</structure>
-  <synthetic_flag>{0,1}</synthetic_flag>
-  <synthetic_source database="" synthetically_produced="">{0,1}</synthetic_source>
-  <ec_number>{0,unbounded}</ec_number>
-</rna>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="rna" type="rna_macromolecule_type" substitutionGroup="macromolecule"/>

-

-

-

-

Element rna_macromolecule_type / sequence

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

string , discrepancy_list{0,1} , external_references*

-

Children

discrepancy_list, external_references, string

-

Instance

-

-

-

- - - - -

-

<sequence>
-  <string>{1,1}</string>
-  <discrepancy_list>{0,1}</discrepancy_list>
-  <external_references type="">{0,unbounded}</external_references>
-</sequence>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sequence">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="string" type="xs:token"/>
-      <xs:element name="discrepancy_list" minOccurs="0">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="discrepancy" maxOccurs="unbounded">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:pattern value="[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:token">
-              <xs:attribute name="type">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="REFSEQ"/>
-                    <xs:enumeration value="GENBANK"/>
-                    <xs:enumeration value="UNIPROTKB"/>
-                    <xs:whiteSpace value="collapse"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element rna_macromolecule_type / sequence / string

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="string" type="xs:token"/>

-

-

-

-

Element rna_macromolecule_type / sequence / discrepancy_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

discrepancy+

-

Children

discrepancy

-

Instance

-

-

-

- - - - -

-

<discrepancy_list>
-  <discrepancy>{1,unbounded}</discrepancy>
-</discrepancy_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="discrepancy_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="discrepancy" maxOccurs="unbounded">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:pattern value="[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element rna_macromolecule_type / sequence / discrepancy_list / discrepancy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
maxOccurs	unbounded

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="discrepancy" maxOccurs="unbounded">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element rna_macromolecule_type / sequence / external_references

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="REFSEQ"/>
-              <xs:enumeration value="GENBANK"/>
-              <xs:enumeration value="UNIPROTKB"/>
-              <xs:whiteSpace value="collapse"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element rna_macromolecule_type / classification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	MESSENGER	- -
enumeration	TRANSFER	- -
enumeration	RIBOSOMAL	- -
enumeration	NON-CODING	- -
enumeration	INTERFERENCE	- -
enumeration	SMALL INTERFERENCE	- -
enumeration	GENOMIC	- -
enumeration	PRE-MESSENGER	- -
enumeration	SMALL NUCLEOLAR	- -
enumeration	TRANSFER-MESSENGER	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="classification" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="MESSENGER"/>
-      <xs:enumeration value="TRANSFER"/>
-      <xs:enumeration value="RIBOSOMAL"/>
-      <xs:enumeration value="NON-CODING"/>
-      <xs:enumeration value="INTERFERENCE"/>
-      <xs:enumeration value="SMALL INTERFERENCE"/>
-      <xs:enumeration value="GENOMIC"/>
-      <xs:enumeration value="PRE-MESSENGER"/>
-      <xs:enumeration value="SMALL NUCLEOLAR"/>
-      <xs:enumeration value="TRANSFER-MESSENGER"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element rna_macromolecule_type / structure

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="structure" type="xs:token" minOccurs="0"/>

-

-

-

-

Element rna_macromolecule_type / synthetic_flag

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_flag" type="xs:boolean" minOccurs="0"/>

-

-

-

-

Element rna_macromolecule_type / synthetic_source

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

macromolecule_source_type

Type hierarchy

-

base_source_type
- macromolecule_source_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Instance

-

-

-

- - - - -

-

<synthetic_source database="" synthetically_produced="">
-  <organism ncbi="">{1,1}</organism>
-  <strain>{0,1}</strain>
-  <synonym_organism>{0,1}</synonym_organism>
-  <details>{0,1}</details>
-  <organ>{0,1}</organ>
-  <tissue>{0,1}</tissue>
-  <cell>{0,1}</cell>
-  <organelle>{0,1}</organelle>
-  <cellular_location>{0,1}</cellular_location>
-</synthetic_source>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>

-

-

-

-

Element rna_macromolecule_type / ec_number

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	simple
minOccurs	0
maxOccurs	unbounded

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d+(\.(\d+|\-)){3}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ec_number" minOccurs="0" maxOccurs="unbounded">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:pattern value="\d+(\.(\d+|\-)){3}"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element saccharide

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

saccharide_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- saccharide_macromolecule_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

macromolecule

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , enantiomer , formula{0,1} , external_references*

-

Children

details, enantiomer, external_references, formula, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag

-

Instance

-

-

-

- - - - -

-

<saccharide chimera="" macromolecule_id="" mutant="">
-  <name synonym="">{1,1}</name>
-  <natural_source database="" synthetically_produced="">{0,1}</natural_source>
-  <molecular_weight>{0,1}</molecular_weight>
-  <details>{0,1}</details>
-  <number_of_copies>{0,1}</number_of_copies>
-  <oligomeric_state>{0,1}</oligomeric_state>
-  <recombinant_exp_flag>{0,1}</recombinant_exp_flag>
-  <enantiomer>{1,1}</enantiomer>
-  <formula>{0,1}</formula>
-  <external_references type="">{0,unbounded}</external_references>
-</saccharide>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="saccharide" type="saccharide_macromolecule_type" substitutionGroup="macromolecule"/>

-

-

-

-

Element saccharide_macromolecule_type / enantiomer

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	LEVO	- -
enumeration	DEXTRO	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="enantiomer">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="LEVO"/>
-      <xs:enumeration value="DEXTRO"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element saccharide_macromolecule_type / formula

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

formula_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="formula" type="formula_type" minOccurs="0"/>

-

-

-

-

Element saccharide_macromolecule_type / external_references

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type	restriction of xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:token">
-        <xs:attribute name="type">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="CARDBANK"/>
-              <xs:whiteSpace value="collapse"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crystallography_preparation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystallography_preparation_type

Type hierarchy

-

base_preparation_type
- crystallography_preparation_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

specimen_preparation

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1} , crystal_formation{0,1}

-

Children

buffer, concentration, crystal_formation, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Instance

-

-

-

- - - - -

-

<crystallography_preparation preparation_id="">
-  <concentration units="">{0,1}</concentration>
-  <buffer>{0,1}</buffer>
-  <staining>{0,1}</staining>
-  <sugar_embedding>{0,1}</sugar_embedding>
-  <shadowing>{0,1}</shadowing>
-  <grid>{0,1}</grid>
-  <vitrification>{0,1}</vitrification>
-  <details>{0,1}</details>
-  <crystal_formation>{0,1}</crystal_formation>
-</crystallography_preparation>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystallography_preparation" type="crystallography_preparation_type" substitutionGroup="specimen_preparation"/>

-

-

-

-

Element crystallography_preparation_type / crystal_formation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

lipid_protein_ratio{0,1} , lipid_mixture{0,1} , instrument{0,1} , atmosphere{0,1} , temperature{0,1} , time{0,1} , details{0,1}

-

Children

atmosphere, details, instrument, lipid_mixture, lipid_protein_ratio, temperature, time

-

Instance

-

-

-

- - - - -

-

<crystal_formation>
-  <lipid_protein_ratio>{0,1}</lipid_protein_ratio>
-  <lipid_mixture>{0,1}</lipid_mixture>
-  <instrument>{0,1}</instrument>
-  <atmosphere>{0,1}</atmosphere>
-  <temperature units="K">{0,1}</temperature>
-  <time units="">{0,1}</time>
-  <details>{0,1}</details>
-</crystal_formation>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystal_formation" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="lipid_protein_ratio" type="xs:float" minOccurs="0"/>
-      <xs:element name="lipid_mixture" type="xs:token" minOccurs="0"/>
-      <xs:element name="instrument" type="xs:token" minOccurs="0"/>
-      <xs:element name="atmosphere" type="xs:token" minOccurs="0"/>
-      <xs:element name="temperature" type="crystal_formation_temperature_type" minOccurs="0"/>
-      <xs:element name="time" type="crystal_formation_time_type" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crystallography_preparation_type / crystal_formation / lipid_protein_ratio

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="lipid_protein_ratio" type="xs:float" minOccurs="0"/>

-

-

-

-

Element crystallography_preparation_type / crystal_formation / lipid_mixture

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="lipid_mixture" type="xs:token" minOccurs="0"/>

-

-

-

-

Element crystallography_preparation_type / crystal_formation / instrument

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="instrument" type="xs:token" minOccurs="0"/>

-

-

-

-

Element crystallography_preparation_type / crystal_formation / atmosphere

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="atmosphere" type="xs:token" minOccurs="0"/>

-

-

-

-

Element crystallography_preparation_type / crystal_formation / temperature

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystal_formation_temperature_type

Type hierarchy

-

xs:float
- allowed_crystal_formation_temperature_type
  - crystal_formation_temperature_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	K	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="temperature" type="crystal_formation_temperature_type" minOccurs="0"/>

-

-

-

-

Element crystallography_preparation_type / crystal_formation / time

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystal_formation_time_type

Type hierarchy

-

xs:float
- non_zero_float
  - crystal_formation_time_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="time" type="crystal_formation_time_type" minOccurs="0"/>

-

-

-

-

Element crystallography_preparation_type / crystal_formation / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element helical_preparation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

helical_preparation_type

Type hierarchy

-

base_preparation_type
- helical_preparation_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

specimen_preparation

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1}

-

Children

buffer, concentration, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Instance

-

-

-

- - - - -

-

<helical_preparation preparation_id="">
-  <concentration units="">{0,1}</concentration>
-  <buffer>{0,1}</buffer>
-  <staining>{0,1}</staining>
-  <sugar_embedding>{0,1}</sugar_embedding>
-  <shadowing>{0,1}</shadowing>
-  <grid>{0,1}</grid>
-  <vitrification>{0,1}</vitrification>
-  <details>{0,1}</details>
-</helical_preparation>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="helical_preparation" type="helical_preparation_type" substitutionGroup="specimen_preparation"/>

-

-

-

-

Element single_particle_preparation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

single_particle_preparation_type

Type hierarchy

-

base_preparation_type
- single_particle_preparation_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

specimen_preparation

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1}

-

Children

buffer, concentration, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Instance

-

-

-

- - - - -

-

<single_particle_preparation preparation_id="">
-  <concentration units="">{0,1}</concentration>
-  <buffer>{0,1}</buffer>
-  <staining>{0,1}</staining>
-  <sugar_embedding>{0,1}</sugar_embedding>
-  <shadowing>{0,1}</shadowing>
-  <grid>{0,1}</grid>
-  <vitrification>{0,1}</vitrification>
-  <details>{0,1}</details>
-</single_particle_preparation>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="single_particle_preparation" type="single_particle_preparation_type" substitutionGroup="specimen_preparation"/>

-

-

-

-

Element subtomogram_averaging_preparation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

subtomogram_averaging_preparation_type

Type hierarchy

-

base_preparation_type
- subtomogram_averaging_preparation_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

specimen_preparation

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1}

-

Children

buffer, concentration, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Instance

-

-

-

- - - - -

-

<subtomogram_averaging_preparation preparation_id="">
-  <concentration units="">{0,1}</concentration>
-  <buffer>{0,1}</buffer>
-  <staining>{0,1}</staining>
-  <sugar_embedding>{0,1}</sugar_embedding>
-  <shadowing>{0,1}</shadowing>
-  <grid>{0,1}</grid>
-  <vitrification>{0,1}</vitrification>
-  <details>{0,1}</details>
-</subtomogram_averaging_preparation>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="subtomogram_averaging_preparation" type="subtomogram_averaging_preparation_type" substitutionGroup="specimen_preparation"/>

-

-

-

-

Element tomography_preparation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

tomography_preparation_type

Type hierarchy

-

base_preparation_type
- tomography_preparation_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

specimen_preparation

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1} , fiducial_markers_list{0,1} , high_pressure_freezing{0,1} , embedding_material{0,1} , cryo_protectant{0,1} , sectioning{0,1}

-

Children

buffer, concentration, cryo_protectant, details, embedding_material, fiducial_markers_list, grid, high_pressure_freezing, sectioning, shadowing, staining, sugar_embedding, vitrification

-

Instance

-

-

-

- - - - -

-

<tomography_preparation preparation_id="">
-  <concentration units="">{0,1}</concentration>
-  <buffer>{0,1}</buffer>
-  <staining>{0,1}</staining>
-  <sugar_embedding>{0,1}</sugar_embedding>
-  <shadowing>{0,1}</shadowing>
-  <grid>{0,1}</grid>
-  <vitrification>{0,1}</vitrification>
-  <details>{0,1}</details>
-  <fiducial_markers_list>{0,1}</fiducial_markers_list>
-  <high_pressure_freezing>{0,1}</high_pressure_freezing>
-  <embedding_material>{0,1}</embedding_material>
-  <cryo_protectant>{0,1}</cryo_protectant>
-  <sectioning>{0,1}</sectioning>
-</tomography_preparation>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tomography_preparation" type="tomography_preparation_type" substitutionGroup="specimen_preparation"/>

-

-

-

-

Element tomography_preparation_type / fiducial_markers_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

fiducial_marker+

-

Children

fiducial_marker

-

Instance

-

-

-

- - - - -

-

<fiducial_markers_list>
-  <fiducial_marker>{1,unbounded}</fiducial_marker>
-</fiducial_markers_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="fiducial_markers_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="fiducial_marker" type="fiducial_marker_type" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element tomography_preparation_type / fiducial_markers_list / fiducial_marker

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

fiducial_marker_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

fiducial_type{0,1} , manufacturer{0,1} , diameter

-

Children

diameter, fiducial_type, manufacturer

-

Instance

-

-

-

- - - - -

-

<fiducial_marker>
-  <fiducial_type>{0,1}</fiducial_type>
-  <manufacturer>{0,1}</manufacturer>
-  <diameter units="nanometer">{1,1}</diameter>
-</fiducial_marker>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="fiducial_marker" type="fiducial_marker_type" maxOccurs="unbounded"/>

-

-

-

-

Element fiducial_marker_type / fiducial_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="fiducial_type" type="xs:token" minOccurs="0"/>

-

-

-

-

Element fiducial_marker_type / manufacturer

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="manufacturer" type="xs:token" minOccurs="0"/>

-

-

-

-

Element fiducial_marker_type / diameter

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

fiducial_marker_diameter_type

Type hierarchy

-

xs:float
- allowed_diameter_colloidal_gold
  - fiducial_marker_diameter_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	nanometer	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="diameter" type="fiducial_marker_diameter_type"/>

-

-

-

-

Element tomography_preparation_type / high_pressure_freezing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

instrument , details{0,1}

-

Children

details, instrument

-

Instance

-

-

-

- - - - -

-

<high_pressure_freezing>
-  <instrument>{1,1}</instrument>
-  <details>{0,1}</details>
-</high_pressure_freezing>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="high_pressure_freezing" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="instrument">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="BAL-TEC HPM 010"/>
-            <xs:enumeration value="EMS-002 RAPID IMMERSION FREEZER"/>
-            <xs:enumeration value="LEICA EM HPM100"/>
-            <xs:enumeration value="LEICA EM PACT"/>
-            <xs:enumeration value="LEICA EM PACT2"/>
-            <xs:enumeration value="OTHER"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element tomography_preparation_type / high_pressure_freezing / instrument

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	BAL-TEC HPM 010	- -
enumeration	EMS-002 RAPID IMMERSION FREEZER	- -
enumeration	LEICA EM HPM100	- -
enumeration	LEICA EM PACT	- -
enumeration	LEICA EM PACT2	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="instrument">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="BAL-TEC HPM 010"/>
-      <xs:enumeration value="EMS-002 RAPID IMMERSION FREEZER"/>
-      <xs:enumeration value="LEICA EM HPM100"/>
-      <xs:enumeration value="LEICA EM PACT"/>
-      <xs:enumeration value="LEICA EM PACT2"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element tomography_preparation_type / high_pressure_freezing / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element tomography_preparation_type / embedding_material

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="embedding_material" type="xs:token" minOccurs="0"/>

-

-

-

-

Element tomography_preparation_type / cryo_protectant

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="cryo_protectant" type="xs:token" minOccurs="0"/>

-

-

-

-

Element tomography_preparation_type / sectioning

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

ultramicrotomy | focused_ion_beam | other_sectioning

-

Children

focused_ion_beam, other_sectioning, ultramicrotomy

-

Instance

-

-

-

- - - - -

-

<sectioning>
-  <ultramicrotomy>{1,1}</ultramicrotomy>
-  <focused_ion_beam>{1,1}</focused_ion_beam>
-  <other_sectioning>{1,1}</other_sectioning>
-</sectioning>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sectioning" minOccurs="0">
-  <xs:complexType>
-    <xs:choice>
-      <xs:element name="ultramicrotomy">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="instrument" type="xs:token"/>
-            <xs:element name="temperature" type="temperature_type"/>
-            <xs:element name="final_thickness" type="ultramicrotomy_final_thickness_type"/>
-            <xs:element name="details" type="xs:string" minOccurs="0"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="focused_ion_beam">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="instrument">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="DB235"/>
-                  <xs:enumeration value="OTHER"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-            <xs:element name="ion">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="GALLIUM+"/>
-                  <xs:enumeration value="OTHER"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:element>
-            <xs:element name="voltage" type="fib_voltage_type"/>
-            <xs:element name="current" type="fib_current_type"/>
-            <xs:element name="dose_rate" type="fib_dose_rate_type" minOccurs="0"/>
-            <xs:element name="duration" type="fib_duration_type"/>
-            <xs:element name="temperature" type="temperature_type"/>
-            <xs:element name="initial_thickness" type="fib_initial_thickness_type"/>
-            <xs:element name="final_thickness" type="fib_final_thickness_type"/>
-            <xs:element name="details" type="xs:string" minOccurs="0"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="other_sectioning" type="xs:string"/>
-    </xs:choice>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element tomography_preparation_type / sectioning / ultramicrotomy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

instrument , temperature , final_thickness , details{0,1}

-

Children

details, final_thickness, instrument, temperature

-

Instance

-

-

-

- - - - -

-

<ultramicrotomy>
-  <instrument>{1,1}</instrument>
-  <temperature units="K">{1,1}</temperature>
-  <final_thickness units="nm">{1,1}</final_thickness>
-  <details>{0,1}</details>
-</ultramicrotomy>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ultramicrotomy">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="instrument" type="xs:token"/>
-      <xs:element name="temperature" type="temperature_type"/>
-      <xs:element name="final_thickness" type="ultramicrotomy_final_thickness_type"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element tomography_preparation_type / sectioning / ultramicrotomy / instrument

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="instrument" type="xs:token"/>

-

-

-

-

Element tomography_preparation_type / sectioning / ultramicrotomy / temperature

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

temperature_type

Type hierarchy

-

xs:float
- allowed_temperature
  - temperature_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	K	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="temperature" type="temperature_type"/>

-

-

-

-

Element tomography_preparation_type / sectioning / ultramicrotomy / final_thickness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

ultramicrotomy_final_thickness_type

Type hierarchy

-

xs:float
- allowed_microtome_thickness
  - ultramicrotomy_final_thickness_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
units	xs:token	nm	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_thickness" type="ultramicrotomy_final_thickness_type"/>

-

-

-

-

Element tomography_preparation_type / sectioning / ultramicrotomy / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

instrument , ion , voltage , current , dose_rate{0,1} , duration , temperature , initial_thickness , final_thickness , details{0,1}

-

Children

current, details, dose_rate, duration, final_thickness, initial_thickness, instrument, ion, temperature, voltage

-

Instance

-

-

-

- - - - -

-

<focused_ion_beam>
-  <instrument>{1,1}</instrument>
-  <ion>{1,1}</ion>
-  <voltage units="kV">{1,1}</voltage>
-  <current units="nA">{1,1}</current>
-  <dose_rate units="ions/(cm^2*s)">{0,1}</dose_rate>
-  <duration units="s">{1,1}</duration>
-  <temperature units="K">{1,1}</temperature>
-  <initial_thickness units="nm">{1,1}</initial_thickness>
-  <final_thickness units="nm">{1,1}</final_thickness>
-  <details>{0,1}</details>
-</focused_ion_beam>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="focused_ion_beam">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="instrument">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="DB235"/>
-            <xs:enumeration value="OTHER"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="ion">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="GALLIUM+"/>
-            <xs:enumeration value="OTHER"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="voltage" type="fib_voltage_type"/>
-      <xs:element name="current" type="fib_current_type"/>
-      <xs:element name="dose_rate" type="fib_dose_rate_type" minOccurs="0"/>
-      <xs:element name="duration" type="fib_duration_type"/>
-      <xs:element name="temperature" type="temperature_type"/>
-      <xs:element name="initial_thickness" type="fib_initial_thickness_type"/>
-      <xs:element name="final_thickness" type="fib_final_thickness_type"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / instrument

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	DB235	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="instrument">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="DB235"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / ion

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	GALLIUM+	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ion">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="GALLIUM+"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / voltage

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

fib_voltage_type

Type hierarchy

-

xs:float
- allowed_focus_ion_voltage
  - fib_voltage_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		kV	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="voltage" type="fib_voltage_type"/>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / current

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

fib_current_type

Type hierarchy

-

xs:float
- allowed_focus_ion_current
  - fib_current_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		nA	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="current" type="fib_current_type"/>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / dose_rate

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

fib_dose_rate_type

Type hierarchy

-

xs:float
- allowed_focus_ion_dose_rate
  - fib_dose_rate_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
units	xs:token	ions/(cm^2*s)	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="dose_rate" type="fib_dose_rate_type" minOccurs="0"/>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / duration

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

fib_duration_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	s	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="duration" type="fib_duration_type"/>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / temperature

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

temperature_type

Type hierarchy

-

xs:float
- allowed_temperature
  - temperature_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	K	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="temperature" type="temperature_type"/>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / initial_thickness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

fib_initial_thickness_type

Type hierarchy

-

xs:float
- allowed_focus_ion_initial_thickness
  - fib_initial_thickness_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
units	xs:token	nm	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="initial_thickness" type="fib_initial_thickness_type"/>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / final_thickness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

fib_final_thickness_type

Type hierarchy

-

xs:float
- allowed_focus_ion_final_thickness
  - fib_final_thickness_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
units	xs:token	nm	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_thickness" type="fib_final_thickness_type"/>

-

-

-

-

Element tomography_preparation_type / sectioning / focused_ion_beam / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element tomography_preparation_type / sectioning / other_sectioning

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="other_sectioning" type="xs:string"/>

-

-

-

-

Element crystallography_microscopy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystallography_microscopy_type

Type hierarchy

-

base_microscopy_type
- crystallography_microscopy_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

microscopy

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1} , camera_length , (tilt_list{0,1} | tilt_series*)

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, camera_length, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min, tilt_list, tilt_series

-

Instance

-

-

-

- - - - -

-

<crystallography_microscopy microscopy_id="">
-  <specimen_preparations>{0,1}</specimen_preparations>
-  <microscope>{1,1}</microscope>
-  <illumination_mode>{1,1}</illumination_mode>
-  <imaging_mode>{1,1}</imaging_mode>
-  <electron_source>{1,1}</electron_source>
-  <acceleration_voltage units="kV">{1,1}</acceleration_voltage>
-  <c2_aperture_diameter units="µm">{0,1}</c2_aperture_diameter>
-  <nominal_cs units="mm">{0,1}</nominal_cs>
-  <nominal_defocus_min units="µm">{0,1}</nominal_defocus_min>
-  <calibrated_defocus_min units="µm">{0,1}</calibrated_defocus_min>
-  <nominal_defocus_max units="µm">{0,1}</nominal_defocus_max>
-  <calibrated_defocus_max units="µm">{0,1}</calibrated_defocus_max>
-  <nominal_magnification>{0,1}</nominal_magnification>
-  <calibrated_magnification>{0,1}</calibrated_magnification>
-  <specimen_holder_model>{0,1}</specimen_holder_model>
-  <cooling_holder_cryogen>{0,1}</cooling_holder_cryogen>
-  <temperature>{0,1}</temperature>
-  <alignment_procedure>{0,1}</alignment_procedure>
-  <specialist_optics>{0,1}</specialist_optics>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <date>{0,1}</date>
-  <image_recording_list>{1,1}</image_recording_list>
-  <specimen_holder>{0,1}</specimen_holder>
-  <tilt_angle_min>{0,1}</tilt_angle_min>
-  <tilt_angle_max>{0,1}</tilt_angle_max>
-  <camera_length units="mm">{1,1}</camera_length>
-  <tilt_list>{0,1}</tilt_list>
-  <tilt_series>{0,unbounded}</tilt_series>
-</crystallography_microscopy>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystallography_microscopy" type="crystallography_microscopy_type" substitutionGroup="microscopy"/>

-

-

-

-

Element crystallography_microscopy_type / camera_length

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_camera_length

Type hierarchy

-

xs:float
- allowed_camera_length
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	mm	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="camera_length">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_camera_length">
-        <xs:attribute name="units" type="xs:token" fixed="mm" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crystallography_microscopy_type / tilt_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

angle+

-

Children

angle

-

Instance

-

-

-

- - - - -

-

<tilt_list>
-  <angle>{1,unbounded}</angle>
-</tilt_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tilt_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="angle" maxOccurs="unbounded">
-        <xs:simpleType>
-          <xs:restriction base="xs:float">
-            <xs:minInclusive value="-70"/>
-            <xs:maxInclusive value="70"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crystallography_microscopy_type / tilt_list / angle

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
maxOccurs	unbounded

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	70	- -
minInclusive	-70	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="angle" maxOccurs="unbounded">
-  <xs:simpleType>
-    <xs:restriction base="xs:float">
-      <xs:minInclusive value="-70"/>
-      <xs:maxInclusive value="70"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element crystallography_microscopy_type / tilt_series

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

tilt_series_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

axis1 , axis2{0,1} , axis_rotation{0,1}

-

Children

axis1, axis2, axis_rotation

-

Instance

-

-

-

- - - - -

-

<tilt_series>
-  <axis1>{1,1}</axis1>
-  <axis2>{0,1}</axis2>
-  <axis_rotation units="deg">{0,1}</axis_rotation>
-</tilt_series>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tilt_series" type="tilt_series_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element tilt_series_type / axis1

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

axis_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

min_angle{0,1} , max_angle{0,1} , angle_increment{0,1}

-

Children

angle_increment, max_angle, min_angle

-

Instance

-

-

-

- - - - -

-

<axis1>
-  <min_angle units="deg">{0,1}</min_angle>
-  <max_angle units="deg">{0,1}</max_angle>
-  <angle_increment units="deg">{0,1}</angle_increment>
-</axis1>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="axis1" type="axis_type"/>

-

-

-

-

Element axis_type / min_angle

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_angle_tomography

Type hierarchy

-

xs:float
- allowed_angle_tomography
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="min_angle" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_angle_tomography">
-        <xs:attribute name="units" fixed="deg" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element axis_type / max_angle

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_angle_tomography

Type hierarchy

-

xs:float
- allowed_angle_tomography
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="max_angle" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_angle_tomography">
-        <xs:attribute name="units" fixed="deg" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element axis_type / angle_increment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_angle_increment

Type hierarchy

-

xs:float
- allowed_angle_increment
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="angle_increment" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_angle_increment">
-        <xs:attribute name="units" fixed="deg" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element tilt_series_type / axis2

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of axis_type

Type hierarchy

-

axis_type

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

min_angle{0,1} , max_angle{0,1} , angle_increment{0,1} , axis_rotation{0,1}

-

Children

angle_increment, axis_rotation, max_angle, min_angle

-

Instance

-

-

-

- - - - -

-

<axis2>
-  <min_angle units="deg">{0,1}</min_angle>
-  <max_angle units="deg">{0,1}</max_angle>
-  <angle_increment units="deg">{0,1}</angle_increment>
-  <axis_rotation>{0,1}</axis_rotation>
-</axis2>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="axis2" minOccurs="0">
-  <xs:complexType>
-    <xs:complexContent>
-      <xs:extension base="axis_type">
-        <xs:sequence>
-          <xs:element name="axis_rotation" type="xs:float" minOccurs="0"/>
-        </xs:sequence>
-      </xs:extension>
-    </xs:complexContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element tilt_series_type / axis2 / axis_rotation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="axis_rotation" type="xs:float" minOccurs="0"/>

-

-

-

-

Element tilt_series_type / axis_rotation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:float

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
fixed	90

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="axis_rotation" fixed="90" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:float">
-        <xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element helical_microscopy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

helical_microscopy_type

Type hierarchy

-

base_microscopy_type
- helical_microscopy_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

microscopy

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1}

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min

-

Instance

-

-

-

- - - - -

-

<helical_microscopy microscopy_id="">
-  <specimen_preparations>{0,1}</specimen_preparations>
-  <microscope>{1,1}</microscope>
-  <illumination_mode>{1,1}</illumination_mode>
-  <imaging_mode>{1,1}</imaging_mode>
-  <electron_source>{1,1}</electron_source>
-  <acceleration_voltage units="kV">{1,1}</acceleration_voltage>
-  <c2_aperture_diameter units="µm">{0,1}</c2_aperture_diameter>
-  <nominal_cs units="mm">{0,1}</nominal_cs>
-  <nominal_defocus_min units="µm">{0,1}</nominal_defocus_min>
-  <calibrated_defocus_min units="µm">{0,1}</calibrated_defocus_min>
-  <nominal_defocus_max units="µm">{0,1}</nominal_defocus_max>
-  <calibrated_defocus_max units="µm">{0,1}</calibrated_defocus_max>
-  <nominal_magnification>{0,1}</nominal_magnification>
-  <calibrated_magnification>{0,1}</calibrated_magnification>
-  <specimen_holder_model>{0,1}</specimen_holder_model>
-  <cooling_holder_cryogen>{0,1}</cooling_holder_cryogen>
-  <temperature>{0,1}</temperature>
-  <alignment_procedure>{0,1}</alignment_procedure>
-  <specialist_optics>{0,1}</specialist_optics>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <date>{0,1}</date>
-  <image_recording_list>{1,1}</image_recording_list>
-  <specimen_holder>{0,1}</specimen_holder>
-  <tilt_angle_min>{0,1}</tilt_angle_min>
-  <tilt_angle_max>{0,1}</tilt_angle_max>
-</helical_microscopy>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="helical_microscopy" type="helical_microscopy_type" substitutionGroup="microscopy"/>

-

-

-

-

Element single_particle_microscopy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

single_particle_microscopy_type

Type hierarchy

-

base_microscopy_type
- single_particle_microscopy_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

microscopy

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1}

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min

-

Instance

-

-

-

- - - - -

-

<single_particle_microscopy microscopy_id="">
-  <specimen_preparations>{0,1}</specimen_preparations>
-  <microscope>{1,1}</microscope>
-  <illumination_mode>{1,1}</illumination_mode>
-  <imaging_mode>{1,1}</imaging_mode>
-  <electron_source>{1,1}</electron_source>
-  <acceleration_voltage units="kV">{1,1}</acceleration_voltage>
-  <c2_aperture_diameter units="µm">{0,1}</c2_aperture_diameter>
-  <nominal_cs units="mm">{0,1}</nominal_cs>
-  <nominal_defocus_min units="µm">{0,1}</nominal_defocus_min>
-  <calibrated_defocus_min units="µm">{0,1}</calibrated_defocus_min>
-  <nominal_defocus_max units="µm">{0,1}</nominal_defocus_max>
-  <calibrated_defocus_max units="µm">{0,1}</calibrated_defocus_max>
-  <nominal_magnification>{0,1}</nominal_magnification>
-  <calibrated_magnification>{0,1}</calibrated_magnification>
-  <specimen_holder_model>{0,1}</specimen_holder_model>
-  <cooling_holder_cryogen>{0,1}</cooling_holder_cryogen>
-  <temperature>{0,1}</temperature>
-  <alignment_procedure>{0,1}</alignment_procedure>
-  <specialist_optics>{0,1}</specialist_optics>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <date>{0,1}</date>
-  <image_recording_list>{1,1}</image_recording_list>
-  <specimen_holder>{0,1}</specimen_holder>
-  <tilt_angle_min>{0,1}</tilt_angle_min>
-  <tilt_angle_max>{0,1}</tilt_angle_max>
-</single_particle_microscopy>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="single_particle_microscopy" type="single_particle_microscopy_type" substitutionGroup="microscopy"/>

-

-

-

-

Element subtomogram_averaging_microscopy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

tomography_microscopy_type

Type hierarchy

-

base_microscopy_type
- tomography_microscopy_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

microscopy

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1} , tilt_series*

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min, tilt_series

-

Instance

-

-

-

- - - - -

-

<subtomogram_averaging_microscopy microscopy_id="">
-  <specimen_preparations>{0,1}</specimen_preparations>
-  <microscope>{1,1}</microscope>
-  <illumination_mode>{1,1}</illumination_mode>
-  <imaging_mode>{1,1}</imaging_mode>
-  <electron_source>{1,1}</electron_source>
-  <acceleration_voltage units="kV">{1,1}</acceleration_voltage>
-  <c2_aperture_diameter units="µm">{0,1}</c2_aperture_diameter>
-  <nominal_cs units="mm">{0,1}</nominal_cs>
-  <nominal_defocus_min units="µm">{0,1}</nominal_defocus_min>
-  <calibrated_defocus_min units="µm">{0,1}</calibrated_defocus_min>
-  <nominal_defocus_max units="µm">{0,1}</nominal_defocus_max>
-  <calibrated_defocus_max units="µm">{0,1}</calibrated_defocus_max>
-  <nominal_magnification>{0,1}</nominal_magnification>
-  <calibrated_magnification>{0,1}</calibrated_magnification>
-  <specimen_holder_model>{0,1}</specimen_holder_model>
-  <cooling_holder_cryogen>{0,1}</cooling_holder_cryogen>
-  <temperature>{0,1}</temperature>
-  <alignment_procedure>{0,1}</alignment_procedure>
-  <specialist_optics>{0,1}</specialist_optics>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <date>{0,1}</date>
-  <image_recording_list>{1,1}</image_recording_list>
-  <specimen_holder>{0,1}</specimen_holder>
-  <tilt_angle_min>{0,1}</tilt_angle_min>
-  <tilt_angle_max>{0,1}</tilt_angle_max>
-  <tilt_series>{0,unbounded}</tilt_series>
-</subtomogram_averaging_microscopy>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="subtomogram_averaging_microscopy" type="tomography_microscopy_type" substitutionGroup="microscopy"/>

-

-

-

-

Element tomography_microscopy_type / tilt_series

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

tilt_series_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

axis1 , axis2{0,1} , axis_rotation{0,1}

-

Children

axis1, axis2, axis_rotation

-

Instance

-

-

-

- - - - -

-

<tilt_series>
-  <axis1>{1,1}</axis1>
-  <axis2>{0,1}</axis2>
-  <axis_rotation units="deg">{0,1}</axis_rotation>
-</tilt_series>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tilt_series" type="tilt_series_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element tomography_microscopy

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

tomography_microscopy_type

Type hierarchy

-

base_microscopy_type
- tomography_microscopy_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

microscopy

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1} , tilt_series*

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min, tilt_series

-

Instance

-

-

-

- - - - -

-

<tomography_microscopy microscopy_id="">
-  <specimen_preparations>{0,1}</specimen_preparations>
-  <microscope>{1,1}</microscope>
-  <illumination_mode>{1,1}</illumination_mode>
-  <imaging_mode>{1,1}</imaging_mode>
-  <electron_source>{1,1}</electron_source>
-  <acceleration_voltage units="kV">{1,1}</acceleration_voltage>
-  <c2_aperture_diameter units="µm">{0,1}</c2_aperture_diameter>
-  <nominal_cs units="mm">{0,1}</nominal_cs>
-  <nominal_defocus_min units="µm">{0,1}</nominal_defocus_min>
-  <calibrated_defocus_min units="µm">{0,1}</calibrated_defocus_min>
-  <nominal_defocus_max units="µm">{0,1}</nominal_defocus_max>
-  <calibrated_defocus_max units="µm">{0,1}</calibrated_defocus_max>
-  <nominal_magnification>{0,1}</nominal_magnification>
-  <calibrated_magnification>{0,1}</calibrated_magnification>
-  <specimen_holder_model>{0,1}</specimen_holder_model>
-  <cooling_holder_cryogen>{0,1}</cooling_holder_cryogen>
-  <temperature>{0,1}</temperature>
-  <alignment_procedure>{0,1}</alignment_procedure>
-  <specialist_optics>{0,1}</specialist_optics>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <date>{0,1}</date>
-  <image_recording_list>{1,1}</image_recording_list>
-  <specimen_holder>{0,1}</specimen_holder>
-  <tilt_angle_min>{0,1}</tilt_angle_min>
-  <tilt_angle_max>{0,1}</tilt_angle_max>
-  <tilt_series>{0,unbounded}</tilt_series>
-</tomography_microscopy>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tomography_microscopy" type="tomography_microscopy_type" substitutionGroup="microscopy"/>

-

-

-

-

Element crystallography_processing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystallography_processing_type

Type hierarchy

-

base_image_processing_type
- crystallography_processing_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

image_processing

-

Model

-

-

image_recording_id , details{0,1} , final_reconstruction{0,1} , crystal_parameters{0,1} , startup_model* , ctf_correction{0,1} , molecular_replacement{0,1} , lattice_distortion_correction_software_list{0,1} , symmetry_determination_software_list{0,1} , merging_software_list{0,1} , crystallography_statistics{0,1}

-

Children

crystal_parameters, crystallography_statistics, ctf_correction, details, final_reconstruction, image_recording_id, lattice_distortion_correction_software_list, merging_software_list, molecular_replacement, startup_model, symmetry_determination_software_list

-

Instance

-

-

-

- - - - -

-

<crystallography_processing image_processing_id="">
-  <image_recording_id>{1,1}</image_recording_id>
-  <details>{0,1}</details>
-  <final_reconstruction>{0,1}</final_reconstruction>
-  <crystal_parameters>{0,1}</crystal_parameters>
-  <startup_model type_of_model="">{0,unbounded}</startup_model>
-  <ctf_correction>{0,1}</ctf_correction>
-  <molecular_replacement>{0,1}</molecular_replacement>
-  <lattice_distortion_correction_software_list>{0,1}</lattice_distortion_correction_software_list>
-  <symmetry_determination_software_list>{0,1}</symmetry_determination_software_list>
-  <merging_software_list>{0,1}</merging_software_list>
-  <crystallography_statistics>{0,1}</crystallography_statistics>
-</crystallography_processing>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystallography_processing" substitutionGroup="image_processing" type="crystallography_processing_type"/>

-

-

-

-

Element crystallography_proc_add_group / final_reconstruction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

non_subtom_final_reconstruction_type

Type hierarchy

-

final_reconstruction_type
- non_subtom_final_reconstruction_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_classes_used{0,1} , applied_symmetry{0,1} , algorithm{0,1} , resolution{0,1} , resolution_method{0,1} , reconstruction_filtering{0,1} , software_list{0,1} , details{0,1} , number_images_used{0,1}

-

Children

algorithm, applied_symmetry, details, number_classes_used, number_images_used, reconstruction_filtering, resolution, resolution_method, software_list

-

Instance

-

-

-

- - - - -

-

<final_reconstruction>
-  <number_classes_used>{0,1}</number_classes_used>
-  <applied_symmetry>{0,1}</applied_symmetry>
-  <algorithm>{0,1}</algorithm>
-  <resolution res_type="" units="Å">{0,1}</resolution>
-  <resolution_method>{0,1}</resolution_method>
-  <reconstruction_filtering>{0,1}</reconstruction_filtering>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <number_images_used>{0,1}</number_images_used>
-</final_reconstruction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_reconstruction" type="non_subtom_final_reconstruction_type" minOccurs="0"/>

-

-

-

-

Element final_reconstruction_type / number_classes_used

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_classes_used" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element final_reconstruction_type / applied_symmetry

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

applied_symmetry_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

space_group | point_group | helical_parameters

-

Children

helical_parameters, point_group, space_group

-

Instance

-

-

-

- - - - -

-

<applied_symmetry>
-  <space_group>{1,1}</space_group>
-  <point_group>{1,1}</point_group>
-  <helical_parameters>{1,1}</helical_parameters>
-</applied_symmetry>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="applied_symmetry" type="applied_symmetry_type" minOccurs="0"/>

-

-

-

-

Element final_reconstruction_type / algorithm

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

reconstruction_algorithm_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	ALGEBRAIC (ARTS)	- -
enumeration	BACK PROJECTION	- -
enumeration	EXACT BACK PROJECTION	- -
enumeration	FOURIER SPACE	- -
enumeration	SIMULTANEOUS ITERATIVE (SIRT)	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="algorithm" type="reconstruction_algorithm_type" minOccurs="0"/>

-

-

-

-

Element final_reconstruction_type / resolution

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of resolution_type

Type hierarchy

-

xs:float
- resolution_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
res_type	restriction of xs:token		required	- -
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="resolution" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="resolution_type">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-        <xs:attribute name="res_type" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="BY AUTHOR"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element final_reconstruction_type / resolution_method

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	DIFFRACTION PATTERN/LAYERLINES	- -
enumeration	FSC 0.143 CUT-OFF	- -
enumeration	FSC 0.33 CUT-OFF	- -
enumeration	FSC 0.5 CUT-OFF	- -
enumeration	FSC 1/2 BIT CUT-OFF	- -
enumeration	FSC 3 SIGMA CUT-OFF	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="resolution_method" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="DIFFRACTION PATTERN/LAYERLINES"/>
-      <xs:enumeration value="FSC 0.143 CUT-OFF"/>
-      <xs:enumeration value="FSC 0.33 CUT-OFF"/>
-      <xs:enumeration value="FSC 0.5 CUT-OFF"/>
-      <xs:enumeration value="FSC 1/2 BIT CUT-OFF"/>
-      <xs:enumeration value="FSC 3 SIGMA CUT-OFF"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element final_reconstruction_type / reconstruction_filtering

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

reconstruction_filtering_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

background_masked{0,1} , spatial_filtering{0,1} , sharpening{0,1} , b-factorSharpening{0,1} , other{0,1}

-

Children

b-factorSharpening, background_masked, other, sharpening, spatial_filtering

-

Instance

-

-

-

- - - - -

-

<reconstruction_filtering>
-  <background_masked>{0,1}</background_masked>
-  <spatial_filtering>{0,1}</spatial_filtering>
-  <sharpening>{0,1}</sharpening>
-  <b-factorSharpening>{0,1}</b-factorSharpening>
-  <other>{0,1}</other>
-</reconstruction_filtering>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="reconstruction_filtering" type="reconstruction_filtering_type" minOccurs="0"/>

-

-

-

-

Element reconstruction_filtering_type / background_masked

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

background_masked_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

geometrical_shape , dimensions{0,1} , software_list{0,1} , details{0,1}

-

Children

details, dimensions, geometrical_shape, software_list

-

Instance

-

-

-

- - - - -

-

<background_masked>
-  <geometrical_shape>{1,1}</geometrical_shape>
-  <dimensions>{0,1}</dimensions>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</background_masked>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="background_masked" type="background_masked_type" minOccurs="0"/>

-

-

-

-

Element background_masked_type / geometrical_shape

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	SPHERE	- -
enumeration	SOFT SPHERE	- -
enumeration	GAUSSIAN	- -
enumeration	CIRCLE	- -
enumeration	RECTANGLE	- -
enumeration	CYLINDER	- -
enumeration	OTHER	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="geometrical_shape">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="SPHERE"/>
-      <xs:enumeration value="SOFT SPHERE"/>
-      <xs:enumeration value="GAUSSIAN"/>
-      <xs:enumeration value="CIRCLE"/>
-      <xs:enumeration value="RECTANGLE"/>
-      <xs:enumeration value="CYLINDER"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element background_masked_type / dimensions

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

radius{0,1} , width , height , depth

-

Children

depth, height, radius, width

-

Instance

-

-

-

- - - - -

-

<dimensions>
-  <radius units="">{0,1}</radius>
-  <width units="">{1,1}</width>
-  <height units="">{1,1}</height>
-  <depth units="">{1,1}</depth>
-</dimensions>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="dimensions">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element minOccurs="0" name="radius">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:float">
-              <xs:attribute name="units" use="required">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="PIXEL"/>
-                    <xs:enumeration value="Å"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="width">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:float">
-              <xs:attribute name="units" use="required">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="PIXEL"/>
-                    <xs:enumeration value="Å"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="height">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:float">
-              <xs:attribute name="units" use="required">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="PIXEL"/>
-                    <xs:enumeration value="Å"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="depth">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:float">
-              <xs:attribute name="units" use="required">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="PIXEL"/>
-                    <xs:enumeration value="Å"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:attribute>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element background_masked_type / dimensions / radius

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element minOccurs="0" name="radius">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:float">
-        <xs:attribute name="units" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="PIXEL"/>
-              <xs:enumeration value="Å"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element background_masked_type / dimensions / width

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:float

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="width">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:float">
-        <xs:attribute name="units" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="PIXEL"/>
-              <xs:enumeration value="Å"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element background_masked_type / dimensions / height

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:float

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="height">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:float">
-        <xs:attribute name="units" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="PIXEL"/>
-              <xs:enumeration value="Å"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element background_masked_type / dimensions / depth

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:float

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="depth">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:float">
-        <xs:attribute name="units" use="required">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="PIXEL"/>
-              <xs:enumeration value="Å"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:attribute>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element background_masked_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element background_masked_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element reconstruction_filtering_type / spatial_filtering

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

low_frequency_cutoff , high_frequency_cutoff , filter_function , software_list{0,1} , details{0,1}

-

Children

details, filter_function, high_frequency_cutoff, low_frequency_cutoff, software_list

-

Instance

-

-

-

- - - - -

-

<spatial_filtering>
-  <low_frequency_cutoff units="1/Å">{1,1}</low_frequency_cutoff>
-  <high_frequency_cutoff units="1/Å">{1,1}</high_frequency_cutoff>
-  <filter_function>{1,1}</filter_function>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</spatial_filtering>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="spatial_filtering" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="low_frequency_cutoff">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:float">
-              <xs:attribute name="units" fixed="1/Å" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="high_frequency_cutoff">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="xs:float">
-              <xs:attribute name="units" fixed="1/Å" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="filter_function" type="xs:token"/>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element reconstruction_filtering_type / spatial_filtering / low_frequency_cutoff

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:float

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		1/Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="low_frequency_cutoff">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:float">
-        <xs:attribute name="units" fixed="1/Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element reconstruction_filtering_type / spatial_filtering / high_frequency_cutoff

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:float

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		1/Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="high_frequency_cutoff">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="xs:float">
-        <xs:attribute name="units" fixed="1/Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element reconstruction_filtering_type / spatial_filtering / filter_function

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="filter_function" type="xs:token"/>

-

-

-

-

Element reconstruction_filtering_type / spatial_filtering / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element reconstruction_filtering_type / spatial_filtering / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element reconstruction_filtering_type / sharpening

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software_list{0,1} , details{0,1}

-

Children

details, software_list

-

Instance

-

-

-

- - - - -

-

<sharpening>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</sharpening>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="sharpening" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element reconstruction_filtering_type / sharpening / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element reconstruction_filtering_type / sharpening / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element reconstruction_filtering_type / b-factorSharpening

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

_brestore , software_list{0,1} , details{0,1}

-

Children

_brestore, details, software_list

-

Instance

-

-

-

- - - - -

-

<b-factorSharpening>
-  <_brestore units="Å^2">{1,1}</_brestore>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</b-factorSharpening>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="b-factorSharpening" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="_brestore">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_brestore_type">
-              <xs:attribute name="units" type="xs:token" fixed="Å^2" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element reconstruction_filtering_type / b-factorSharpening / _brestore

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_brestore_type

Type hierarchy

-

xs:float
- allowed_brestore_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å^2	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="_brestore">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_brestore_type">
-        <xs:attribute name="units" type="xs:token" fixed="Å^2" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element reconstruction_filtering_type / b-factorSharpening / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element reconstruction_filtering_type / b-factorSharpening / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element reconstruction_filtering_type / other

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software_list{0,1} , details{0,1}

-

Children

details, software_list

-

Instance

-

-

-

- - - - -

-

<other>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</other>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="other" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element reconstruction_filtering_type / other / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element reconstruction_filtering_type / other / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element final_reconstruction_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element final_reconstruction_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element non_subtom_final_reconstruction_type / number_images_used

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_images_used" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element crystallography_proc_add_group / crystal_parameters

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystal_parameters_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

unit_cell , (plane_group | space_group)

-

Children

plane_group, space_group, unit_cell

-

Instance

-

-

-

- - - - -

-

<crystal_parameters>
-  <unit_cell>{1,1}</unit_cell>
-  <plane_group>{1,1}</plane_group>
-  <space_group>{1,1}</space_group>
-</crystal_parameters>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystal_parameters" type="crystal_parameters_type" minOccurs="0"/>

-

-

-

-

Element crystal_parameters_type / unit_cell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

unit_cell_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

a , b , c , c_sampling_length{0,1} , gamma , alpha{0,1} , beta{0,1}

-

Children

a, alpha, b, beta, c, c_sampling_length, gamma

-

Instance

-

-

-

- - - - -

-

<unit_cell>
-  <a units="Å">{1,1}</a>
-  <b units="Å">{1,1}</b>
-  <c units="Å">{1,1}</c>
-  <c_sampling_length units="Å">{0,1}</c_sampling_length>
-  <gamma units="deg">{1,1}</gamma>
-  <alpha units="deg">{0,1}</alpha>
-  <beta units="deg">{0,1}</beta>
-</unit_cell>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="unit_cell" type="unit_cell_type"/>

-

-

-

-

Element unit_cell_type / a

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_type

Type hierarchy

-

xs:float
- allowed_cell_dim
  - cell_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="a" type="cell_type"/>

-

-

-

-

Element unit_cell_type / b

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_type

Type hierarchy

-

xs:float
- allowed_cell_dim
  - cell_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="b" type="cell_type"/>

-

-

-

-

Element unit_cell_type / c

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_type

Type hierarchy

-

xs:float
- allowed_cell_dim
  - cell_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="c" type="cell_type"/>

-

-

-

-

Element unit_cell_type / c_sampling_length

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_type

Type hierarchy

-

xs:float
- allowed_cell_dim
  - cell_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="c_sampling_length" type="cell_type" minOccurs="0"/>

-

-

-

-

Element unit_cell_type / gamma

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_angle_type

Type hierarchy

-

xs:float
- allowed_cell_angle
  - cell_angle_type
  -
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="gamma" type="cell_angle_type"/>

-

-

-

-

Element unit_cell_type / alpha

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_angle_type

Type hierarchy

-

xs:float
- allowed_cell_angle
  - cell_angle_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="alpha" type="cell_angle_type" minOccurs="0"/>

-

-

-

-

Element unit_cell_type / beta

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

cell_angle_type

Type hierarchy

-

xs:float
- allowed_cell_angle
  - cell_angle_type
  -
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="beta" type="cell_angle_type" minOccurs="0"/>

-

-

-

-

Element crystal_parameters_type / plane_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	C 1 2	- -
enumeration	C 2 2 2	- -
enumeration	P 1	- -
enumeration	P 1 2	- -
enumeration	P 1 21	- -
enumeration	P 2	- -
enumeration	P 2 2 2	- -
enumeration	P 2 2 21	- -
enumeration	P 2 21 21	- -
enumeration	P 3	- -
enumeration	P 3 1 2	- -
enumeration	P 3 2 1	- -
enumeration	P 4	- -
enumeration	P 4 2 2	- -
enumeration	P 4 21 2	- -
enumeration	P 6	- -
enumeration	P 6 2 2	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="plane_group">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="C 1 2"/>
-      <xs:enumeration value="C 2 2 2"/>
-      <xs:enumeration value="P 1"/>
-      <xs:enumeration value="P 1 2"/>
-      <xs:enumeration value="P 1 21"/>
-      <xs:enumeration value="P 2"/>
-      <xs:enumeration value="P 2 2 2"/>
-      <xs:enumeration value="P 2 2 21"/>
-      <xs:enumeration value="P 2 21 21"/>
-      <xs:enumeration value="P 3"/>
-      <xs:enumeration value="P 3 1 2"/>
-      <xs:enumeration value="P 3 2 1"/>
-      <xs:enumeration value="P 4"/>
-      <xs:enumeration value="P 4 2 2"/>
-      <xs:enumeration value="P 4 21 2"/>
-      <xs:enumeration value="P 6"/>
-      <xs:enumeration value="P 6 2 2"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element crystal_parameters_type / space_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="space_group" type="xs:token"/>

-

-

-

-

Element crystallography_proc_add_group / startup_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

starting_map_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

(random_conical_tilt{0,1} | orthogonal_tilt{0,1} | emdb_id{0,1} | pdb_model{0,1} | insilico_model{0,1} | other{0,1}) , details{0,1}

-

Children

details, emdb_id, insilico_model, orthogonal_tilt, other, pdb_model, random_conical_tilt

-

Instance

-

-

-

- - - - -

-

<startup_model type_of_model="">
-  <random_conical_tilt>{0,1}</random_conical_tilt>
-  <orthogonal_tilt>{0,1}</orthogonal_tilt>
-  <emdb_id>{0,1}</emdb_id>
-  <pdb_model>{0,1}</pdb_model>
-  <insilico_model>{0,1}</insilico_model>
-  <other>{0,1}</other>
-  <details>{0,1}</details>
-</startup_model>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type_of_model	xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="startup_model" type="starting_map_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element starting_map_type / random_conical_tilt

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_images{0,1} , tilt_angle{0,1} , software_list{0,1} , details{0,1}

-

Children

details, number_images, software_list, tilt_angle

-

Instance

-

-

-

- - - - -

-

<random_conical_tilt>
-  <number_images>{0,1}</number_images>
-  <tilt_angle units="degrees">{0,1}</tilt_angle>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</random_conical_tilt>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="random_conical_tilt" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="number_images" type="xs:positiveInteger" minOccurs="0"/>
-      <xs:element name="tilt_angle" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_tilt_angle_random_conical">
-              <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element starting_map_type / random_conical_tilt / number_images

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_images" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element starting_map_type / random_conical_tilt / tilt_angle

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_tilt_angle_random_conical

Type hierarchy

-

xs:float
- allowed_tilt_angle_random_conical
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	degrees	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tilt_angle" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_tilt_angle_random_conical">
-        <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element starting_map_type / random_conical_tilt / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element starting_map_type / random_conical_tilt / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element starting_map_type / orthogonal_tilt

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software_list{0,1} , number_images{0,1} , tilt_angle1{0,1} , tilt_angle2{0,1} , details{0,1}

-

Children

details, number_images, software_list, tilt_angle1, tilt_angle2

-

Instance

-

-

-

- - - - -

-

<orthogonal_tilt>
-  <software_list>{0,1}</software_list>
-  <number_images>{0,1}</number_images>
-  <tilt_angle1 units="degrees">{0,1}</tilt_angle1>
-  <tilt_angle2 units="degrees">{0,1}</tilt_angle2>
-  <details>{0,1}</details>
-</orthogonal_tilt>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="orthogonal_tilt" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-      <xs:element name="number_images" type="xs:positiveInteger" minOccurs="0"/>
-      <xs:element name="tilt_angle1" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_tilt_angle1Orthogonal">
-              <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="tilt_angle2" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_tilt_angle2Orthogonal">
-              <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element starting_map_type / orthogonal_tilt / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element starting_map_type / orthogonal_tilt / number_images

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_images" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element starting_map_type / orthogonal_tilt / tilt_angle1

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_tilt_angle1Orthogonal

Type hierarchy

-

xs:float
- allowed_tilt_angle1Orthogonal
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	degrees	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tilt_angle1" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_tilt_angle1Orthogonal">
-        <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element starting_map_type / orthogonal_tilt / tilt_angle2

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_tilt_angle2Orthogonal

Type hierarchy

-

xs:float
- allowed_tilt_angle2Orthogonal
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	degrees	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tilt_angle2" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_tilt_angle2Orthogonal">
-        <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element starting_map_type / orthogonal_tilt / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element starting_map_type / emdb_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

emdb_id_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - -

pattern

EMD-\d{4,}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="emdb_id" type="emdb_id_type" minOccurs="0"/>

-

-

-

-

Element starting_map_type / pdb_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pdb_model_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

pdb_id{0,1} , chain_id_list{0,1}

-

Children

chain_id_list, pdb_id

-

Instance

-

-

-

- - - - -

-

<pdb_model>
-  <pdb_id>{0,1}</pdb_id>
-  <chain_id_list>{0,1}</chain_id_list>
-</pdb_model>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="pdb_model" type="pdb_model_type" minOccurs="0"/>

-

-

-

-

Element pdb_model_type / pdb_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pdb_code_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d[\dA-Za-z]{3}|pdb_\d{5}[\dA-Za-z]{3}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="pdb_id" type="pdb_code_type" minOccurs="0"/>

-

-

-

-

Element pdb_model_type / chain_id_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

chain_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

chain_id* , residue_range{0,1}

-

Children

chain_id, residue_range

-

Instance

-

-

-

- - - - -

-

<chain_id_list>
-  <chain_id>{0,unbounded}</chain_id>
-  <residue_range>{0,1}</residue_range>
-</chain_id_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="chain_id_list" type="chain_type" minOccurs="0"/>

-

-

-

-

Element starting_map_type / insilico_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="insilico_model" type="xs:token" minOccurs="0"/>

-

-

-

-

Element starting_map_type / other

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="other" type="xs:string" minOccurs="0"/>

-

-

-

-

Element starting_map_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element crystallography_proc_add_group / ctf_correction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

ctf_correction_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

phase_reversal{0,1} , amplitude_correction{0,1} , correction_operation{0,1} , software_list{0,1} , details{0,1}

-

Children

amplitude_correction, correction_operation, details, phase_reversal, software_list

-

Instance

-

-

-

- - - - -

-

<ctf_correction>
-  <phase_reversal>{0,1}</phase_reversal>
-  <amplitude_correction>{0,1}</amplitude_correction>
-  <correction_operation>{0,1}</correction_operation>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</ctf_correction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>

-

-

-

-

Element ctf_correction_type / phase_reversal

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

anisotropic{0,1} , correction_space{0,1}

-

Children

anisotropic, correction_space

-

Instance

-

-

-

- - - - -

-

<phase_reversal>
-  <anisotropic>{0,1}</anisotropic>
-  <correction_space>{0,1}</correction_space>
-</phase_reversal>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="phase_reversal" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="anisotropic" type="xs:boolean" minOccurs="0"/>
-      <xs:element name="correction_space" type="correction_space_type" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element ctf_correction_type / phase_reversal / anisotropic

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="anisotropic" type="xs:boolean" minOccurs="0"/>

-

-

-

-

Element ctf_correction_type / phase_reversal / correction_space

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

correction_space_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	REAL	- -
enumeration	RECIPROCAL	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="correction_space" type="correction_space_type" minOccurs="0"/>

-

-

-

-

Element ctf_correction_type / amplitude_correction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

factor{0,1} , correction_space{0,1}

-

Children

correction_space, factor

-

Instance

-

-

-

- - - - -

-

<amplitude_correction>
-  <factor>{0,1}</factor>
-  <correction_space>{0,1}</correction_space>
-</amplitude_correction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="amplitude_correction" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="factor" type="xs:float" minOccurs="0"/>
-      <xs:element name="correction_space" type="correction_space_type" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element ctf_correction_type / amplitude_correction / factor

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="factor" type="xs:float" minOccurs="0"/>

-

-

-

-

Element ctf_correction_type / amplitude_correction / correction_space

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

correction_space_type

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	REAL	- -
enumeration	RECIPROCAL	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="correction_space" type="correction_space_type" minOccurs="0"/>

-

-

-

-

Element ctf_correction_type / correction_operation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	MULTIPLICATION	- -
enumeration	DIVISION	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="correction_operation" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:string">
-      <xs:enumeration value="MULTIPLICATION"/>
-      <xs:enumeration value="DIVISION"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element ctf_correction_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element ctf_correction_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element crystallography_proc_add_group / molecular_replacement

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

molecular_replacement_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

starting_model* , resolution_range{0,1} , software_list{0,1}

-

Children

resolution_range, software_list, starting_model

-

Instance

-

-

-

- - - - -

-

<molecular_replacement>
-  <starting_model>{0,unbounded}</starting_model>
-  <resolution_range>{0,1}</resolution_range>
-  <software_list>{0,1}</software_list>
-</molecular_replacement>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="molecular_replacement" type="molecular_replacement_type" minOccurs="0"/>

-

-

-

-

Element molecular_replacement_type / starting_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

access_code , chain*

-

Children

access_code, chain

-

Instance

-

-

-

- - - - -

-

<starting_model>
-  <access_code>{1,1}</access_code>
-  <chain>{0,unbounded}</chain>
-</starting_model>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="starting_model" minOccurs="0" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="access_code" type="pdb_code_type"/>
-      <xs:element name="chain" type="chain_type" minOccurs="0" maxOccurs="unbounded"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element molecular_replacement_type / starting_model / access_code

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

pdb_code_type

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

\d[\dA-Za-z]{3}|pdb_\d{5}[\dA-Za-z]{3}

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="access_code" type="pdb_code_type"/>

-

-

-

-

Element molecular_replacement_type / starting_model / chain

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

chain_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

chain_id* , residue_range{0,1}

-

Children

chain_id, residue_range

-

Instance

-

-

-

- - - - -

-

<chain>
-  <chain_id>{0,unbounded}</chain_id>
-  <residue_range>{0,1}</residue_range>
-</chain>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="chain" type="chain_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element molecular_replacement_type / resolution_range

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

high_resolution , low_resolution

-

Children

high_resolution, low_resolution

-

Instance

-

-

-

- - - - -

-

<resolution_range>
-  <high_resolution units="Å">{1,1}</high_resolution>
-  <low_resolution units="Å">{1,1}</low_resolution>
-</resolution_range>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="resolution_range" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="high_resolution">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="resolution_type">
-              <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="low_resolution">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="resolution_type">
-              <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element molecular_replacement_type / resolution_range / high_resolution

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of resolution_type

Type hierarchy

-

xs:float
- resolution_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="high_resolution">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="resolution_type">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element molecular_replacement_type / resolution_range / low_resolution

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of resolution_type

Type hierarchy

-

xs:float
- resolution_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="low_resolution">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="resolution_type">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element molecular_replacement_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element crystallography_proc_add_group / lattice_distortion_correction_software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<lattice_distortion_correction_software_list>
-  <software>{0,unbounded}</software>
-</lattice_distortion_correction_software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="lattice_distortion_correction_software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element crystallography_proc_add_group / symmetry_determination_software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<symmetry_determination_software_list>
-  <software>{0,unbounded}</software>
-</symmetry_determination_software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="symmetry_determination_software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element crystallography_proc_add_group / merging_software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<merging_software_list>
-  <software>{0,unbounded}</software>
-</merging_software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="merging_software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element crystallography_proc_add_group / crystallography_statistics

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystallography_statistics_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_intensities_measured , number_structure_factors , fourier_space_coverage , r_sym{0,1} , r_merge , overall_phase_error{0,1} , overall_phase_residual{0,1} , phase_error_rejection_criteria , high_resolution , shell_list{0,1} , details{0,1}

-

Children

details, fourier_space_coverage, high_resolution, number_intensities_measured, number_structure_factors, overall_phase_error, overall_phase_residual, phase_error_rejection_criteria, r_merge, r_sym, shell_list

-

Instance

-

-

-

- - - - -

-

<crystallography_statistics>
-  <number_intensities_measured>{1,1}</number_intensities_measured>
-  <number_structure_factors>{1,1}</number_structure_factors>
-  <fourier_space_coverage>{1,1}</fourier_space_coverage>
-  <r_sym>{0,1}</r_sym>
-  <r_merge>{1,1}</r_merge>
-  <overall_phase_error>{0,1}</overall_phase_error>
-  <overall_phase_residual>{0,1}</overall_phase_residual>
-  <phase_error_rejection_criteria>{1,1}</phase_error_rejection_criteria>
-  <high_resolution units="Å">{1,1}</high_resolution>
-  <shell_list>{0,1}</shell_list>
-  <details>{0,1}</details>
-</crystallography_statistics>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystallography_statistics" type="crystallography_statistics_type" minOccurs="0"/>

-

-

-

-

Element crystallography_statistics_type / number_intensities_measured

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_intensities_measured" type="xs:positiveInteger"/>

-

-

-

-

Element crystallography_statistics_type / number_structure_factors

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_structure_factors" type="xs:positiveInteger"/>

-

-

-

-

Element crystallography_statistics_type / fourier_space_coverage

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="fourier_space_coverage" type="xs:float"/>

-

-

-

-

Element crystallography_statistics_type / r_sym

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="r_sym" type="xs:float" minOccurs="0"/>

-

-

-

-

Element crystallography_statistics_type / r_merge

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="r_merge" type="xs:float"/>

-

-

-

-

Element crystallography_statistics_type / overall_phase_error

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="overall_phase_error" type="xs:token" minOccurs="0"/>

-

-

-

-

Element crystallography_statistics_type / overall_phase_residual

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="overall_phase_residual" type="xs:float" minOccurs="0"/>

-

-

-

-

Element crystallography_statistics_type / phase_error_rejection_criteria

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="phase_error_rejection_criteria" type="xs:token"/>

-

-

-

-

Element crystallography_statistics_type / high_resolution

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of resolution_type

Type hierarchy

-

xs:float
- resolution_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="high_resolution">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="resolution_type">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crystallography_statistics_type / shell_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

shell+

-

Children

shell

-

Instance

-

-

-

- - - - -

-

<shell_list>
-  <shell shell_id="">{1,unbounded}</shell>
-</shell_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="shell_list" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="shell" maxOccurs="unbounded">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="high_resolution">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="resolution_type">
-                    <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="low_resolution">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="resolution_type">
-                    <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="number_structure_factors" type="xs:positiveInteger"/>
-            <xs:element name="phase_residual" type="xs:float"/>
-            <xs:element name="fourier_space_coverage" type="xs:float"/>
-            <xs:element name="multiplicity" type="xs:float"/>
-          </xs:sequence>
-          <xs:attribute name="shell_id" type="xs:positiveInteger"/>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crystallography_statistics_type / shell_list / shell

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

high_resolution , low_resolution , number_structure_factors , phase_residual , fourier_space_coverage , multiplicity

-

Children

fourier_space_coverage, high_resolution, low_resolution, multiplicity, number_structure_factors, phase_residual

-

Instance

-

-

-

- - - - -

-

<shell shell_id="">
-  <high_resolution units="Å">{1,1}</high_resolution>
-  <low_resolution units="Å">{1,1}</low_resolution>
-  <number_structure_factors>{1,1}</number_structure_factors>
-  <phase_residual>{1,1}</phase_residual>
-  <fourier_space_coverage>{1,1}</fourier_space_coverage>
-  <multiplicity>{1,1}</multiplicity>
-</shell>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
shell_id	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="shell" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="high_resolution">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="resolution_type">
-              <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="low_resolution">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="resolution_type">
-              <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="number_structure_factors" type="xs:positiveInteger"/>
-      <xs:element name="phase_residual" type="xs:float"/>
-      <xs:element name="fourier_space_coverage" type="xs:float"/>
-      <xs:element name="multiplicity" type="xs:float"/>
-    </xs:sequence>
-    <xs:attribute name="shell_id" type="xs:positiveInteger"/>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crystallography_statistics_type / shell_list / shell / high_resolution

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of resolution_type

Type hierarchy

-

xs:float
- resolution_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="high_resolution">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="resolution_type">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crystallography_statistics_type / shell_list / shell / low_resolution

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of resolution_type

Type hierarchy

-

xs:float
- resolution_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="low_resolution">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="resolution_type">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element crystallography_statistics_type / shell_list / shell / number_structure_factors

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_structure_factors" type="xs:positiveInteger"/>

-

-

-

-

Element crystallography_statistics_type / shell_list / shell / phase_residual

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="phase_residual" type="xs:float"/>

-

-

-

-

Element crystallography_statistics_type / shell_list / shell / fourier_space_coverage

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="fourier_space_coverage" type="xs:float"/>

-

-

-

-

Element crystallography_statistics_type / shell_list / shell / multiplicity

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="multiplicity" type="xs:float"/>

-

-

-

-

Element crystallography_statistics_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element helical_processing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

helical_processing_type

Type hierarchy

-

base_image_processing_type
- helical_processing_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

image_processing

-

Model

-

-

image_recording_id , details{0,1} , final_reconstruction{0,1} , ctf_correction{0,1} , segment_selection* , refinement{0,1} , startup_model* , helical_layer_lines{0,1} , initial_angle_assignment{0,1} , final_angle_assignment{0,1} , crystal_parameters{0,1}

-

Children

crystal_parameters, ctf_correction, details, final_angle_assignment, final_reconstruction, helical_layer_lines, image_recording_id, initial_angle_assignment, refinement, segment_selection, startup_model

-

Instance

-

-

-

- - - - -

-

<helical_processing image_processing_id="">
-  <image_recording_id>{1,1}</image_recording_id>
-  <details>{0,1}</details>
-  <final_reconstruction>{0,1}</final_reconstruction>
-  <ctf_correction>{0,1}</ctf_correction>
-  <segment_selection>{0,unbounded}</segment_selection>
-  <refinement>{0,1}</refinement>
-  <startup_model type_of_model="">{0,unbounded}</startup_model>
-  <helical_layer_lines>{0,1}</helical_layer_lines>
-  <initial_angle_assignment>{0,1}</initial_angle_assignment>
-  <final_angle_assignment>{0,1}</final_angle_assignment>
-  <crystal_parameters>{0,1}</crystal_parameters>
-</helical_processing>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="helical_processing" substitutionGroup="image_processing" type="helical_processing_type"/>

-

-

-

-

Element helical_processing_add_group / final_reconstruction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

non_subtom_final_reconstruction_type

Type hierarchy

-

final_reconstruction_type
- non_subtom_final_reconstruction_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_classes_used{0,1} , applied_symmetry{0,1} , algorithm{0,1} , resolution{0,1} , resolution_method{0,1} , reconstruction_filtering{0,1} , software_list{0,1} , details{0,1} , number_images_used{0,1}

-

Children

algorithm, applied_symmetry, details, number_classes_used, number_images_used, reconstruction_filtering, resolution, resolution_method, software_list

-

Instance

-

-

-

- - - - -

-

<final_reconstruction>
-  <number_classes_used>{0,1}</number_classes_used>
-  <applied_symmetry>{0,1}</applied_symmetry>
-  <algorithm>{0,1}</algorithm>
-  <resolution res_type="" units="Å">{0,1}</resolution>
-  <resolution_method>{0,1}</resolution_method>
-  <reconstruction_filtering>{0,1}</reconstruction_filtering>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <number_images_used>{0,1}</number_images_used>
-</final_reconstruction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_reconstruction" type="non_subtom_final_reconstruction_type" minOccurs="0"/>

-

-

-

-

Element helical_processing_add_group / ctf_correction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

ctf_correction_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

phase_reversal{0,1} , amplitude_correction{0,1} , correction_operation{0,1} , software_list{0,1} , details{0,1}

-

Children

amplitude_correction, correction_operation, details, phase_reversal, software_list

-

Instance

-

-

-

- - - - -

-

<ctf_correction>
-  <phase_reversal>{0,1}</phase_reversal>
-  <amplitude_correction>{0,1}</amplitude_correction>
-  <correction_operation>{0,1}</correction_operation>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</ctf_correction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>

-

-

-

-

Element helical_processing_add_group / segment_selection

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

segment_selection_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

number_selected{0,1} , segment_length{0,1} , segment_overlap{0,1} , total_filament_length{0,1} , software_list{0,1} , details{0,1}

-

Children

details, number_selected, segment_length, segment_overlap, software_list, total_filament_length

-

Instance

-

-

-

- - - - -

-

<segment_selection>
-  <number_selected>{0,1}</number_selected>
-  <segment_length units="Å">{0,1}</segment_length>
-  <segment_overlap units="Å">{0,1}</segment_overlap>
-  <total_filament_length units="Å">{0,1}</total_filament_length>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</segment_selection>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="segment_selection" type="segment_selection_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element segment_selection_type / number_selected

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_selected" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element segment_selection_type / segment_length

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of non_zero_float

Type hierarchy

-

xs:float
- non_zero_float
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="segment_length" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="non_zero_float">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element segment_selection_type / segment_overlap

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of non_zero_float

Type hierarchy

-

xs:float
- non_zero_float
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="segment_overlap" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="non_zero_float">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element segment_selection_type / total_filament_length

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of non_zero_float

Type hierarchy

-

xs:float
- non_zero_float
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="total_filament_length" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="non_zero_float">
-        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element segment_selection_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element segment_selection_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element helical_processing_add_group / refinement

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

refinement_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

startup_model* , starting_symmetry+ , software_list{0,1} , details{0,1}

-

Children

details, software_list, starting_symmetry, startup_model

-

Instance

-

-

-

- - - - -

-

<refinement>
-  <startup_model type_of_model="">{0,unbounded}</startup_model>
-  <starting_symmetry>{1,unbounded}</starting_symmetry>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</refinement>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="refinement" type="refinement_type" minOccurs="0"/>

-

-

-

-

Element refinement_type / startup_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

starting_map_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

(random_conical_tilt{0,1} | orthogonal_tilt{0,1} | emdb_id{0,1} | pdb_model{0,1} | insilico_model{0,1} | other{0,1}) , details{0,1}

-

Children

details, emdb_id, insilico_model, orthogonal_tilt, other, pdb_model, random_conical_tilt

-

Instance

-

-

-

- - - - -

-

<startup_model type_of_model="">
-  <random_conical_tilt>{0,1}</random_conical_tilt>
-  <orthogonal_tilt>{0,1}</orthogonal_tilt>
-  <emdb_id>{0,1}</emdb_id>
-  <pdb_model>{0,1}</pdb_model>
-  <insilico_model>{0,1}</insilico_model>
-  <other>{0,1}</other>
-  <details>{0,1}</details>
-</startup_model>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type_of_model	xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="startup_model" type="starting_map_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element refinement_type / starting_symmetry

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
maxOccurs	unbounded

-

-

Model

-

-

helical_parameters

-

Children

helical_parameters

-

Instance

-

-

-

- - - - -

-

<starting_symmetry>
-  <helical_parameters>{1,1}</helical_parameters>
-</starting_symmetry>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="starting_symmetry" maxOccurs="unbounded">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="helical_parameters" type="helical_parameters_type"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element refinement_type / starting_symmetry / helical_parameters

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

helical_parameters_type

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

delta_z , delta_phi , axial_symmetry

-

Children

axial_symmetry, delta_phi, delta_z

-

Instance

-

-

-

- - - - -

-

<helical_parameters>
-  <delta_z units="Å">{1,1}</delta_z>
-  <delta_phi units="deg">{1,1}</delta_phi>
-  <axial_symmetry>{1,1}</axial_symmetry>
-</helical_parameters>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="helical_parameters" type="helical_parameters_type"/>

-

-

-

-

Element refinement_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element refinement_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element helical_processing_add_group / startup_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

starting_map_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

(random_conical_tilt{0,1} | orthogonal_tilt{0,1} | emdb_id{0,1} | pdb_model{0,1} | insilico_model{0,1} | other{0,1}) , details{0,1}

-

Children

details, emdb_id, insilico_model, orthogonal_tilt, other, pdb_model, random_conical_tilt

-

Instance

-

-

-

- - - - -

-

<startup_model type_of_model="">
-  <random_conical_tilt>{0,1}</random_conical_tilt>
-  <orthogonal_tilt>{0,1}</orthogonal_tilt>
-  <emdb_id>{0,1}</emdb_id>
-  <pdb_model>{0,1}</pdb_model>
-  <insilico_model>{0,1}</insilico_model>
-  <other>{0,1}</other>
-  <details>{0,1}</details>
-</startup_model>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type_of_model	xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="startup_model" type="starting_map_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element helical_processing_add_group / helical_layer_lines

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

layer_lines_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_helices , helix_length , straightening{0,1} , indexing

-

Children

helix_length, indexing, number_helices, straightening

-

Instance

-

-

-

- - - - -

-

<helical_layer_lines>
-  <number_helices>{1,1}</number_helices>
-  <helix_length>{1,1}</helix_length>
-  <straightening>{0,1}</straightening>
-  <indexing>{1,1}</indexing>
-</helical_layer_lines>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="helical_layer_lines" type="layer_lines_type" minOccurs="0"/>

-

-

-

-

Element layer_lines_type / number_helices

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_helices"/>

-

-

-

-

Element layer_lines_type / helix_length

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

min , max , average , software_list{0,1}

-

Children

average, max, min, software_list

-

Instance

-

-

-

- - - - -

-

<helix_length>
-  <min>{1,1}</min>
-  <max>{1,1}</max>
-  <average>{1,1}</average>
-  <software_list>{0,1}</software_list>
-</helix_length>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="helix_length">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="min"/>
-      <xs:element name="max"/>
-      <xs:element name="average"/>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element layer_lines_type / helix_length / min

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="min"/>

-

-

-

-

Element layer_lines_type / helix_length / max

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="max"/>

-

-

-

-

Element layer_lines_type / helix_length / average

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="average"/>

-

-

-

-

Element layer_lines_type / helix_length / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element layer_lines_type / straightening

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:boolean

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="straightening" type="xs:boolean" minOccurs="0"/>

-

-

-

-

Element layer_lines_type / indexing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

software_list{0,1}

-

Children

software_list

-

Instance

-

-

-

- - - - -

-

<indexing>
-  <software_list>{0,1}</software_list>
-</indexing>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="indexing">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element layer_lines_type / indexing / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element helical_processing_add_group / initial_angle_assignment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

angle_assignment_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

type , projection_matching_processing{0,1} , software_list{0,1} , details{0,1}

-

Children

details, projection_matching_processing, software_list, type

-

Instance

-

-

-

- - - - -

-

<initial_angle_assignment>
-  <type>{1,1}</type>
-  <projection_matching_processing>{0,1}</projection_matching_processing>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</initial_angle_assignment>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="initial_angle_assignment" type="angle_assignment_type" minOccurs="0"/>

-

-

-

-

Element angle_assignment_type / type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	ANGULAR RECONSTITUTION	- -
enumeration	COMMON LINE	- -
enumeration	NOT APPLICABLE	- -
enumeration	OTHER	- -
enumeration	PROJECTION MATCHING	- -
enumeration	RANDOM ASSIGNMENT	- -
enumeration	MAXIMUM LIKELIHOOD	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="type">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="ANGULAR RECONSTITUTION"/>
-      <xs:enumeration value="COMMON LINE"/>
-      <xs:enumeration value="NOT APPLICABLE"/>
-      <xs:enumeration value="OTHER"/>
-      <xs:enumeration value="PROJECTION MATCHING"/>
-      <xs:enumeration value="RANDOM ASSIGNMENT"/>
-      <xs:enumeration value="MAXIMUM LIKELIHOOD"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element angle_assignment_type / projection_matching_processing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_reference_projections{0,1} , merit_function{0,1} , angular_sampling{0,1}

-

Children

angular_sampling, merit_function, number_reference_projections

-

Instance

-

-

-

- - - - -

-

<projection_matching_processing>
-  <number_reference_projections>{0,1}</number_reference_projections>
-  <merit_function>{0,1}</merit_function>
-  <angular_sampling units="degrees">{0,1}</angular_sampling>
-</projection_matching_processing>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="projection_matching_processing" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="number_reference_projections" type="xs:positiveInteger" minOccurs="0"/>
-      <xs:element name="merit_function" type="xs:token" minOccurs="0"/>
-      <xs:element name="angular_sampling" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_angular_sampling">
-              <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element angle_assignment_type / projection_matching_processing / number_reference_projections

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_reference_projections" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element angle_assignment_type / projection_matching_processing / merit_function

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="merit_function" type="xs:token" minOccurs="0"/>

-

-

-

-

Element angle_assignment_type / projection_matching_processing / angular_sampling

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_angular_sampling

Type hierarchy

-

xs:float
- allowed_angular_sampling
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	degrees	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="angular_sampling" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_angular_sampling">
-        <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element angle_assignment_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element angle_assignment_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element helical_processing_add_group / final_angle_assignment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

angle_assignment_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

type , projection_matching_processing{0,1} , software_list{0,1} , details{0,1}

-

Children

details, projection_matching_processing, software_list, type

-

Instance

-

-

-

- - - - -

-

<final_angle_assignment>
-  <type>{1,1}</type>
-  <projection_matching_processing>{0,1}</projection_matching_processing>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</final_angle_assignment>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_angle_assignment" type="angle_assignment_type" minOccurs="0"/>

-

-

-

-

Element helical_processing_add_group / crystal_parameters

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystal_parameters_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

unit_cell , (plane_group | space_group)

-

Children

plane_group, space_group, unit_cell

-

Instance

-

-

-

- - - - -

-

<crystal_parameters>
-  <unit_cell>{1,1}</unit_cell>
-  <plane_group>{1,1}</plane_group>
-  <space_group>{1,1}</space_group>
-</crystal_parameters>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystal_parameters" type="crystal_parameters_type" minOccurs="0"/>

-

-

-

-

Element singleparticle_processing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

singleparticle_processing_type

Type hierarchy

-

base_image_processing_type
- singleparticle_processing_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

image_processing

-

Model

-

-

image_recording_id , details{0,1} , particle_selection* , ctf_correction{0,1} , startup_model* , final_reconstruction{0,1} , initial_angle_assignment{0,1} , final_angle_assignment{0,1} , final_multi_reference_alignment{0,1} , final_two_d_classification{0,1} , final_three_d_classification{0,1}

-

Children

ctf_correction, details, final_angle_assignment, final_multi_reference_alignment, final_reconstruction, final_three_d_classification, final_two_d_classification, image_recording_id, initial_angle_assignment, particle_selection, startup_model

-

Instance

-

-

-

- - - - -

-

<singleparticle_processing image_processing_id="">
-  <image_recording_id>{1,1}</image_recording_id>
-  <details>{0,1}</details>
-  <particle_selection>{0,unbounded}</particle_selection>
-  <ctf_correction>{0,1}</ctf_correction>
-  <startup_model type_of_model="">{0,unbounded}</startup_model>
-  <final_reconstruction>{0,1}</final_reconstruction>
-  <initial_angle_assignment>{0,1}</initial_angle_assignment>
-  <final_angle_assignment>{0,1}</final_angle_assignment>
-  <final_multi_reference_alignment>{0,1}</final_multi_reference_alignment>
-  <final_two_d_classification>{0,1}</final_two_d_classification>
-  <final_three_d_classification>{0,1}</final_three_d_classification>
-</singleparticle_processing>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="singleparticle_processing" substitutionGroup="image_processing" type="singleparticle_processing_type"/>

-

-

-

-

Element single_particle_proc_add_group / particle_selection

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

particle_selection_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

number_selected{0,1} , reference_model{0,1} , method{0,1} , software_list{0,1} , details{0,1}

-

Children

details, method, number_selected, reference_model, software_list

-

Instance

-

-

-

- - - - -

-

<particle_selection>
-  <number_selected>{0,1}</number_selected>
-  <reference_model>{0,1}</reference_model>
-  <method>{0,1}</method>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</particle_selection>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="particle_selection" type="particle_selection_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element particle_selection_type / number_selected

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_selected" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element particle_selection_type / reference_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="reference_model" type="xs:token" minOccurs="0"/>

-

-

-

-

Element particle_selection_type / method

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="method" type="xs:string" minOccurs="0"/>

-

-

-

-

Element particle_selection_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element particle_selection_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element single_particle_proc_add_group / ctf_correction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

ctf_correction_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

phase_reversal{0,1} , amplitude_correction{0,1} , correction_operation{0,1} , software_list{0,1} , details{0,1}

-

Children

amplitude_correction, correction_operation, details, phase_reversal, software_list

-

Instance

-

-

-

- - - - -

-

<ctf_correction>
-  <phase_reversal>{0,1}</phase_reversal>
-  <amplitude_correction>{0,1}</amplitude_correction>
-  <correction_operation>{0,1}</correction_operation>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</ctf_correction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>

-

-

-

-

Element single_particle_proc_add_group / startup_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

starting_map_type

-

Properties

-

-

-

- - - - - - - - - - - - - -

content	complex
minOccurs	0
maxOccurs	unbounded

-

-

Model

-

-

(random_conical_tilt{0,1} | orthogonal_tilt{0,1} | emdb_id{0,1} | pdb_model{0,1} | insilico_model{0,1} | other{0,1}) , details{0,1}

-

Children

details, emdb_id, insilico_model, orthogonal_tilt, other, pdb_model, random_conical_tilt

-

Instance

-

-

-

- - - - -

-

<startup_model type_of_model="">
-  <random_conical_tilt>{0,1}</random_conical_tilt>
-  <orthogonal_tilt>{0,1}</orthogonal_tilt>
-  <emdb_id>{0,1}</emdb_id>
-  <pdb_model>{0,1}</pdb_model>
-  <insilico_model>{0,1}</insilico_model>
-  <other>{0,1}</other>
-  <details>{0,1}</details>
-</startup_model>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type_of_model	xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="startup_model" type="starting_map_type" minOccurs="0" maxOccurs="unbounded"/>

-

-

-

-

Element single_particle_proc_add_group / final_reconstruction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

non_subtom_final_reconstruction_type

Type hierarchy

-

final_reconstruction_type
- non_subtom_final_reconstruction_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_classes_used{0,1} , applied_symmetry{0,1} , algorithm{0,1} , resolution{0,1} , resolution_method{0,1} , reconstruction_filtering{0,1} , software_list{0,1} , details{0,1} , number_images_used{0,1}

-

Children

algorithm, applied_symmetry, details, number_classes_used, number_images_used, reconstruction_filtering, resolution, resolution_method, software_list

-

Instance

-

-

-

- - - - -

-

<final_reconstruction>
-  <number_classes_used>{0,1}</number_classes_used>
-  <applied_symmetry>{0,1}</applied_symmetry>
-  <algorithm>{0,1}</algorithm>
-  <resolution res_type="" units="Å">{0,1}</resolution>
-  <resolution_method>{0,1}</resolution_method>
-  <reconstruction_filtering>{0,1}</reconstruction_filtering>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <number_images_used>{0,1}</number_images_used>
-</final_reconstruction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_reconstruction" type="non_subtom_final_reconstruction_type" minOccurs="0"/>

-

-

-

-

Element single_particle_proc_add_group / initial_angle_assignment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

angle_assignment_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

type , projection_matching_processing{0,1} , software_list{0,1} , details{0,1}

-

Children

details, projection_matching_processing, software_list, type

-

Instance

-

-

-

- - - - -

-

<initial_angle_assignment>
-  <type>{1,1}</type>
-  <projection_matching_processing>{0,1}</projection_matching_processing>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</initial_angle_assignment>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="initial_angle_assignment" type="angle_assignment_type" minOccurs="0"/>

-

-

-

-

Element single_particle_proc_add_group / final_angle_assignment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

angle_assignment_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

type , projection_matching_processing{0,1} , software_list{0,1} , details{0,1}

-

Children

details, projection_matching_processing, software_list, type

-

Instance

-

-

-

- - - - -

-

<final_angle_assignment>
-  <type>{1,1}</type>
-  <projection_matching_processing>{0,1}</projection_matching_processing>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</final_angle_assignment>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_angle_assignment" type="angle_assignment_type" minOccurs="0"/>

-

-

-

-

Element single_particle_proc_add_group / final_multi_reference_alignment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_reference_projections , merit_function{0,1} , angular_sampling{0,1} , software_list{0,1} , details{0,1}

-

Children

angular_sampling, details, merit_function, number_reference_projections, software_list

-

Instance

-

-

-

- - - - -

-

<final_multi_reference_alignment>
-  <number_reference_projections>{1,1}</number_reference_projections>
-  <merit_function>{0,1}</merit_function>
-  <angular_sampling units="degrees">{0,1}</angular_sampling>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</final_multi_reference_alignment>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_multi_reference_alignment" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="number_reference_projections" type="xs:positiveInteger"/>
-      <xs:element name="merit_function" minOccurs="0" type="xs:string"/>
-      <xs:element name="angular_sampling" minOccurs="0">
-        <xs:complexType>
-          <xs:simpleContent>
-            <xs:extension base="allowed_angular_sampling">
-              <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-            </xs:extension>
-          </xs:simpleContent>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element single_particle_proc_add_group / final_multi_reference_alignment / number_reference_projections

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_reference_projections" type="xs:positiveInteger"/>

-

-

-

-

Element single_particle_proc_add_group / final_multi_reference_alignment / merit_function

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="merit_function" minOccurs="0" type="xs:string"/>

-

-

-

-

Element single_particle_proc_add_group / final_multi_reference_alignment / angular_sampling

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_angular_sampling

Type hierarchy

-

xs:float
- allowed_angular_sampling
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	degrees	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="angular_sampling" minOccurs="0">
-  <xs:complexType>
-    <xs:simpleContent>
-      <xs:extension base="allowed_angular_sampling">
-        <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-      </xs:extension>
-    </xs:simpleContent>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element single_particle_proc_add_group / final_multi_reference_alignment / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element single_particle_proc_add_group / final_multi_reference_alignment / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element single_particle_proc_add_group / final_two_d_classification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

classification_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_classes{0,1} , average_number_members_per_class{0,1} , software_list{0,1} , details{0,1}

-

Children

average_number_members_per_class, details, number_classes, software_list

-

Instance

-

-

-

- - - - -

-

<final_two_d_classification>
-  <number_classes>{0,1}</number_classes>
-  <average_number_members_per_class>{0,1}</average_number_members_per_class>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</final_two_d_classification>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_two_d_classification" type="classification_type" minOccurs="0"/>

-

-

-

-

Element classification_type / number_classes

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_classes" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element classification_type / average_number_members_per_class

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Facets

-

-

-

- - - - - - -

minExclusive

0

-

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="average_number_members_per_class" minOccurs="0">
-  <xs:simpleType>
-    <xs:restriction base="xs:float">
-      <xs:minExclusive value="0"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:element>

-

-

-

-

Element classification_type / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element classification_type / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element single_particle_proc_add_group / final_three_d_classification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

classification_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_classes{0,1} , average_number_members_per_class{0,1} , software_list{0,1} , details{0,1}

-

Children

average_number_members_per_class, details, number_classes, software_list

-

Instance

-

-

-

- - - - -

-

<final_three_d_classification>
-  <number_classes>{0,1}</number_classes>
-  <average_number_members_per_class>{0,1}</average_number_members_per_class>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</final_three_d_classification>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_three_d_classification" type="classification_type" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_processing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

subtomogram_averaging_processing_type

Type hierarchy

-

base_image_processing_type
- subtomogram_averaging_processing_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

image_processing

-

Model

-

-

image_recording_id , details{0,1} , final_reconstruction{0,1} , extraction , ctf_correction{0,1} , final_multi_reference_alignment{0,1} , final_three_d_classification{0,1} , final_angle_assignment{0,1} , crystal_parameters{0,1}

-

Children

crystal_parameters, ctf_correction, details, extraction, final_angle_assignment, final_multi_reference_alignment, final_reconstruction, final_three_d_classification, image_recording_id

-

Instance

-

-

-

- - - - -

-

<subtomogram_averaging_processing image_processing_id="">
-  <image_recording_id>{1,1}</image_recording_id>
-  <details>{0,1}</details>
-  <final_reconstruction>{0,1}</final_reconstruction>
-  <extraction>{1,1}</extraction>
-  <ctf_correction>{0,1}</ctf_correction>
-  <final_multi_reference_alignment>{0,1}</final_multi_reference_alignment>
-  <final_three_d_classification>{0,1}</final_three_d_classification>
-  <final_angle_assignment>{0,1}</final_angle_assignment>
-  <crystal_parameters>{0,1}</crystal_parameters>
-</subtomogram_averaging_processing>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="subtomogram_averaging_processing" substitutionGroup="image_processing" type="subtomogram_averaging_processing_type"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / final_reconstruction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

subtomogram_final_reconstruction_type

Type hierarchy

-

final_reconstruction_type
- subtomogram_final_reconstruction_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_classes_used{0,1} , applied_symmetry{0,1} , algorithm{0,1} , resolution{0,1} , resolution_method{0,1} , reconstruction_filtering{0,1} , software_list{0,1} , details{0,1} , number_subtomograms_used{0,1}

-

Children

algorithm, applied_symmetry, details, number_classes_used, number_subtomograms_used, reconstruction_filtering, resolution, resolution_method, software_list

-

Instance

-

-

-

- - - - -

-

<final_reconstruction>
-  <number_classes_used>{0,1}</number_classes_used>
-  <applied_symmetry>{0,1}</applied_symmetry>
-  <algorithm>{0,1}</algorithm>
-  <resolution res_type="" units="Å">{0,1}</resolution>
-  <resolution_method>{0,1}</resolution_method>
-  <reconstruction_filtering>{0,1}</reconstruction_filtering>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <number_subtomograms_used>{0,1}</number_subtomograms_used>
-</final_reconstruction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_reconstruction" type="subtomogram_final_reconstruction_type" minOccurs="0"/>

-

-

-

-

Element subtomogram_final_reconstruction_type / number_subtomograms_used

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_subtomograms_used" type="xs:positiveInteger" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / extraction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Model

-

-

number_tomograms , number_images_used , reference_model{0,1} , method{0,1} , software_list{0,1} , details{0,1}

-

Children

details, method, number_images_used, number_tomograms, reference_model, software_list

-

Instance

-

-

-

- - - - -

-

<extraction>
-  <number_tomograms>{1,1}</number_tomograms>
-  <number_images_used>{1,1}</number_images_used>
-  <reference_model>{0,1}</reference_model>
-  <method>{0,1}</method>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</extraction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="extraction">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="number_tomograms" type="xs:positiveInteger"/>
-      <xs:element name="number_images_used" type="xs:positiveInteger"/>
-      <xs:element name="reference_model" type="xs:token" minOccurs="0"/>
-      <xs:element name="method" type="xs:string" minOccurs="0"/>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element subtomogram_averaging_proc_add_group / extraction / number_tomograms

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_tomograms" type="xs:positiveInteger"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / extraction / number_images_used

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_images_used" type="xs:positiveInteger"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / extraction / reference_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="reference_model" type="xs:token" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / extraction / method

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="method" type="xs:string" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / extraction / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / extraction / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / ctf_correction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

ctf_correction_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

phase_reversal{0,1} , amplitude_correction{0,1} , correction_operation{0,1} , software_list{0,1} , details{0,1}

-

Children

amplitude_correction, correction_operation, details, phase_reversal, software_list

-

Instance

-

-

-

- - - - -

-

<ctf_correction>
-  <phase_reversal>{0,1}</phase_reversal>
-  <amplitude_correction>{0,1}</amplitude_correction>
-  <correction_operation>{0,1}</correction_operation>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</ctf_correction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / final_multi_reference_alignment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_reference_projections , merit_function{0,1} , software_list{0,1} , details{0,1}

-

Children

details, merit_function, number_reference_projections, software_list

-

Instance

-

-

-

- - - - -

-

<final_multi_reference_alignment>
-  <number_reference_projections>{1,1}</number_reference_projections>
-  <merit_function>{0,1}</merit_function>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</final_multi_reference_alignment>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_multi_reference_alignment" minOccurs="0">
-  <xs:complexType>
-    <xs:sequence>
-      <xs:element name="number_reference_projections" type="xs:positiveInteger"/>
-      <xs:element name="merit_function" minOccurs="0" type="xs:string"/>
-      <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-      <xs:element name="details" type="xs:string" minOccurs="0"/>
-    </xs:sequence>
-  </xs:complexType>
-</xs:element>

-

-

-

-

Element subtomogram_averaging_proc_add_group / final_multi_reference_alignment / number_reference_projections

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_reference_projections" type="xs:positiveInteger"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / final_multi_reference_alignment / merit_function

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="merit_function" minOccurs="0" type="xs:string"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / final_multi_reference_alignment / software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<software_list>
-  <software>{0,unbounded}</software>
-</software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / final_multi_reference_alignment / details

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Properties

-

-

-

- - - - - - - - - -

content	simple
minOccurs	0

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="details" type="xs:string" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / final_three_d_classification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

classification_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_classes{0,1} , average_number_members_per_class{0,1} , software_list{0,1} , details{0,1}

-

Children

average_number_members_per_class, details, number_classes, software_list

-

Instance

-

-

-

- - - - -

-

<final_three_d_classification>
-  <number_classes>{0,1}</number_classes>
-  <average_number_members_per_class>{0,1}</average_number_members_per_class>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</final_three_d_classification>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_three_d_classification" type="classification_type" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / final_angle_assignment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

angle_assignment_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

type , projection_matching_processing{0,1} , software_list{0,1} , details{0,1}

-

Children

details, projection_matching_processing, software_list, type

-

Instance

-

-

-

- - - - -

-

<final_angle_assignment>
-  <type>{1,1}</type>
-  <projection_matching_processing>{0,1}</projection_matching_processing>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</final_angle_assignment>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_angle_assignment" type="angle_assignment_type" minOccurs="0"/>

-

-

-

-

Element subtomogram_averaging_proc_add_group / crystal_parameters

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystal_parameters_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

unit_cell , (plane_group | space_group)

-

Children

plane_group, space_group, unit_cell

-

Instance

-

-

-

- - - - -

-

<crystal_parameters>
-  <unit_cell>{1,1}</unit_cell>
-  <plane_group>{1,1}</plane_group>
-  <space_group>{1,1}</space_group>
-</crystal_parameters>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystal_parameters" type="crystal_parameters_type" minOccurs="0"/>

-

-

-

-

Element tomography_processing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

tomography_processing_type

Type hierarchy

-

base_image_processing_type
- tomography_processing_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

image_processing

-

Model

-

-

image_recording_id , details{0,1} , final_reconstruction{0,1} , series_aligment_software_list{0,1} , ctf_correction{0,1} , crystal_parameters{0,1}

-

Children

crystal_parameters, ctf_correction, details, final_reconstruction, image_recording_id, series_aligment_software_list

-

Instance

-

-

-

- - - - -

-

<tomography_processing image_processing_id="">
-  <image_recording_id>{1,1}</image_recording_id>
-  <details>{0,1}</details>
-  <final_reconstruction>{0,1}</final_reconstruction>
-  <series_aligment_software_list>{0,1}</series_aligment_software_list>
-  <ctf_correction>{0,1}</ctf_correction>
-  <crystal_parameters>{0,1}</crystal_parameters>
-</tomography_processing>

-

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="tomography_processing" substitutionGroup="image_processing" type="tomography_processing_type"/>

-

-

-

-

Element tomography_proc_add_group / final_reconstruction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

non_subtom_final_reconstruction_type

Type hierarchy

-

final_reconstruction_type
- non_subtom_final_reconstruction_type
-

-

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

number_classes_used{0,1} , applied_symmetry{0,1} , algorithm{0,1} , resolution{0,1} , resolution_method{0,1} , reconstruction_filtering{0,1} , software_list{0,1} , details{0,1} , number_images_used{0,1}

-

Children

algorithm, applied_symmetry, details, number_classes_used, number_images_used, reconstruction_filtering, resolution, resolution_method, software_list

-

Instance

-

-

-

- - - - -

-

<final_reconstruction>
-  <number_classes_used>{0,1}</number_classes_used>
-  <applied_symmetry>{0,1}</applied_symmetry>
-  <algorithm>{0,1}</algorithm>
-  <resolution res_type="" units="Å">{0,1}</resolution>
-  <resolution_method>{0,1}</resolution_method>
-  <reconstruction_filtering>{0,1}</reconstruction_filtering>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-  <number_images_used>{0,1}</number_images_used>
-</final_reconstruction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="final_reconstruction" type="non_subtom_final_reconstruction_type" minOccurs="0"/>

-

-

-

-

Element tomography_proc_add_group / series_aligment_software_list

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

software_list_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

software*

-

Children

software

-

Instance

-

-

-

- - - - -

-

<series_aligment_software_list>
-  <software>{0,unbounded}</software>
-</series_aligment_software_list>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="series_aligment_software_list" type="software_list_type" minOccurs="0"/>

-

-

-

-

Element tomography_proc_add_group / ctf_correction

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

ctf_correction_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

phase_reversal{0,1} , amplitude_correction{0,1} , correction_operation{0,1} , software_list{0,1} , details{0,1}

-

Children

amplitude_correction, correction_operation, details, phase_reversal, software_list

-

Instance

-

-

-

- - - - -

-

<ctf_correction>
-  <phase_reversal>{0,1}</phase_reversal>
-  <amplitude_correction>{0,1}</amplitude_correction>
-  <correction_operation>{0,1}</correction_operation>
-  <software_list>{0,1}</software_list>
-  <details>{0,1}</details>
-</ctf_correction>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>

-

-

-

-

Element tomography_proc_add_group / crystal_parameters

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystal_parameters_type

-

Properties

-

-

-

- - - - - - - - - -

content	complex
minOccurs	0

-

-

Model

-

-

unit_cell , (plane_group | space_group)

-

Children

plane_group, space_group, unit_cell

-

Instance

-

-

-

- - - - -

-

<crystal_parameters>
-  <unit_cell>{1,1}</unit_cell>
-  <plane_group>{1,1}</plane_group>
-  <space_group>{1,1}</space_group>
-</crystal_parameters>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystal_parameters" type="crystal_parameters_type" minOccurs="0"/>

-

-

-

-

Element crystallography_validation

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

crystallography_validation_type

Type hierarchy

-

validation_type
- crystallography_validation_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

validation_method

-

Model

-

-

file , details{0,1} , parallel_resolution , perpendicular_resolution , number_observed_reflections , number_unique_reflections , weighted_phase_residual , weighted_r_factor , data_completeness

-

Children

data_completeness, details, file, number_observed_reflections, number_unique_reflections, parallel_resolution, perpendicular_resolution, weighted_phase_residual, weighted_r_factor

-

Instance

-

-

-

- - - - -

-

<crystallography_validation>
-  <file>{1,1}</file>
-  <details>{0,1}</details>
-  <parallel_resolution>{1,1}</parallel_resolution>
-  <perpendicular_resolution>{1,1}</perpendicular_resolution>
-  <number_observed_reflections>{1,1}</number_observed_reflections>
-  <number_unique_reflections>{1,1}</number_unique_reflections>
-  <weighted_phase_residual>{1,1}</weighted_phase_residual>
-  <weighted_r_factor>{1,1}</weighted_r_factor>
-  <data_completeness>{1,1}</data_completeness>
-</crystallography_validation>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="crystallography_validation" substitutionGroup="validation_method" type="crystallography_validation_type"/>

-

-

-

-

Element crystallography_validation_type / parallel_resolution

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="parallel_resolution"/>

-

-

-

-

Element crystallography_validation_type / perpendicular_resolution

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="perpendicular_resolution"/>

-

-

-

-

Element crystallography_validation_type / number_observed_reflections

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_observed_reflections"/>

-

-

-

-

Element crystallography_validation_type / number_unique_reflections

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="number_unique_reflections"/>

-

-

-

-

Element crystallography_validation_type / weighted_phase_residual

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="weighted_phase_residual"/>

-

-

-

-

Element crystallography_validation_type / weighted_r_factor

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="weighted_r_factor"/>

-

-

-

-

Element crystallography_validation_type / data_completeness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Source

-

-

-

- - - - -

-

<xs:element name="data_completeness"/>

-

-

-

-

Element fsc_curve

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

fsc_curve_validation_type

Type hierarchy

-

validation_type
- fsc_curve_validation_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

validation_method

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Instance

-

-

-

- - - - -

-

<fsc_curve>
-  <file>{1,1}</file>
-  <details>{0,1}</details>
-</fsc_curve>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="fsc_curve" substitutionGroup="validation_method" type="fsc_curve_validation_type"/>

-

-

-

-

Element layer_lines

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

layer_lines_validation_type

Type hierarchy

-

validation_type
- layer_lines_validation_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

validation_method

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Instance

-

-

-

- - - - -

-

<layer_lines>
-  <file>{1,1}</file>
-  <details>{0,1}</details>
-</layer_lines>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="layer_lines" substitutionGroup="validation_method" type="layer_lines_validation_type"/>

-

-

-

-

Element structure_factors

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

structure_factors_validation_type

Type hierarchy

-

validation_type
- structure_factors_validation_type
-

-

-

Properties

-

-

-

- - - - - -

content

complex

-

-

Substitution Group Affiliation

-

validation_method

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Instance

-

-

-

- - - - -

-

<structure_factors>
-  <file>{1,1}</file>
-  <details>{0,1}</details>
-</structure_factors>

-

-

-

-

Source

-

-

-

- - - - -

-

<xs:element name="structure_factors" substitutionGroup="validation_method" type="structure_factors_validation_type"/>

-

-

-

-

Complex Type entry_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

emd

-

-

Model

-

-

admin , crossreferences , sample , structure_determination_list , map , interpretation{0,1} , validation{0,1}

-

Children

admin, crossreferences, interpretation, map, sample, structure_determination_list, validation

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
emdb_id	emdb_id_type		required	- -
version	xs:token	3.0.10.0	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="entry_type">
-  <xs:sequence>
-    <xs:element name="admin" type="admin_type"/>
-    <xs:element name="crossreferences" type="crossreferences_type"/>
-    <xs:element name="sample" type="sample_type"/>
-    <xs:element name="structure_determination_list">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="structure_determination" type="structure_determination_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="map" type="map_type"/>
-    <xs:element name="interpretation" type="interpretation_type" minOccurs="0"/>
-    <xs:element name="validation" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element ref="validation_method" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-  </xs:sequence>
-  <xs:attribute name="emdb_id" type="emdb_id_type" use="required"/>
-  <xs:attribute name="version" type="xs:token" default="3.0.10.0"/>
-  <!-- <xs:attribute name="composite_structure" type="xs:boolean"/> -->
-</xs:complexType>

-

-

-

-

Complex Type admin_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

entry_type/admin

-

-

Model

-

-

status_history_list{0,1} , current_status , revision_history{0,1} , sites , key_dates , obsolete_list{0,1} , superseded_by_list{0,1} , grant_support{0,1} , microscopy_center{0,1} , contact_author* , title , authors_list , details{0,1} , keywords{0,1} , replace_existing_entry{0,1}

-

Children

authors_list, contact_author, current_status, details, grant_support, key_dates, keywords, microscopy_center, obsolete_list, replace_existing_entry, revision_history, sites, status_history_list, superseded_by_list, title

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
composite_map	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="admin_type">
-  <xs:sequence>
-    <xs:element name="status_history_list" type="version_list_type" minOccurs="0"/>
-    <xs:element name="current_status" type="version_type"/>
-    <xs:element minOccurs="0" name="revision_history">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="revision" type="revision_history_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="sites">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="deposition">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:enumeration value="PDBe"/>
-                <xs:enumeration value="PDBj"/>
-                <xs:enumeration value="RCSB"/>
-                <xs:enumeration value="PDBc"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-          <xs:element name="last_processing">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:enumeration value="PDBe"/>
-                <xs:enumeration value="PDBj"/>
-                <xs:enumeration value="RCSB"/>
-                <xs:enumeration value="PDBc"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="key_dates">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="deposition" type="xs:date"/>
-          <xs:element name="header_release" type="xs:date" minOccurs="0"/>
-          <xs:element name="map_release" type="xs:date" minOccurs="0"/>
-          <xs:element name="obsolete" type="xs:date" minOccurs="0"/>
-          <xs:element name="update" type="xs:date"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="obsolete_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="entry" type="supersedes_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="superseded_by_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="entry" type="supersedes_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="grant_support" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="grant_reference" type="grant_reference_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="microscopy_center" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="name">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:enumeration value="MICRO_CENTER_1"/>
-                <xs:enumeration value="MICRO_CENTER_2"/>
-                <xs:enumeration value="MICRO_CENTER_3"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-          <xs:element name="country">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:enumeration value="UK"/>
-                <xs:enumeration value="USA"/>
-                <xs:enumeration value="Japan"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="contact_author" minOccurs="0" maxOccurs="unbounded">
-      <xs:complexType>
-        <xs:complexContent>
-          <xs:extension base="contact_details_type">
-            <xs:attribute name="private" fixed="true" use="required"/>
-          </xs:extension>
-        </xs:complexContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="title" type="xs:token"/>
-    <xs:element name="authors_list">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="author" type="author_ORCID_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="details" type="xs:token" minOccurs="0"/>
-    <xs:element name="keywords" type="xs:string" minOccurs="0"/>
-    <xs:element name="replace_existing_entry" type="xs:boolean" minOccurs="0"/>
-  </xs:sequence>
-  <xs:attribute name="composite_map" type="xs:boolean"/>
-</xs:complexType>

-

-

-

-

Complex Type version_list_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

admin_type/status_history_list

-

-

Model

-

-

status+

-

Children

status

-

Source

-

-

-

- - - - -

-

<xs:complexType name="version_list_type">
-  <xs:sequence>
-    <xs:element name="status" maxOccurs="unbounded">
-      <xs:complexType>
-        <xs:complexContent>
-          <xs:extension base="version_type">
-            <xs:attribute name="status_id" type="xs:positiveInteger" use="required"/>
-          </xs:extension>
-        </xs:complexContent>
-      </xs:complexType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type version_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

admin_type/current_status, version_list_type/status

-

-

Model

-

-

date{0,1} , code , processing_site{0,1} , annotator{0,1} , details{0,1}

-

Children

annotator, code, date, details, processing_site

-

Source

-

-

-

- - - - -

-

<xs:complexType name="version_type">
-  <xs:sequence>
-    <xs:element name="date" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:date">
-          <xs:minInclusive value="2002-01-01"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="code" type="code_type"/>
-    <xs:element name="processing_site" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="PDBe"/>
-          <xs:enumeration value="RCSB"/>
-          <xs:enumeration value="PDBj"/>
-          <xs:enumeration value="PDBc"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="annotator" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="xs:token">
-            <xs:attribute name="private" type="xs:token" fixed="true" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type code_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of status_code_type

Type hierarchy

-

xs:token
- status_code_type
  - code_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

version_type/code

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
superseded	xs:boolean	optional	- -
supersedes	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="code_type">
-  <xs:simpleContent>
-    <xs:extension base="status_code_type">
-      <xs:attribute name="superseded" type="xs:boolean"/>
-      <xs:attribute name="supersedes" type="xs:boolean"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type status_code_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	AUCO	- -
enumeration	AUTH	- -
enumeration	AUXS	- -
enumeration	AUXU	- -
enumeration	HOLD	- -
enumeration	HOLD8W	- -
enumeration	HPUB	- -
enumeration	OBS	- -
enumeration	POLC	- -
enumeration	PROC	- -
enumeration	REFI	- -
enumeration	REL	- -
enumeration	REPL	- -
enumeration	REUP	- -
enumeration	WAIT	- -
enumeration	WDRN	- -

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

code_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="status_code_type">
-  <xs:restriction base="xs:token">
-    <xs:enumeration value="AUCO"/>
-    <xs:enumeration value="AUTH"/>
-    <xs:enumeration value="AUXS"/>
-    <xs:enumeration value="AUXU"/>
-    <xs:enumeration value="HOLD"/>
-    <xs:enumeration value="HOLD8W"/>
-    <xs:enumeration value="HPUB"/>
-    <xs:enumeration value="OBS"/>
-    <xs:enumeration value="POLC"/>
-    <xs:enumeration value="PROC"/>
-    <xs:enumeration value="REFI"/>
-    <xs:enumeration value="REL"/>
-    <xs:enumeration value="REPL"/>
-    <xs:enumeration value="REUP"/>
-    <xs:enumeration value="WAIT"/>
-    <xs:enumeration value="WDRN"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type revision_history_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

admin_type/revision_history/revision

-

-

Model

-

-

change_list

-

Children

change_list

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
date	xs:date	required	- -
version	revision_history_version_type	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="revision_history_type">
-  <xs:sequence>
-    <xs:element name="change_list" maxOccurs="1">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element ref="revision_change_sub_group" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-  </xs:sequence>
-  <xs:attribute name="version" type="revision_history_version_type" use="required"/>
-  <xs:attribute name="date" type="xs:date" use="required"/>
-</xs:complexType>

-

-

-

-

Complex Type base_revision_change_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - - - - - -

Element	revision_change_sub_group
Complex Types	complex_revision_change_type, part_revision_change_type

-

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}

-

Children

description, details, provider, revision_group, revision_type

-

Source

-

-

-

- - - - -

-

<xs:complexType name="base_revision_change_type">
-  <xs:sequence>
-    <xs:element name="revision_type">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="INITIAL_RELEASE"/>
-          <xs:enumeration value="COORDINATE_REPLACEMENT"/>
-          <xs:enumeration value="OBSOLETE"/>
-          <xs:enumeration value="REMEDIATION"/>
-          <xs:enumeration value="DATA_ADDED"/>
-          <xs:enumeration value="DATA_UPDATED"/>
-          <xs:enumeration value="DATA_REMOVED"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="provider">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="REPOSITORY"/>
-          <xs:enumeration value="AUTHOR"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="description" type="xs:token" minOccurs="0"/>
-    <xs:element name="details" type="xs:token" minOccurs="0"/>
-    <xs:element name="revision_group" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="EXPERIMENTAL_DATA"/>
-          <xs:enumeration value="DERIVED_DATA"/>
-          <xs:enumeration value="EXPERIMENTAL_SUMMARY"/>
-          <xs:enumeration value="EXPERIMENTAL_PREPARATION"/>
-          <xs:enumeration value="DATABASE_REFERENCES"/>
-          <xs:enumeration value="DATA_COLLECTION"/>
-          <xs:enumeration value="ADVISORY"/>
-          <xs:enumeration value="SOURCE_AND_TAXONOMY"/>
-          <xs:enumeration value="REFINEMENT_DESCRIPTION"/>
-          <xs:enumeration value="DATA_PROCESSING"/>
-          <xs:enumeration value="STRUCTURE_SUMMARY"/>
-          <xs:enumeration value="VERSION_FORMAT_COMPLIANCE"/>
-          <xs:enumeration value="OTHER"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type revision_history_version_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - -

pattern

[0-9]+\.[0-9]+

-

-

-

-

-

Used by

-

-

-

- - - - - -

Attribute

revision_history_type/@version

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="revision_history_version_type">
-  <xs:restriction base="xs:token">
-    <xs:pattern value="[0-9]+\.[0-9]+"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type supersedes_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

admin_type/obsolete_list/entry, admin_type/superseded_by_list/entry

-

-

Model

-

-

date , entry , details{0,1}

-

Children

date, details, entry

-

Source

-

-

-

- - - - -

-

<xs:complexType name="supersedes_type">
-  <xs:sequence>
-    <xs:element name="date" type="xs:date"/>
-    <xs:element name="entry" type="emdb_id_type"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type emdb_id_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - -

pattern

EMD-\d{4,}

-

-

-

-

-

Used by

-

-

-

- - - - - - - - - -

Elements	emdb_cross_reference_type/emdb_id, starting_map_type/emdb_id, supersedes_type/entry
Attribute	entry_type/@emdb_id

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="emdb_id_type">
-  <xs:restriction base="xs:token">
-    <xs:pattern value="EMD-\d{4,}"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type grant_reference_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

admin_type/grant_support/grant_reference

-

-

Model

-

-

funding_body , code{0,1} , country{0,1}

-

Children

code, country, funding_body

-

Source

-

-

-

- - - - -

-

<xs:complexType name="grant_reference_type">
-  <xs:sequence>
-    <xs:element name="funding_body" type="xs:token"/>
-    <xs:element name="code" type="xs:token" minOccurs="0"/>
-    <xs:element name="country" type="xs:token" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type contact_details_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

admin_type/contact_author

-

-

Model

-

-

role , title , first_name , middle_name , last_name , organization , street , town_or_city , state_or_province , country , post_or_zip_code , email , telephone , fax

-

Children

country, email, fax, first_name, last_name, middle_name, organization, post_or_zip_code, role, state_or_province, street, telephone, title, town_or_city

-

Source

-

-

-

- - - - -

-

<xs:complexType name="contact_details_type">
-  <xs:sequence>
-    <xs:element name="role">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="INVESTIGATOR"/>
-          <xs:enumeration value="PRINCIPAL INVESTIGATOR/GROUP LEADER"/>
-          <xs:enumeration value="RESPONSIBLE SCIENTIST"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="title">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="DR."/>
-          <xs:enumeration value="MR."/>
-          <xs:enumeration value="MRS."/>
-          <xs:enumeration value="MS."/>
-          <xs:enumeration value="PROF."/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="first_name" type="xs:token"/>
-    <xs:element name="middle_name">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="[A-Z]"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="last_name" type="xs:token"/>
-    <xs:element name="organization">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="xs:token">
-            <xs:attribute name="type" use="required">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="ACADEMIC"/>
-                  <xs:enumeration value="COMMERCIAL"/>
-                  <xs:enumeration value="GOVERMENT"/>
-                  <xs:enumeration value="OTHER"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:attribute>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="street" type="xs:string"/>
-    <xs:element name="town_or_city" type="xs:token"/>
-    <xs:element name="state_or_province" type="xs:token"/>
-    <xs:element name="country" type="xs:token"/>
-    <xs:element name="post_or_zip_code" type="xs:token"/>
-    <xs:element name="email">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="[A-Za-z0-9._%+-]+@[A-Za-z0-9.-]+\.[A-Za-z]{2,4}"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="telephone" type="telephone_number_type"/>
-    <xs:element name="fax" type="telephone_number_type"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type telephone_number_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

contact_details_type/fax, contact_details_type/telephone

-

-

Model

-

-

country , area , local

-

Children

area, country, local

-

Source

-

-

-

- - - - -

-

<xs:complexType name="telephone_number_type">
-  <xs:sequence>
-    <xs:element name="country">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="\d{1,3}"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="area">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="\d{2,5}"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="local">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="\d+( ext. \d+)?"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type author_ORCID_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of author_type

Type hierarchy

-

xs:anySimpleType
- author_type
  - author_ORCID_type
  -
-

-

-

Used by

-

-

-

- - - - - - - - - -

Element	admin_type/authors_list/author
Complex Type	author_order_type

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
ORCID	ORCID_type	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="author_ORCID_type">
-  <xs:simpleContent>
-    <xs:extension base="author_type">
-      <xs:attribute name="ORCID" type="ORCID_type"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type author_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

union of(author_enums, restriction of xs:token)

-

Used by

-

-

-

- - - - - -

Complex Type

author_ORCID_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="author_type">
-  <xs:union memberTypes="author_enums">
-    <xs:simpleType>
-      <xs:restriction base="xs:token">
-        <xs:pattern value="([A-Za-z' \-]+ (Jr.?|I|II|III|IV|1st|2nd|3rd|4th)?) ?([A-Za-z\-]*)"/>
-      </xs:restriction>
-    </xs:simpleType>
-  </xs:union>
-</xs:simpleType>

-

-

-

-

Simple Type ORCID_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - -

pattern

[0-9]{4}-[0-9]{4}-[0-9]{4}-([0-9]{3}X|[0-9]{4})

-

-

-

-

-

Used by

-

-

-

- - - - - -

Attribute

author_ORCID_type/@ORCID

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="ORCID_type">
-  <xs:restriction base="xs:token">
-    <xs:pattern value="[0-9]{4}-[0-9]{4}-[0-9]{4}-([0-9]{3}X|[0-9]{4})"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type crossreferences_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

entry_type/crossreferences

-

-

Model

-

-

citation_list , emdb_list{0,1} , pdb_list{0,1} , other_db_list{0,1} , auxiliary_link_list{0,1}

-

Children

auxiliary_link_list, citation_list, emdb_list, other_db_list, pdb_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="crossreferences_type">
-  <xs:sequence>
-    <xs:element name="citation_list">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="primary_citation">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element ref="citation_type"/>
-              </xs:sequence>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="secondary_citation" minOccurs="0" maxOccurs="unbounded">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element ref="citation_type"/>
-              </xs:sequence>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="emdb_list" type="emdb_cross_reference_list_type" minOccurs="0"/>
-    <xs:element name="pdb_list" type="pdb_cross_reference_list_type" minOccurs="0"/>
-    <xs:element name="other_db_list" type="other_db_cross_reference_list_type" minOccurs="0"/>
-    <xs:element name="auxiliary_link_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence minOccurs="1" maxOccurs="1">
-          <xs:element name="auxiliary_link" type="auxiliary_link_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <!-- 
-            <xs:element name="component_maps" minOccurs="0">
-                <xs:complexType>
-                    <xs:sequence>
-                        <xs:element name="component_map" maxOccurs="unbounded">
-                            <xs:complexType>
-                                <xs:sequence>
-                                    <xs:element name="comp_map_id" type="emdb_id_type" minOccurs="0"/>
-                                    <xs:element name="details" type="xs:string" minOccurs="0"/>
-                                </xs:sequence>
-                            </xs:complexType>
-                        </xs:element>
-                    </xs:sequence>
-                </xs:complexType>
-            </xs:element>
-            -->
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type emdb_cross_reference_list_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

crossreferences_type/emdb_list

-

-

Model

-

-

emdb_reference+

-

Children

emdb_reference

-

Source

-

-

-

- - - - -

-

<xs:complexType name="emdb_cross_reference_list_type">
-  <xs:sequence minOccurs="1" maxOccurs="1">
-    <xs:element name="emdb_reference" type="emdb_cross_reference_type" maxOccurs="unbounded"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type emdb_cross_reference_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

emdb_cross_reference_list_type/emdb_reference

-

-

Model

-

-

emdb_id , relationship{0,1} , details{0,1}

-

Children

details, emdb_id, relationship

-

Source

-

-

-

- - - - -

-

<xs:complexType name="emdb_cross_reference_type">
-  <xs:sequence>
-    <xs:element name="emdb_id" type="emdb_id_type"/>
-    <xs:element name="relationship" minOccurs="0">
-      <xs:complexType>
-        <xs:choice>
-          <xs:element name="in_frame">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:enumeration value="NOOVERLAP"/>
-                <xs:enumeration value="PARTIALOVERLAP"/>
-                <xs:enumeration value="FULLOVERLAP"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-          <xs:element name="other" type="xs:string"/>
-        </xs:choice>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type pdb_cross_reference_list_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

crossreferences_type/pdb_list

-

-

Model

-

-

pdb_reference+

-

Children

pdb_reference

-

Source

-

-

-

- - - - -

-

<xs:complexType name="pdb_cross_reference_list_type">
-  <xs:sequence minOccurs="1" maxOccurs="1">
-    <xs:element name="pdb_reference" type="pdb_cross_reference_type" maxOccurs="unbounded"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type pdb_cross_reference_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

pdb_cross_reference_list_type/pdb_reference

-

-

Model

-

-

pdb_id , relationship{0,1} , details{0,1}

-

Children

details, pdb_id, relationship

-

Source

-

-

-

- - - - -

-

<xs:complexType name="pdb_cross_reference_type">
-  <xs:sequence>
-    <xs:element name="pdb_id" type="pdb_code_type"/>
-    <xs:element name="relationship" minOccurs="0">
-      <xs:complexType>
-        <xs:choice>
-          <xs:element name="in_frame">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:enumeration value="NOOVERLAP"/>
-                <xs:enumeration value="PARTIALOVERLAP"/>
-                <xs:enumeration value="FULLOVERLAP"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-          <xs:element name="other" type="xs:string"/>
-        </xs:choice>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type pdb_code_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - -

pattern

\d[\dA-Za-z]{3}|pdb_\d{5}[\dA-Za-z]{3}

-

-

-

-

-

Used by

-

-

-

- - - - - -

Elements

modelling_type/final_model/access_code, molecular_replacement_type/starting_model/access_code, pdb_cross_reference_type/pdb_id, pdb_model_type/pdb_id

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="pdb_code_type">
-  <xs:restriction base="xs:token">
-    <xs:pattern value="\d[\dA-Za-z]{3}|pdb_\d{5}[\dA-Za-z]{3}"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type other_db_cross_reference_list_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

crossreferences_type/other_db_list

-

-

Model

-

-

db_reference+

-

Children

db_reference

-

Source

-

-

-

- - - - -

-

<xs:complexType name="other_db_cross_reference_list_type">
-  <xs:sequence minOccurs="1" maxOccurs="1">
-    <xs:element name="db_reference" type="other_db_cross_reference_type" maxOccurs="unbounded"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type other_db_cross_reference_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

other_db_cross_reference_list_type/db_reference

-

-

Model

-

-

db_name , accession_id , content_type{0,1} , details{0,1}

-

Children

accession_id, content_type, db_name, details

-

Source

-

-

-

- - - - -

-

<xs:complexType name="other_db_cross_reference_type">
-  <xs:sequence>
-    <xs:element name="db_name" type="xs:token"/>
-    <xs:element name="accession_id" type="xs:token"/>
-    <xs:element name="content_type" type="xs:token" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type auxiliary_link_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

crossreferences_type/auxiliary_link_list/auxiliary_link

-

-

Model

-

-

type , link , details{0,1}

-

Children

details, link, type

-

Source

-

-

-

- - - - -

-

<xs:complexType name="auxiliary_link_type">
-  <xs:sequence>
-    <xs:element name="type">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="2D EM DATA"/>
-          <xs:enumeration value="CORRELATIVE LIGHT MICROSCOPY"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="link">
-      <xs:simpleType>
-        <xs:restriction base="xs:anyURI">
-          <xs:pattern value="(https?|ftp)://.*"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type sample_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

entry_type/sample

-

-

Model

-

-

name , supramolecule_list , macromolecule_list{0,1}

-

Children

macromolecule_list, name, supramolecule_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="sample_type">
-  <xs:sequence>
-    <xs:element name="name" type="sci_name_type"/>
-    <xs:element name="supramolecule_list" maxOccurs="1">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element ref="supramolecule" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="macromolecule_list" type="macromolecule_list_type" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type sci_name_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Used by

-

-

-

- - - - - -

Elements

base_macromolecule_type/name, base_supramolecule_type/name, sample_type/name

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
synonym	xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="sci_name_type">
-  <xs:simpleContent>
-    <xs:extension base="xs:token">
-      <xs:attribute name="synonym" type="xs:token"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Complex Type base_supramolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - - - - - -

Element	supramolecule
Complex Types	cell_supramolecule_type, complex_supramolecule_type, organelle_or_cellular_component_supramolecule_type, sample_supramolecule_type, tissue_supramolecule_type, virus_supramolecule_type

-

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1}

-

Children

category, details, external_references, macromolecule_list, name, number_of_copies, oligomeric_state, parent, recombinant_exp_flag

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="base_supramolecule_type">
-  <xs:sequence>
-    <xs:element name="name" type="sci_name_type"/>
-    <xs:element name="category" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="complex_category_type">
-            <xs:attribute name="type" use="required">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="GO"/>
-                  <xs:enumeration value="ARBITRARY DEFINITION"/>
-                  <xs:enumeration value="PROTEIN ONTOLOGY"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:attribute>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="parent" type="xs:nonNegativeInteger"/>
-    <xs:element name="macromolecule_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="macromolecule" maxOccurs="unbounded">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element name="macromolecule_id" type="xs:positiveInteger"/>
-                <xs:element name="number_of_copies" type="xs:positiveInteger" minOccurs="0"/>
-              </xs:sequence>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-    <xs:element name="number_of_copies" type="pos_int_or_string_type" minOccurs="0"/>
-    <xs:element name="oligomeric_state" type="pos_int_or_string_type" minOccurs="0"/>
-    <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="xs:token">
-            <xs:attribute name="type" use="required">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="UNIPROTKB"/>
-                  <xs:enumeration value="UNIPARC"/>
-                  <xs:enumeration value="INTERPRO"/>
-                  <xs:enumeration value="GO"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:attribute>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="recombinant_exp_flag" type="xs:boolean" minOccurs="0" maxOccurs="1"/>
-  </xs:sequence>
-  <xs:attribute name="supramolecule_id" type="xs:positiveInteger" use="required"/>
-</xs:complexType>

-

-

-

-

Simple Type complex_category_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - -

pattern

GO:\d+

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

base_supramolecule_type/category

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="complex_category_type">
-  <xs:restriction base="xs:token">
-    <xs:pattern value="GO:\d+"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type pos_int_or_string_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

union of(xs:positiveInteger, xs:string)

-

Used by

-

-

-

- - - - - -

Elements

base_macromolecule_type/number_of_copies, base_macromolecule_type/oligomeric_state, base_supramolecule_type/number_of_copies, base_supramolecule_type/oligomeric_state

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="pos_int_or_string_type">
-  <xs:union memberTypes="xs:positiveInteger xs:string"/>
-</xs:simpleType>

-

-

-

-

Complex Type macromolecule_list_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

sample_type/macromolecule_list

-

-

Model

-

-

macromolecule+

-

Children

macromolecule

-

Source

-

-

-

- - - - -

-

<xs:complexType name="macromolecule_list_type">
-  <xs:sequence>
-    <xs:element ref="macromolecule" maxOccurs="unbounded"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type base_macromolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - - - - - -

Element	macromolecule
Complex Types	dna_macromolecule_type, em_label_macromolecule_type, ligand_macromolecule_type, other_macromolecule_type, protein_or_peptide_macromolecule_type, rna_macromolecule_type, saccharide_macromolecule_type

-

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1}

-

Children

details, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="base_macromolecule_type">
-  <xs:sequence>
-    <xs:element name="name" type="sci_name_type"/>
-    <xs:element name="natural_source" type="macromolecule_source_type" minOccurs="0"/>
-    <xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-    <xs:element name="number_of_copies" type="pos_int_or_string_type" minOccurs="0"/>
-    <xs:element name="oligomeric_state" type="pos_int_or_string_type" minOccurs="0"/>
-    <xs:element name="recombinant_exp_flag" type="xs:boolean" minOccurs="0" maxOccurs="1"/>
-  </xs:sequence>
-  <xs:attribute name="macromolecule_id" type="xs:positiveInteger" use="required"/>
-  <xs:attribute name="mutant" type="xs:boolean"/>
-  <xs:attribute name="chimera" type="xs:boolean"/>
-</xs:complexType>

-

-

-

-

Complex Type macromolecule_source_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_source_type

Type hierarchy

-

base_source_type
- macromolecule_source_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

base_macromolecule_type/natural_source, dna_macromolecule_type/synthetic_source, em_label_macromolecule_type/synthetic_source, other_macromolecule_type/synthetic_source, protein_or_peptide_macromolecule_type/synthetic_source, rna_macromolecule_type/synthetic_source

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="macromolecule_source_type">
-  <xs:complexContent>
-    <xs:extension base="base_source_type">
-      <xs:sequence>
-        <xs:element name="organ" type="xs:token" minOccurs="0"/>
-        <xs:element name="tissue" type="xs:token" minOccurs="0"/>
-        <xs:element name="cell" type="xs:token" minOccurs="0"/>
-        <xs:element name="organelle" type="xs:token" minOccurs="0"/>
-        <xs:element name="cellular_location" type="xs:token" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type base_source_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Complex Types

cell_source_type, complex_source_type, macromolecule_source_type, organelle_source_type, sample_source_type, tissue_source_type, virus_host_type

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1}

-

Children

details, organism, strain, synonym_organism

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="base_source_type">
-  <xs:sequence>
-    <xs:element name="organism" type="organism_type"/>
-    <xs:element name="strain" type="xs:token" minOccurs="0"/>
-    <xs:element name="synonym_organism" type="xs:token" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-  <xs:attribute name="database">
-    <xs:simpleType>
-      <xs:restriction base="xs:token">
-        <xs:enumeration value="NCBI"/>
-      </xs:restriction>
-    </xs:simpleType>
-  </xs:attribute>
-  <xs:attribute name="synthetically_produced" type="xs:boolean"/>
-</xs:complexType>

-

-

-

-

Complex Type organism_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Used by

-

-

-

- - - - - -

Elements

base_source_type/organism, recombinant_source_type/recombinant_organism

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
ncbi	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="organism_type">
-  <xs:simpleContent>
-    <xs:extension base="xs:token">
-      <xs:attribute name="ncbi" type="xs:positiveInteger"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Complex Type molecular_weight_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

base_macromolecule_type/molecular_weight, complex_supramolecule_type/molecular_weight, organelle_or_cellular_component_supramolecule_type/molecular_weight, sample_supramolecule_type/molecular_weight, virus_supramolecule_type/molecular_weight

-

-

Model

-

-

experimental{0,1} , theoretical{0,1} , method{0,1}

-

Children

experimental, method, theoretical

-

Source

-

-

-

- - - - -

-

<xs:complexType name="molecular_weight_type">
-  <xs:sequence>
-    <xs:element name="experimental" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_assembly_weights">
-            <xs:attribute name="units" use="required">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="MDa"/>
-                  <xs:enumeration value="kDa/nm"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:attribute>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="theoretical" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_assembly_weights">
-            <xs:attribute name="units" use="required">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="MDa"/>
-                  <xs:enumeration value="kDa/nm"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:attribute>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="method" type="xs:token" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type allowed_assembly_weights

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	1000000000.0	- -
minInclusive	0.000000001	- -

-

-

-

Used by

-

-

-

- - - - - -

Elements

molecular_weight_type/experimental, molecular_weight_type/theoretical

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_assembly_weights">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0.000000001"/>
-    <xs:maxInclusive value="1000000000.0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type structure_determination_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

entry_type/structure_determination_list/structure_determination

-

-

Model

-

-

method , aggregation_state , macromolecules_and_complexes{0,1} , specimen_preparation_list , microscopy_list , image_processing+

-

Children

aggregation_state, image_processing, macromolecules_and_complexes, method, microscopy_list, specimen_preparation_list

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
structure_determination_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="structure_determination_type">
-  <xs:sequence>
-    <xs:element name="method">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="singleParticle"/>
-          <xs:enumeration value="subtomogramAveraging"/>
-          <xs:enumeration value="tomography"/>
-          <xs:enumeration value="electronCrystallography"/>
-          <xs:enumeration value="helical"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="aggregation_state">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="particle"/>
-          <xs:enumeration value="filament"/>
-          <xs:enumeration value="twoDArray"/>
-          <xs:enumeration value="threeDArray"/>
-          <xs:enumeration value="helicalArray"/>
-          <xs:enumeration value="cell"/>
-          <xs:enumeration value="tissue"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="macromolecules_and_complexes" type="macromolecules_and_complexes_type" minOccurs="0"/>
-    <xs:element name="specimen_preparation_list">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element ref="specimen_preparation" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="microscopy_list">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element ref="microscopy" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element ref="image_processing" maxOccurs="unbounded"/>
-  </xs:sequence>
-  <xs:attribute name="structure_determination_id" type="xs:positiveInteger" use="required"/>
-</xs:complexType>

-

-

-

-

Complex Type macromolecules_and_complexes_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

structure_determination_type/macromolecules_and_complexes

-

-

Model

-

-

macromolecule_id | complex_id

-

Children

complex_id, macromolecule_id

-

Source

-

-

-

- - - - -

-

<xs:complexType name="macromolecules_and_complexes_type">
-  <xs:choice maxOccurs="unbounded">
-    <xs:element name="macromolecule_id" type="xs:positiveInteger"/>
-    <xs:element name="complex_id" type="xs:nonNegativeInteger"/>
-  </xs:choice>
-</xs:complexType>

-

-

-

-

Complex Type base_preparation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - - - - - -

Element	specimen_preparation
Complex Types	crystallography_preparation_type, helical_preparation_type, single_particle_preparation_type, subtomogram_averaging_preparation_type, tomography_preparation_type

-

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1}

-

Children

buffer, concentration, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="base_preparation_type">
-  <xs:sequence>
-    <xs:element name="concentration" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_concentration">
-            <xs:attribute name="units" use="required">
-              <xs:simpleType>
-                <xs:restriction base="xs:string">
-                  <xs:enumeration value="mg/mL"/>
-                  <xs:enumeration value="mM"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:attribute>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="buffer" type="buffer_type" minOccurs="0"/>
-    <xs:element name="staining" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="type">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:enumeration value="NEGATIVE"/>
-                <xs:enumeration value="NONE"/>
-                <xs:enumeration value="POSITIVE"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-          <xs:element name="material" type="xs:token"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="sugar_embedding" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="material" type="xs:token"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="shadowing" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="material" type="xs:token"/>
-          <xs:element name="angle">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="allowed_angle_shadowing">
-                  <xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="thickness">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="allowed_thickness_shadowing">
-                  <xs:attribute name="units" type="xs:token" fixed="nm" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="grid" type="grid_type" minOccurs="0"/>
-    <xs:element name="vitrification" type="vitrification_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-  <xs:attribute name="preparation_id" type="xs:positiveInteger" use="required"/>
-</xs:complexType>

-

-

-

-

Simple Type allowed_concentration

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minExclusive

0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Elements

base_preparation_type/concentration, buffer_component_type/concentration

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_concentration">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type buffer_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

base_preparation_type/buffer

-

-

Model

-

-

ph , component* , details{0,1}

-

Children

component, details, ph

-

Source

-

-

-

- - - - -

-

<xs:complexType name="buffer_type">
-  <xs:sequence>
-    <xs:element name="ph">
-      <xs:simpleType>
-        <xs:restriction base="xs:float">
-          <xs:minInclusive value="0"/>
-          <xs:maxInclusive value="14"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="component" type="buffer_component_type" minOccurs="0" maxOccurs="unbounded"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type buffer_component_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

buffer_type/component

-

-

Model

-

-

concentration{0,1} , formula{0,1} , name{0,1}

-

Children

concentration, formula, name

-

Source

-

-

-

- - - - -

-

<xs:complexType name="buffer_component_type">
-  <xs:sequence>
-    <xs:element name="concentration" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_concentration">
-            <xs:attribute name="units" type="xs:token" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="formula" type="formula_type" minOccurs="0"/>
-    <xs:element name="name" type="xs:token" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type formula_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:token

-

Used by

-

-

-

- - - - - -

Elements

buffer_component_type/formula, em_label_macromolecule_type/formula, ligand_macromolecule_type/formula, saccharide_macromolecule_type/formula

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="formula_type">
-  <xs:restriction base="xs:token"/>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_angle_shadowing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	90	- -
minInclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_preparation_type/shadowing/angle

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_angle_shadowing">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0"/>
-    <xs:maxInclusive value="90"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_thickness_shadowing

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	30	- -
minInclusive	0.1	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_preparation_type/shadowing/thickness

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_thickness_shadowing">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0.1"/>
-    <xs:maxInclusive value="30"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type grid_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

base_preparation_type/grid

-

-

Model

-

-

model{0,1} , material{0,1} , mesh{0,1} , support_film* , pretreatment{0,1} , details{0,1}

-

Children

details, material, mesh, model, pretreatment, support_film

-

Source

-

-

-

- - - - -

-

<xs:complexType name="grid_type">
-  <xs:sequence>
-    <xs:element name="model" type="xs:token" minOccurs="0"/>
-    <xs:element name="material" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="COPPER"/>
-          <xs:enumeration value="COPPER/PALLADIUM"/>
-          <xs:enumeration value="COPPER/RHODIUM"/>
-          <xs:enumeration value="GOLD"/>
-          <xs:enumeration value="GRAPHENE OXIDE"/>
-          <xs:enumeration value="MOLYBDENUM"/>
-          <xs:enumeration value="NICKEL"/>
-          <xs:enumeration value="NICKEL/TITANIUM"/>
-          <xs:enumeration value="PLATINUM"/>
-          <xs:enumeration value="SILICON NITRIDE"/>
-          <xs:enumeration value="TITANIUM"/>
-          <xs:enumeration value="TUNGSTEN"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="mesh" type="xs:positiveInteger" minOccurs="0"/>
-    <xs:element name="support_film" type="film_type" minOccurs="0" maxOccurs="unbounded"/>
-    <xs:element name="pretreatment" type="grid_pretreatment_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type film_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

grid_type/support_film

-

-

Model

-

-

film_material{0,1} , film_topology{0,1} , film_thickness{0,1}

-

Children

film_material, film_thickness, film_topology

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
film_type_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="film_type">
-  <xs:sequence>
-    <xs:element name="film_material" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="CARBON"/>
-          <xs:enumeration value="CELLULOSE ACETATE"/>
-          <xs:enumeration value="FORMVAR"/>
-          <xs:enumeration value="GOLD"/>
-          <xs:enumeration value="GRAPHENE"/>
-          <xs:enumeration value="GRAPHENE OXIDE"/>
-          <xs:enumeration value="PARLODION"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="film_topology" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="CONTINUOUS"/>
-          <xs:enumeration value="HOLEY"/>
-          <xs:enumeration value="HOLEY ARRAY"/>
-          <xs:enumeration value="LACEY"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="film_thickness" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_film_thickness">
-            <xs:attribute name="units" type="xs:token" fixed="nm"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-  </xs:sequence>
-  <xs:attribute name="film_type_id" type="xs:positiveInteger" use="required"/>
-</xs:complexType>

-

-

-

-

Simple Type allowed_film_thickness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minInclusive

0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

film_type/film_thickness

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_film_thickness">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type grid_pretreatment_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

grid_type/pretreatment

-

-

Model

-

-

type{0,1} , time{0,1} , atmosphere{0,1} , pressure{0,1}

-

Children

atmosphere, pressure, time, type

-

Source

-

-

-

- - - - -

-

<xs:complexType name="grid_pretreatment_type">
-  <xs:sequence>
-    <xs:element name="type" type="xs:token" minOccurs="0"/>
-    <xs:element name="time" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_time_glow_discharge">
-            <xs:attribute name="units" type="xs:token" fixed="s" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="atmosphere" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="AIR"/>
-          <xs:enumeration value="AMYLAMINE"/>
-          <xs:enumeration value="NITROGEN"/>
-          <xs:enumeration value="OTHER"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="pressure" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_pressure_glow_discharge">
-            <xs:attribute name="units" type="xs:token" fixed="kPa" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type allowed_time_glow_discharge

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:positiveInteger

-

Facets

-

-

-

- - - - - - -

maxInclusive

300

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

grid_pretreatment_type/time

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_time_glow_discharge">
-  <xs:restriction base="xs:positiveInteger">
-    <xs:maxInclusive value="300"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_pressure_glow_discharge

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minInclusive

0.0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

grid_pretreatment_type/pressure

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_pressure_glow_discharge">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0.0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type vitrification_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

base_preparation_type/vitrification

-

-

Model

-

-

cryogen_name , chamber_humidity{0,1} , chamber_temperature{0,1} , instrument{0,1} , details{0,1} , timed_resolved_state{0,1} , method{0,1}

-

Children

chamber_humidity, chamber_temperature, cryogen_name, details, instrument, method, timed_resolved_state

-

Source

-

-

-

- - - - -

-

<xs:complexType name="vitrification_type">
-  <xs:sequence>
-    <xs:element name="cryogen_name">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="ETHANE"/>
-          <xs:enumeration value="ETHANE-PROPANE"/>
-          <xs:enumeration value="FREON 12"/>
-          <xs:enumeration value="FREON 22"/>
-          <xs:enumeration value="HELIUM"/>
-          <xs:enumeration value="METHANE"/>
-          <xs:enumeration value="NITROGEN"/>
-          <xs:enumeration value="OTHER"/>
-          <xs:enumeration value="PROPANE"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="chamber_humidity" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_humidity_vitrification">
-            <xs:attribute name="units" type="xs:token" fixed="percentage" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="chamber_temperature" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_temperature_vitrification">
-            <xs:attribute name="units" type="xs:token" fixed="K" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="instrument" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="EMS-002 RAPID IMMERSION FREEZER"/>
-          <xs:enumeration value="FEI VITROBOT MARK I"/>
-          <xs:enumeration value="FEI VITROBOT MARK II"/>
-          <xs:enumeration value="FEI VITROBOT MARK III"/>
-          <xs:enumeration value="FEI VITROBOT MARK IV"/>
-          <xs:enumeration value="GATAN CRYOPLUNGE 3"/>
-          <xs:enumeration value="HOMEMADE PLUNGER"/>
-          <xs:enumeration value="LEICA EM CPC"/>
-          <xs:enumeration value="LEICA EM GP"/>
-          <xs:enumeration value="LEICA KF80"/>
-          <xs:enumeration value="LEICA PLUNGER"/>
-          <xs:enumeration value="REICHERT-JUNG PLUNGER"/>
-          <xs:enumeration value="SPOTITON"/>
-          <xs:enumeration value="OTHER"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-    <xs:element name="timed_resolved_state" type="xs:token" minOccurs="0"/>
-    <xs:element name="method" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type allowed_humidity_vitrification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	100	- -
minInclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

vitrification_type/chamber_humidity

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_humidity_vitrification">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0"/>
-    <xs:maxInclusive value="100"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_temperature_vitrification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Used by

-

-

-

- - - - - -

Element

vitrification_type/chamber_temperature

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_temperature_vitrification">
-  <xs:restriction base="xs:float"/>
-</xs:simpleType>

-

-

-

-

Complex Type base_microscopy_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - - - - - -

Element	microscopy
Complex Types	crystallography_microscopy_type, helical_microscopy_type, single_particle_microscopy_type, tomography_microscopy_type

-

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1}

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="base_microscopy_type">
-  <xs:sequence>
-    <xs:element name="specimen_preparations" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence maxOccurs="unbounded">
-          <xs:element name="specimen_preparation_id" type="xs:positiveInteger"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="microscope">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="FEI MORGAGNI"/>
-          <xs:enumeration value="FEI POLARA 300"/>
-          <xs:enumeration value="FEI TALOS ARCTICA"/>
-          <xs:enumeration value="FEI TECNAI 10"/>
-          <xs:enumeration value="FEI TECNAI 12"/>
-          <xs:enumeration value="FEI TECNAI 20"/>
-          <xs:enumeration value="FEI TECNAI ARCTICA"/>
-          <xs:enumeration value="FEI TECNAI F20"/>
-          <xs:enumeration value="FEI TECNAI F30"/>
-          <xs:enumeration value="FEI TECNAI SPHERA"/>
-          <xs:enumeration value="FEI TECNAI SPIRIT"/>
-          <xs:enumeration value="FEI TITAN"/>
-          <xs:enumeration value="FEI TITAN KRIOS"/>
-          <xs:enumeration value="FEI/PHILIPS CM10"/>
-          <xs:enumeration value="FEI/PHILIPS CM12"/>
-          <xs:enumeration value="FEI/PHILIPS CM120T"/>
-          <xs:enumeration value="FEI/PHILIPS CM200FEG"/>
-          <xs:enumeration value="FEI/PHILIPS CM200FEG/SOPHIE"/>
-          <xs:enumeration value="FEI/PHILIPS CM200FEG/ST"/>
-          <xs:enumeration value="FEI/PHILIPS CM200FEG/UT"/>
-          <xs:enumeration value="FEI/PHILIPS CM200T"/>
-          <xs:enumeration value="FEI/PHILIPS CM300FEG/HE"/>
-          <xs:enumeration value="FEI/PHILIPS CM300FEG/ST"/>
-          <xs:enumeration value="FEI/PHILIPS CM300FEG/T"/>
-          <xs:enumeration value="FEI/PHILIPS EM400"/>
-          <xs:enumeration value="FEI/PHILIPS EM420"/>
-          <xs:enumeration value="HITACHI EF2000"/>
-          <xs:enumeration value="HITACHI H-9500SD"/>
-          <xs:enumeration value="HITACHI H3000 UHVEM"/>
-          <xs:enumeration value="HITACHI H7600"/>
-          <xs:enumeration value="HITACHI HF2000"/>
-          <xs:enumeration value="HITACHI HF3000"/>
-          <xs:enumeration value="JEOL 100CX"/>
-          <xs:enumeration value="JEOL 1000EES"/>
-          <xs:enumeration value="JEOL 1010"/>
-          <xs:enumeration value="JEOL 1200"/>
-          <xs:enumeration value="JEOL 1200EX"/>
-          <xs:enumeration value="JEOL 1200EXII"/>
-          <xs:enumeration value="JEOL 1230"/>
-          <xs:enumeration value="JEOL 1400"/>
-          <xs:enumeration value="JEOL 1400/HR + YPS FEG"/>
-          <xs:enumeration value="JEOL 2000EX"/>
-          <xs:enumeration value="JEOL 2000EXII"/>
-          <xs:enumeration value="JEOL 2010"/>
-          <xs:enumeration value="JEOL 2010F"/>
-          <xs:enumeration value="JEOL 2010HC"/>
-          <xs:enumeration value="JEOL 2010HT"/>
-          <xs:enumeration value="JEOL 2010UHR"/>
-          <xs:enumeration value="JEOL 2011"/>
-          <xs:enumeration value="JEOL 2100"/>
-          <xs:enumeration value="JEOL 2100F"/>
-          <xs:enumeration value="JEOL 2200FS"/>
-          <xs:enumeration value="JEOL 2200FSC"/>
-          <xs:enumeration value="JEOL 3000SFF"/>
-          <xs:enumeration value="JEOL 3100FEF"/>
-          <xs:enumeration value="JEOL 3100FFC"/>
-          <xs:enumeration value="JEOL 3200FS"/>
-          <xs:enumeration value="JEOL 3200FSC"/>
-          <xs:enumeration value="JEOL 4000"/>
-          <xs:enumeration value="JEOL 4000EX"/>
-          <xs:enumeration value="JEOL CRYO ARM 200"/>
-          <xs:enumeration value="JEOL CRYO ARM 300"/>
-          <xs:enumeration value="JEOL KYOTO-3000SFF"/>
-          <xs:enumeration value="TFS GLACIOS"/>
-          <xs:enumeration value="TFS KRIOS"/>
-          <xs:enumeration value="TFS TALOS"/>
-          <xs:enumeration value="TFS TALOS L120C"/>
-          <xs:enumeration value="TFS TALOS F200C"/>
-          <xs:enumeration value="TFS TITAN THEMIS"/>
-          <xs:enumeration value="TFS TUNDRA"/>
-          <xs:enumeration value="ZEISS LEO912"/>
-          <xs:enumeration value="ZEISS LIBRA120PLUS"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="illumination_mode">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="FLOOD BEAM"/>
-          <xs:enumeration value="SPOT SCAN"/>
-          <xs:enumeration value="OTHER"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="imaging_mode">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="4D-STEM"/>
-          <xs:enumeration value="BRIGHT FIELD"/>
-          <xs:enumeration value="DARK FIELD"/>
-          <xs:enumeration value="DIFFRACTION"/>
-          <xs:enumeration value="OTHER"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="electron_source">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="TUNGSTEN HAIRPIN"/>
-          <xs:enumeration value="LAB6"/>
-          <xs:enumeration value="OTHER"/>
-          <xs:enumeration value="FIELD EMISSION GUN"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="acceleration_voltage">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_acceleration_voltage">
-            <xs:attribute name="units" type="xs:token" fixed="kV" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="c2_aperture_diameter" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_c2_aperture_diameter">
-            <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="nominal_cs" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_nominal_cs">
-            <xs:attribute name="units" type="xs:token" fixed="mm" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="nominal_defocus_min" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_defocus_min">
-            <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="calibrated_defocus_min" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_defocus_min">
-            <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="nominal_defocus_max" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_defocus_max">
-            <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="calibrated_defocus_max" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_defocus_max">
-            <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="nominal_magnification" type="allowed_magnification" minOccurs="0"/>
-    <xs:element name="calibrated_magnification" type="allowed_magnification" minOccurs="0"/>
-    <xs:element name="specimen_holder_model" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="FISCHIONE 2550"/>
-          <xs:enumeration value="FISCHIONE INSTRUMENTS DUAL AXIS TOMOGRAPHY HOLDER"/>
-          <xs:enumeration value="FEI TITAN KRIOS AUTOGRID HOLDER"/>
-          <xs:enumeration value="GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-          <xs:enumeration value="GATAN 910 MULTI-SPECIMEN SINGLE TILT CRYO TRANSFER HOLDER"/>
-          <xs:enumeration value="GATAN 914 HIGH TILT LIQUID NITROGEN CRYO TRANSFER TOMOGRAPHY HOLDER"/>
-          <xs:enumeration value="GATAN 915 DOUBLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-          <xs:enumeration value="GATAN CHDT 3504 DOUBLE TILT HIGH RESOLUTION NITROGEN COOLING HOLDER"/>
-          <xs:enumeration value="GATAN CT3500 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-          <xs:enumeration value="GATAN CT3500TR SINGLE TILT ROTATION LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-          <xs:enumeration value="GATAN ELSA 698 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER"/>
-          <xs:enumeration value="GATAN HC 3500 SINGLE TILT HEATING/NITROGEN COOLING HOLDER"/>
-          <xs:enumeration value="GATAN HCHDT 3010 DOUBLE TILT HIGH RESOLUTION HELIUM COOLING HOLDER"/>
-          <xs:enumeration value="GATAN HCHST 3008 SINGLE TILT HIGH RESOLUTION HELIUM COOLING HOLDER"/>
-          <xs:enumeration value="GATAN HELIUM"/>
-          <xs:enumeration value="GATAN LIQUID NITROGEN"/>
-          <xs:enumeration value="GATAN UHRST 3500 SINGLE TILT ULTRA HIGH RESOLUTION NITROGEN COOLING HOLDER"/>
-          <xs:enumeration value="GATAN ULTDT ULTRA LOW TEMPERATURE DOUBLE TILT HELIUM COOLING HOLDER"/>
-          <xs:enumeration value="GATAN ULTST ULTRA LOW TEMPERATURE SINGLE TILT HELIUM COOLING HOLDER"/>
-          <xs:enumeration value="HOME BUILD"/>
-          <xs:enumeration value="JEOL"/>
-          <xs:enumeration value="JEOL 3200FSC CRYOHOLDER"/>
-          <xs:enumeration value="OTHER"/>
-          <xs:enumeration value="PHILIPS ROTATION HOLDER"/>
-          <xs:enumeration value="SIDE ENTRY, EUCENTRIC"/>
-          <xs:enumeration value="JEOL CRYOSPECPORTER"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="cooling_holder_cryogen" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="HELIUM"/>
-          <xs:enumeration value="NITROGEN"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="temperature" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="temperature_min" type="temperature_type" minOccurs="0"/>
-          <xs:element name="temperature_max" type="temperature_type" minOccurs="0"/>
-          <xs:element name="temperature_average" type="temperature_type" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="alignment_procedure" minOccurs="0">
-      <xs:complexType>
-        <xs:choice>
-          <xs:element name="none">
-            <xs:complexType/>
-          </xs:element>
-          <xs:element name="basic">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element name="residual_tilt" type="residual_tilt_type" minOccurs="0"/>
-              </xs:sequence>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="zemlin_tableau">
-            <xs:complexType/>
-          </xs:element>
-          <xs:element name="coma_free">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element name="residual_tilt" type="residual_tilt_type" minOccurs="0"/>
-              </xs:sequence>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="other">
-            <xs:complexType/>
-          </xs:element>
-          <xs:element name="legacy">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element name="astigmatism" type="xs:string"/>
-                <xs:element name="electron_beam_tilt_params" type="xs:string"/>
-              </xs:sequence>
-            </xs:complexType>
-          </xs:element>
-        </xs:choice>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="specialist_optics" type="specialist_optics_type" minOccurs="0"/>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-    <xs:element name="date" type="xs:date" minOccurs="0"/>
-    <xs:element name="image_recording_list">
-      <xs:complexType>
-        <xs:sequence maxOccurs="unbounded">
-          <xs:element name="image_recording">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element name="film_or_detector_model">
-                  <xs:complexType>
-                    <xs:simpleContent>
-                      <xs:extension base="allowed_film_or_detector_model">
-                        <xs:attribute name="category">
-                          <xs:simpleType>
-                            <xs:restriction base="xs:string">
-                              <xs:enumeration value="CCD"/>
-                              <xs:enumeration value="CMOS"/>
-                              <xs:enumeration value="DIRECT ELECTRON DETECTOR"/>
-                              <xs:enumeration value="STORAGE PHOSPOR (IMAGE PLATES)"/>
-                              <xs:enumeration value="FILM"/>
-                            </xs:restriction>
-                          </xs:simpleType>
-                        </xs:attribute>
-                      </xs:extension>
-                    </xs:simpleContent>
-                  </xs:complexType>
-                </xs:element>
-                <xs:element name="detector_mode" minOccurs="0">
-                  <xs:simpleType>
-                    <xs:restriction base="xs:token">
-                      <xs:enumeration value="COUNTING"/>
-                      <xs:enumeration value="INTEGRATING"/>
-                      <xs:enumeration value="OTHER"/>
-                      <xs:enumeration value="SUPER-RESOLUTION"/>
-                    </xs:restriction>
-                  </xs:simpleType>
-                </xs:element>
-                <xs:element name="digitization_details" minOccurs="0">
-                  <xs:complexType>
-                    <xs:sequence>
-                      <xs:element name="scanner" minOccurs="0">
-                        <xs:simpleType>
-                          <xs:restriction base="xs:token">
-                            <xs:enumeration value="EIKONIX IEEE 488"/>
-                            <xs:enumeration value="EMIL 10"/>
-                            <xs:enumeration value="IMACON"/>
-                            <xs:enumeration value="NIKON COOLSCAN"/>
-                            <xs:enumeration value="NIKON SUPER COOLSCAN 9000"/>
-                            <xs:enumeration value="OPTRONICS"/>
-                            <xs:enumeration value="OTHER"/>
-                            <xs:enumeration value="PATCHWORK DENSITOMETER"/>
-                            <xs:enumeration value="PERKIN ELMER"/>
-                            <xs:enumeration value="PRIMESCAN"/>
-                            <xs:enumeration value="TEMSCAN"/>
-                            <xs:enumeration value="ZEISS SCAI"/>
-                          </xs:restriction>
-                        </xs:simpleType>
-                      </xs:element>
-                      <xs:element name="dimensions" minOccurs="0">
-                        <xs:complexType>
-                          <xs:sequence>
-                            <xs:element name="width" minOccurs="0">
-                              <xs:complexType>
-                                <xs:simpleContent>
-                                  <xs:extension base="xs:positiveInteger">
-                                    <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-                                  </xs:extension>
-                                </xs:simpleContent>
-                              </xs:complexType>
-                            </xs:element>
-                            <xs:element name="height" minOccurs="0">
-                              <xs:complexType>
-                                <xs:simpleContent>
-                                  <xs:extension base="xs:positiveInteger">
-                                    <xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>
-                                  </xs:extension>
-                                </xs:simpleContent>
-                              </xs:complexType>
-                            </xs:element>
-                          </xs:sequence>
-                        </xs:complexType>
-                      </xs:element>
-                      <xs:element name="sampling_interval" minOccurs="0">
-                        <xs:complexType>
-                          <xs:simpleContent>
-                            <xs:extension base="allowed_scaning_interval">
-                              <xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>
-                            </xs:extension>
-                          </xs:simpleContent>
-                        </xs:complexType>
-                      </xs:element>
-                      <xs:element name="frames_per_image" type="xs:token" minOccurs="0"/>
-                    </xs:sequence>
-                  </xs:complexType>
-                </xs:element>
-                <xs:element name="number_grids_imaged" type="xs:positiveInteger" minOccurs="0"/>
-                <xs:element name="number_real_images" type="xs:positiveInteger" minOccurs="0"/>
-                <xs:element name="number_diffraction_images" type="xs:positiveInteger" minOccurs="0"/>
-                <xs:element name="average_exposure_time" minOccurs="0">
-                  <xs:complexType>
-                    <xs:simpleContent>
-                      <xs:extension base="allowed_average_exposure_time_type">
-                        <xs:attribute name="units" type="xs:token" fixed="s" use="required"/>
-                      </xs:extension>
-                    </xs:simpleContent>
-                  </xs:complexType>
-                </xs:element>
-                <xs:element name="average_electron_dose_per_image" minOccurs="0">
-                  <xs:complexType>
-                    <xs:simpleContent>
-                      <xs:extension base="allowed_electron_dose">
-                        <xs:attribute name="units" type="xs:token" fixed="e/Å^2" use="required"/>
-                      </xs:extension>
-                    </xs:simpleContent>
-                  </xs:complexType>
-                </xs:element>
-                <xs:element name="detector_distance" type="xs:string" minOccurs="0"/>
-                <xs:element name="details" type="xs:string" minOccurs="0"/>
-                <xs:element name="od_range" type="xs:float" minOccurs="0"/>
-                <xs:element name="bits_per_pixel" type="xs:float" minOccurs="0"/>
-              </xs:sequence>
-              <xs:attribute name="image_recording_id" type="xs:positiveInteger"/>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="specimen_holder" type="xs:string" minOccurs="0"/>
-    <xs:element name="tilt_angle_min" type="xs:string" minOccurs="0"/>
-    <xs:element name="tilt_angle_max" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-  <xs:attribute name="microscopy_id" type="xs:positiveInteger" use="required"/>
-</xs:complexType>

-

-

-

-

Simple Type allowed_acceleration_voltage

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:positiveInteger

-

Facets

-

-

-

- - - - - - -

minInclusive

25

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/acceleration_voltage

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_acceleration_voltage">
-  <xs:restriction base="xs:positiveInteger">
-    <xs:minInclusive value="25"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_c2_aperture_diameter

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	150	- -
minInclusive	2	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/c2_aperture_diameter

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_c2_aperture_diameter">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="2"/>
-    <xs:maxInclusive value="150"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_nominal_cs

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	20	- -
minInclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/nominal_cs

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_nominal_cs">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0"/>
-    <xs:maxInclusive value="20"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_defocus_min

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	20	- -
minInclusive	-20	- -

-

-

-

Used by

-

-

-

- - - - - -

Elements

base_microscopy_type/calibrated_defocus_min, base_microscopy_type/nominal_defocus_min

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_defocus_min">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="-20"/>
-    <xs:maxInclusive value="20"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_defocus_max

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	50	- -
minInclusive	-30	- -

-

-

-

Used by

-

-

-

- - - - - -

Elements

base_microscopy_type/calibrated_defocus_max, base_microscopy_type/nominal_defocus_max

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_defocus_max">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="-30"/>
-    <xs:maxInclusive value="50"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_magnification

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	500000	- -
minInclusive	1000	- -

-

-

-

Used by

-

-

-

- - - - - -

Elements

base_microscopy_type/calibrated_magnification, base_microscopy_type/nominal_magnification

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_magnification">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="1000"/>
-    <xs:maxInclusive value="500000"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type temperature_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_temperature

Type hierarchy

-

xs:float
- allowed_temperature
  - temperature_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Elements

base_microscopy_type/temperature/temperature_average, base_microscopy_type/temperature/temperature_max, base_microscopy_type/temperature/temperature_min, tomography_preparation_type/sectioning/focused_ion_beam/temperature, tomography_preparation_type/sectioning/ultramicrotomy/temperature

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	K	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="temperature_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_temperature">
-      <xs:attribute name="units" type="xs:token" fixed="K" use="required"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_temperature

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	310	- -
minExclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

temperature_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_temperature">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-    <xs:maxInclusive value="310"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type residual_tilt_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:float

-

Used by

-

-

-

- - - - - -

Elements

base_microscopy_type/alignment_procedure/basic/residual_tilt, base_microscopy_type/alignment_procedure/coma_free/residual_tilt

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	mrad	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="residual_tilt_type">
-  <xs:simpleContent>
-    <xs:extension base="xs:float">
-      <xs:attribute name="units" type="xs:token" fixed="mrad" use="required"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Complex Type specialist_optics_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/specialist_optics

-

-

Model

-

-

phase_plate{0,1} , sph_aberration_corrector{0,1} , chr_aberration_corrector{0,1} , energy_filter{0,1} , details{0,1}

-

Children

chr_aberration_corrector, details, energy_filter, phase_plate, sph_aberration_corrector

-

Source

-

-

-

- - - - -

-

<xs:complexType name="specialist_optics_type">
-  <xs:sequence>
-    <xs:element name="phase_plate" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="ZERNIKE PHASE PLATE"/>
-          <xs:enumeration value="VOLTA PHASE PLATE"/>
-          <xs:enumeration value="OTHER"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="sph_aberration_corrector" type="xs:token" minOccurs="0"/>
-    <xs:element name="chr_aberration_corrector" type="xs:token" minOccurs="0"/>
-    <xs:element name="energy_filter" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="name" type="xs:token" minOccurs="0"/>
-          <xs:element name="slit_width" minOccurs="0">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="allowed_energy_filter_width">
-                  <xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="lower_energy_threshold" minOccurs="0">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="allowed_energy_window">
-                  <xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="upper_energy_threshold" minOccurs="0">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="allowed_energy_window">
-                  <xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type allowed_energy_filter_width

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	1000	- -
minInclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

specialist_optics_type/energy_filter/slit_width

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_energy_filter_width">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0"/>
-    <xs:maxInclusive value="1000"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_energy_window

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	500	- -
minInclusive	-500	- -

-

-

-

Used by

-

-

-

- - - - - -

Elements

specialist_optics_type/energy_filter/lower_energy_threshold, specialist_optics_type/energy_filter/upper_energy_threshold

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_energy_window">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="-500"/>
-    <xs:maxInclusive value="500"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type software_list_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

angle_assignment_type/software_list, background_masked_type/software_list, base_microscopy_type/software_list, classification_type/software_list, crystallography_proc_add_group/lattice_distortion_correction_software_list, crystallography_proc_add_group/merging_software_list, crystallography_proc_add_group/symmetry_determination_software_list, ctf_correction_type/software_list, final_reconstruction_type/software_list, layer_lines_type/helix_length/software_list, layer_lines_type/indexing/software_list, modelling_type/software_list, molecular_replacement_type/software_list, particle_selection_type/software_list, reconstruction_filtering_type/b-factorSharpening/software_list, reconstruction_filtering_type/other/software_list, reconstruction_filtering_type/sharpening/software_list, reconstruction_filtering_type/spatial_filtering/software_list, refinement_type/software_list, segment_selection_type/software_list, single_particle_proc_add_group/final_multi_reference_alignment/software_list, starting_map_type/orthogonal_tilt/software_list, starting_map_type/random_conical_tilt/software_list, subtomogram_averaging_proc_add_group/extraction/software_list, subtomogram_averaging_proc_add_group/final_multi_reference_alignment/software_list, tomography_proc_add_group/series_aligment_software_list

-

-

Model

-

-

software*

-

Children

software

-

Source

-

-

-

- - - - -

-

<xs:complexType name="software_list_type">
-  <xs:sequence>
-    <xs:element name="software" type="software_type" minOccurs="0" maxOccurs="unbounded"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type software_type

- - - - - - - - - - - - - - - - -

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Namespace

No namespace

-

Diagram

-

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Diagram

-

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Used by

-

-

-

- - - - - -

Element

software_list_type/software

-

-

Model

-

-

name{0,1} , version{0,1} , processing_details{0,1}

-

Children

name, processing_details, version

-

Source

-

-

-

- - - - -

-

<xs:complexType name="software_type">
-  <xs:sequence>
-    <xs:element name="name" type="xs:token" minOccurs="0"/>
-    <xs:element name="version" type="xs:token" minOccurs="0"/>
-    <xs:element name="processing_details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type allowed_film_or_detector_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	AGFA SCIENTA FILM	- -
enumeration	DECTRIS SINGLA (1k x 1k)	- -
enumeration	DECTRIS ELA (1k x 0.5k)	- -
enumeration	DECTRIS ARINA (0.2k x 0.2k)	- -
enumeration	DIRECT ELECTRON APOLLO (4k x 4k)	- -
enumeration	DIRECT ELECTRON DE-10 (5k x 4k)	- -
enumeration	DIRECT ELECTRON DE-12 (4k x 3k)	- -
enumeration	DIRECT ELECTRON DE-16 (4k x 4k)	- -
enumeration	DIRECT ELECTRON DE-20 (5k x 3k)	- -
enumeration	DIRECT ELECTRON DE-64 (8k x 8k)	- -
enumeration	FEI CETA (4k x 4k)	- -
enumeration	FEI EAGLE (2k x 2k)	- -
enumeration	FEI EAGLE (4k x 4k)	- -
enumeration	FEI FALCON I (4k x 4k)	- -
enumeration	FEI FALCON II (4k x 4k)	- -
enumeration	FEI FALCON III (4k x 4k)	- -
enumeration	FEI FALCON IV (4k x 4k)	- -
enumeration	GATAN ALPINE (2.3k x 3.2k)	- -
enumeration	GATAN K2 (4k x 4k)	- -
enumeration	GATAN K2 BASE (4k x 4k)	- -
enumeration	GATAN K2 IS (4k x 4k)	- -
enumeration	GATAN K2 QUANTUM (4k x 4k)	- -
enumeration	GATAN K2 SUMMIT (4k x 4k)	- -
enumeration	GATAN K3 (6k x 4k)	- -
enumeration	GATAN K3 BIOCONTINUUM (6k x 4k)	- -
enumeration	GATAN K3 BIOQUANTUM (6k x 4k)	- -
enumeration	GATAN MULTISCAN	- -
enumeration	GATAN ORIUS SC1000 (4k x 2.7k)	- -
enumeration	GATAN ORIUS SC200 (2k x 2k)	- -
enumeration	GATAN ORIUS SC600 (2.7k x 2.7k)	- -
enumeration	GATAN ULTRASCAN 1000 (2k x 2k)	- -
enumeration	GATAN ULTRASCAN 10000 (10k x 10k)	- -
enumeration	GATAN ULTRASCAN 4000 (4k x 4k)	- -
enumeration	GENERIC CCD	- -
enumeration	GENERIC CCD (2k x 2k)	- -
enumeration	GENERIC CCD (4k x 4k)	- -
enumeration	GENERIC FILM	- -
enumeration	GENERIC GATAN	- -
enumeration	GENERIC GATAN (2k x 2k)	- -
enumeration	GENERIC GATAN (4k x 4k)	- -
enumeration	GENERIC IMAGE PLATES	- -
enumeration	GENERIC TVIPS	- -
enumeration	GENERIC TVIPS (2k x 2k)	- -
enumeration	GENERIC TVIPS (4k x 4k)	- -
enumeration	KODAK 4489 FILM	- -
enumeration	KODAK SO-163 FILM	- -
enumeration	OTHER	- -
enumeration	PROSCAN TEM-PIV (2k x 2k)	- -
enumeration	SIA 15C (3k x 3k)	- -
enumeration	TFS FALCON 4i (4k x 4k)	- -
enumeration	TVIPS TEMCAM-F216 (2k x 2k)	- -
enumeration	TVIPS TEMCAM-F224 (2k x 2k)	- -
enumeration	TVIPS TEMCAM-F415 (4k x 4k)	- -
enumeration	TVIPS TEMCAM-F416 (4k x 4k)	- -
enumeration	TVIPS TEMCAM-F816 (8k x 8k)	- -

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Used by

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-

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Element

base_microscopy_type/image_recording_list/image_recording/film_or_detector_model

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-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_film_or_detector_model">
-  <xs:restriction base="xs:token">
-    <xs:enumeration value="AGFA SCIENTA FILM"/>
-    <xs:enumeration value="DECTRIS SINGLA (1k x 1k)"/>
-    <xs:enumeration value="DECTRIS ELA (1k x 0.5k)"/>
-    <xs:enumeration value="DECTRIS ARINA (0.2k x 0.2k)"/>
-    <xs:enumeration value="DIRECT ELECTRON APOLLO (4k x 4k)"/>
-    <xs:enumeration value="DIRECT ELECTRON DE-10 (5k x 4k)"/>
-    <xs:enumeration value="DIRECT ELECTRON DE-12 (4k x 3k)"/>
-    <xs:enumeration value="DIRECT ELECTRON DE-16 (4k x 4k)"/>
-    <xs:enumeration value="DIRECT ELECTRON DE-20 (5k x 3k)"/>
-    <xs:enumeration value="DIRECT ELECTRON DE-64 (8k x 8k)"/>
-    <xs:enumeration value="FEI CETA (4k x 4k)"/>
-    <xs:enumeration value="FEI EAGLE (2k x 2k)"/>
-    <xs:enumeration value="FEI EAGLE (4k x 4k)"/>
-    <xs:enumeration value="FEI FALCON I (4k x 4k)"/>
-    <xs:enumeration value="FEI FALCON II (4k x 4k)"/>
-    <xs:enumeration value="FEI FALCON III (4k x 4k)"/>
-    <xs:enumeration value="FEI FALCON IV (4k x 4k)"/>
-    <xs:enumeration value="GATAN ALPINE (2.3k x 3.2k)"/>
-    <xs:enumeration value="GATAN K2 (4k x 4k)"/>
-    <xs:enumeration value="GATAN K2 BASE (4k x 4k)"/>
-    <xs:enumeration value="GATAN K2 IS (4k x 4k)"/>
-    <xs:enumeration value="GATAN K2 QUANTUM (4k x 4k)"/>
-    <xs:enumeration value="GATAN K2 SUMMIT (4k x 4k)"/>
-    <xs:enumeration value="GATAN K3 (6k x 4k)"/>
-    <xs:enumeration value="GATAN K3 BIOCONTINUUM (6k x 4k)"/>
-    <xs:enumeration value="GATAN K3 BIOQUANTUM (6k x 4k)"/>
-    <xs:enumeration value="GATAN MULTISCAN"/>
-    <xs:enumeration value="GATAN ORIUS SC1000 (4k x 2.7k)"/>
-    <xs:enumeration value="GATAN ORIUS SC200 (2k x 2k)"/>
-    <xs:enumeration value="GATAN ORIUS SC600 (2.7k x 2.7k)"/>
-    <xs:enumeration value="GATAN ULTRASCAN 1000 (2k x 2k)"/>
-    <xs:enumeration value="GATAN ULTRASCAN 10000 (10k x 10k)"/>
-    <xs:enumeration value="GATAN ULTRASCAN 4000 (4k x 4k)"/>
-    <xs:enumeration value="GENERIC CCD"/>
-    <xs:enumeration value="GENERIC CCD (2k x 2k)"/>
-    <xs:enumeration value="GENERIC CCD (4k x 4k)"/>
-    <xs:enumeration value="GENERIC FILM"/>
-    <xs:enumeration value="GENERIC GATAN"/>
-    <xs:enumeration value="GENERIC GATAN (2k x 2k)"/>
-    <xs:enumeration value="GENERIC GATAN (4k x 4k)"/>
-    <xs:enumeration value="GENERIC IMAGE PLATES"/>
-    <xs:enumeration value="GENERIC TVIPS"/>
-    <xs:enumeration value="GENERIC TVIPS (2k x 2k)"/>
-    <xs:enumeration value="GENERIC TVIPS (4k x 4k)"/>
-    <xs:enumeration value="KODAK 4489 FILM"/>
-    <xs:enumeration value="KODAK SO-163 FILM"/>
-    <xs:enumeration value="OTHER"/>
-    <xs:enumeration value="PROSCAN TEM-PIV (2k x 2k)"/>
-    <xs:enumeration value="SIA 15C (3k x 3k)"/>
-    <xs:enumeration value="TFS FALCON 4i (4k x 4k)"/>
-    <xs:enumeration value="TVIPS TEMCAM-F216 (2k x 2k)"/>
-    <xs:enumeration value="TVIPS TEMCAM-F224 (2k x 2k)"/>
-    <xs:enumeration value="TVIPS TEMCAM-F415 (4k x 4k)"/>
-    <xs:enumeration value="TVIPS TEMCAM-F416 (4k x 4k)"/>
-    <xs:enumeration value="TVIPS TEMCAM-F816 (8k x 8k)"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_scaning_interval

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minExclusive

0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording/digitization_details/sampling_interval

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_scaning_interval">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_average_exposure_time_type

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- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxExclusive	240	- -
minExclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording/average_exposure_time

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-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_average_exposure_time_type">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-    <xs:maxExclusive value="240"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_electron_dose

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	1000	- -
minExclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording/average_electron_dose_per_image

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-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_electron_dose">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-    <xs:maxInclusive value="1000"/>
-  </xs:restriction>
-</xs:simpleType>

-

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-

Complex Type base_image_processing_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

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Diagram

-

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Diagram

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Used by

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- - - - - - - - - -

Element	image_processing
Complex Types	crystallography_processing_type, helical_processing_type, singleparticle_processing_type, subtomogram_averaging_processing_type, tomography_processing_type

-

-

Model

-

-

image_recording_id , details{0,1}

-

Children

details, image_recording_id

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Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="base_image_processing_type">
-  <xs:sequence>
-    <xs:element name="image_recording_id" type="xs:positiveInteger"/>
-    <xs:element name="details" type="xs:token" minOccurs="0"/>
-  </xs:sequence>
-  <xs:attribute name="image_processing_id" type="xs:positiveInteger" use="required"/>
-</xs:complexType>

-

-

-

-

Complex Type map_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

entry_type/map, interpretation_type/additional_map_list/additional_map, interpretation_type/half_map_list/half_map, interpretation_type/segmentation_list/segmentation/mask_details, interpretation_type/slices_list/slice

-

-

Model

-

-

file , symmetry{0,1} , data_type , dimensions , origin , spacing , cell , axis_order , statistics{0,1} , pixel_spacing , contour_list{0,1} , label{0,1} , annotation_details{0,1} , details{0,1}

-

Children

annotation_details, axis_order, cell, contour_list, data_type, details, dimensions, file, label, origin, pixel_spacing, spacing, statistics, symmetry

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
format		CCP4	required	- -
size_kbytes	xs:positiveInteger		required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="map_type">
-  <xs:sequence>
-    <xs:element name="file">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="emd_\d{4,}([A-Za-z0-9_]*)\.map(\.gz|)"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="symmetry" type="applied_symmetry_type" minOccurs="0"/>
-    <xs:element name="data_type" type="map_data_type"/>
-    <xs:element name="dimensions" type="integer_vector_map_type"/>
-    <xs:element name="origin">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="col" type="xs:integer"/>
-          <xs:element name="row" type="xs:integer"/>
-          <xs:element name="sec" type="xs:integer"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="spacing">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="x" type="xs:positiveInteger"/>
-          <xs:element name="y" type="xs:nonNegativeInteger"/>
-          <xs:element name="z" type="xs:nonNegativeInteger"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="cell">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="a" type="cell_type"/>
-          <xs:element name="b" type="cell_type"/>
-          <xs:element name="c" type="cell_type"/>
-          <xs:element name="alpha" type="cell_angle_type"/>
-          <xs:element name="beta" type="cell_angle_type"/>
-          <xs:element name="gamma" type="cell_angle_type"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="axis_order">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="fast">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:pattern value="X|Y|Z"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-          <xs:element name="medium">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:pattern value="X|Y|Z"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-          <xs:element name="slow">
-            <xs:simpleType>
-              <xs:restriction base="xs:token">
-                <xs:pattern value="X|Y|Z"/>
-              </xs:restriction>
-            </xs:simpleType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="statistics" type="map_statistics_type" minOccurs="0"/>
-    <xs:element name="pixel_spacing">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="x" type="pixel_spacing_type"/>
-          <xs:element name="y" type="pixel_spacing_type"/>
-          <xs:element name="z" type="pixel_spacing_type"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="contour_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="contour" maxOccurs="unbounded">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element name="level" type="xs:float" minOccurs="0"/>
-                <xs:element name="source" minOccurs="0">
-                  <xs:simpleType>
-                    <xs:restriction base="xs:token">
-                      <xs:enumeration value="EMDB"/>
-                      <xs:enumeration value="AUTHOR"/>
-                      <xs:enumeration value="SOFTWARE"/>
-                      <xs:enumeration value="ANNOTATOR"/>
-                    </xs:restriction>
-                  </xs:simpleType>
-                </xs:element>
-              </xs:sequence>
-              <xs:attribute name="primary" type="xs:boolean" use="required"/>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="label" type="xs:token" minOccurs="0"/>
-    <xs:element name="annotation_details" type="xs:string" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-  <xs:attribute name="format" fixed="CCP4" use="required"/>
-  <xs:attribute name="size_kbytes" type="xs:positiveInteger" use="required"/>
-</xs:complexType>

-

-

-

-

Complex Type applied_symmetry_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

final_reconstruction_type/applied_symmetry, map_type/symmetry

-

-

Model

-

-

space_group | point_group | helical_parameters

-

Children

helical_parameters, point_group, space_group

-

Source

-

-

-

- - - - -

-

<xs:complexType name="applied_symmetry_type">
-  <xs:choice>
-    <xs:element name="space_group" type="xs:int"/>
-    <xs:element name="point_group">
-      <xs:simpleType>
-        <xs:restriction base="point_group_symmetry_type">
-          <xs:pattern value="C\d+|D\d+|O|T|I"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="helical_parameters" type="helical_parameters_type"/>
-  </xs:choice>
-</xs:complexType>

-

-

-

-

Simple Type point_group_symmetry_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - -

pattern

C\d+|D\d+|O|T|I

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

applied_symmetry_type/point_group

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="point_group_symmetry_type">
-  <xs:restriction base="xs:token">
-    <xs:pattern value="C\d+|D\d+|O|T|I"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type helical_parameters_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

applied_symmetry_type/helical_parameters, refinement_type/starting_symmetry/helical_parameters

-

-

Model

-

-

delta_z , delta_phi , axial_symmetry

-

Children

axial_symmetry, delta_phi, delta_z

-

Source

-

-

-

- - - - -

-

<xs:complexType name="helical_parameters_type">
-  <xs:sequence>
-    <xs:element name="delta_z">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_rise_type">
-            <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="delta_phi">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_twist_type">
-            <xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="axial_symmetry">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="[C|D][1-9][0-9]*"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type allowed_rise_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minExclusive

0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

helical_parameters_type/delta_z

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_rise_type">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_twist_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:float

-

Used by

-

-

-

- - - - - -

Element

helical_parameters_type/delta_phi

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_twist_type">
-  <xs:restriction base="xs:float"/>
-</xs:simpleType>

-

-

-

-

Simple Type map_data_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:string

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	IMAGE STORED AS SIGNED BYTE	- -
enumeration	IMAGE STORED AS SIGNED INTEGER (2 BYTES)	- -
enumeration	IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

map_type/data_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="map_data_type">
-  <xs:restriction base="xs:string">
-    <xs:enumeration value="IMAGE STORED AS SIGNED BYTE"/>
-    <xs:enumeration value="IMAGE STORED AS SIGNED INTEGER (2 BYTES)"/>
-    <xs:enumeration value="IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type integer_vector_map_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

map_type/dimensions

-

-

Model

-

-

col , row , sec

-

Children

col, row, sec

-

Source

-

-

-

- - - - -

-

<xs:complexType name="integer_vector_map_type">
-  <xs:sequence>
-    <xs:element name="col" type="xs:positiveInteger"/>
-    <xs:element name="row" type="xs:positiveInteger"/>
-    <xs:element name="sec" type="xs:positiveInteger"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type cell_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_cell_dim

Type hierarchy

-

xs:float
- allowed_cell_dim
  - cell_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Elements

map_type/cell/a, map_type/cell/b, map_type/cell/c, unit_cell_type/a, unit_cell_type/b, unit_cell_type/c, unit_cell_type/c_sampling_length

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="cell_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_cell_dim">
-      <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_cell_dim

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minExclusive

0.0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

cell_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_cell_dim">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0.0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type cell_angle_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_cell_angle

Type hierarchy

-

xs:float
- allowed_cell_angle
  - cell_angle_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Elements

map_type/cell/alpha, map_type/cell/beta, map_type/cell/gamma, unit_cell_type/alpha, unit_cell_type/beta, unit_cell_type/gamma

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	deg	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="cell_angle_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_cell_angle">
-      <xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_cell_angle

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxExclusive	180.0	- -
minExclusive	0.0	- -

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

cell_angle_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_cell_angle">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0.0"/>
-    <xs:maxExclusive value="180.0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type map_statistics_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

map_type/statistics

-

-

Model

-

-

minimum , maximum , average , std

-

Children

average, maximum, minimum, std

-

Source

-

-

-

- - - - -

-

<xs:complexType name="map_statistics_type">
-  <xs:sequence>
-    <xs:element name="minimum" type="xs:float"/>
-    <xs:element name="maximum" type="xs:float"/>
-    <xs:element name="average" type="xs:float"/>
-    <xs:element name="std" type="xs:float"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type pixel_spacing_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_pixel_sampling

Type hierarchy

-

xs:float
- allowed_pixel_sampling
  - pixel_spacing_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Elements

map_type/pixel_spacing/x, map_type/pixel_spacing/y, map_type/pixel_spacing/z

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	Å	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="pixel_spacing_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_pixel_sampling">
-      <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_pixel_sampling

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minExclusive

0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

pixel_spacing_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_pixel_sampling">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type interpretation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

entry_type/interpretation

-

-

Model

-

-

modelling_list{0,1} , figure_list{0,1} , segmentation_list{0,1} , slices_list{0,1} , additional_map_list{0,1} , half_map_list{0,1}

-

Children

additional_map_list, figure_list, half_map_list, modelling_list, segmentation_list, slices_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="interpretation_type">
-  <xs:sequence>
-    <xs:element name="modelling_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="modelling" type="modelling_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="figure_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="figure" type="figure_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="segmentation_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="segmentation" maxOccurs="unbounded">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element name="file">
-                  <xs:simpleType>
-                    <xs:restriction base="xs:token">
-                      <xs:pattern value="[emd_\d{4,}]+.*"/>
-                    </xs:restriction>
-                  </xs:simpleType>
-                </xs:element>
-                <xs:element name="details" type="xs:string" minOccurs="0"/>
-                <xs:element name="mask_details" type="map_type" minOccurs="0"/>
-              </xs:sequence>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="slices_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="slice" type="map_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="additional_map_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="additional_map" type="map_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="half_map_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="half_map" type="map_type" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <!-- 
-            <xs:element name="reference_map_for_composition" minOccurs="0">
-                <xs:complexType>
-                    <xs:sequence>
-                        <xs:element name="ref_map" minOccurs="0" type="map_type"/>
-                    </xs:sequence>
-                </xs:complexType>
-            </xs:element>
-            -->
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type modelling_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

interpretation_type/modelling_list/modelling

-

-

Model

-

-

initial_model* , final_model{0,1} , refinement_protocol{0,1} , software_list{0,1} , details{0,1} , target_criteria{0,1} , refinement_space{0,1} , overall_bvalue{0,1}

-

Children

details, final_model, initial_model, overall_bvalue, refinement_protocol, refinement_space, software_list, target_criteria

-

Source

-

-

-

- - - - -

-

<xs:complexType name="modelling_type">
-  <xs:sequence>
-    <xs:element name="initial_model" minOccurs="0" maxOccurs="unbounded">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="access_code" type="xs:token" minOccurs="0">
-          </xs:element>
-          <xs:element minOccurs="0" name="chain">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element minOccurs="0" name="chain_id" type="xs:token"/>
-                <xs:element minOccurs="0" name="residue_range">
-                  <xs:simpleType>
-                    <xs:restriction base="xs:token">
-                      <xs:pattern value="\d+-\d+"/>
-                    </xs:restriction>
-                  </xs:simpleType>
-                </xs:element>
-                <xs:element minOccurs="0" name="number_of_copies_in_final_model" type="xs:positiveInteger"/>
-                <xs:element maxOccurs="1" minOccurs="0" name="source_name">
-                  <xs:simpleType>
-                    <xs:restriction base="xs:string">
-                      <xs:enumeration value="PDB"/>
-                      <xs:enumeration value="AlphaFold"/>
-                      <xs:enumeration value="ITasser"/>
-                      <xs:enumeration value="ModelArchive"/>
-                      <xs:enumeration value="Modeller"/>
-                      <xs:enumeration value="RoseTTAFold"/>
-                      <xs:enumeration value="SwissModel"/>
-                      <xs:enumeration value="Other"/>
-                    </xs:restriction>
-                  </xs:simpleType>
-                </xs:element>
-                <xs:element maxOccurs="1" minOccurs="0" name="initial_model_type">
-                  <xs:simpleType>
-                    <xs:restriction base="xs:string">
-                      <xs:enumeration value="experimental model"/>
-                      <xs:enumeration value="in silico model"/>
-                      <xs:enumeration value="integrative model"/>
-                      <xs:enumeration value="other"/>
-                    </xs:restriction>
-                  </xs:simpleType>
-                </xs:element>
-              </xs:sequence>
-            </xs:complexType>
-          </xs:element>
-          <xs:element minOccurs="0" name="details" type="xs:string"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="final_model" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="access_code" type="pdb_code_type"/>
-          <xs:element name="chain" type="chain_type" minOccurs="0" maxOccurs="unbounded"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="refinement_protocol" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:string">
-          <xs:enumeration value="AB INITIO MODEL"/>
-          <xs:enumeration value="BACKBONE TRACE"/>
-          <xs:enumeration value="FLEXIBLE FIT"/>
-          <xs:enumeration value="OTHER"/>
-          <xs:enumeration value="RIGID BODY FIT"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-    <xs:element name="target_criteria" type="xs:token" minOccurs="0"/>
-    <xs:element name="refinement_space" type="xs:token" minOccurs="0"/>
-    <xs:element name="overall_bvalue" type="xs:float" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type chain_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

modelling_type/final_model/chain, molecular_replacement_type/starting_model/chain, pdb_model_type/chain_id_list

-

-

Model

-

-

chain_id* , residue_range{0,1}

-

Children

chain_id, residue_range

-

Source

-

-

-

- - - - -

-

<xs:complexType name="chain_type">
-  <xs:sequence>
-    <xs:element name="chain_id" type="chain_pdb_id" minOccurs="0" maxOccurs="unbounded"/>
-    <xs:element name="residue_range" minOccurs="0" maxOccurs="1">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="\d+-\d+"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type chain_pdb_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - -

pattern

\d|[A-Za-z]{1,2}

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

chain_type/chain_id

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="chain_pdb_id">
-  <xs:restriction base="xs:token">
-    <xs:pattern value="\d|[A-Za-z]{1,2}"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type figure_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

interpretation_type/figure_list/figure

-

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Source

-

-

-

- - - - -

-

<xs:complexType name="figure_type">
-  <xs:sequence>
-    <xs:element name="file">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="emd_\d{4,}.+"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type validation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - - - - - -

Element	validation_method
Complex Types	crystallography_validation_type, fsc_curve_validation_type, layer_lines_validation_type, structure_factors_validation_type

-

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Source

-

-

-

- - - - -

-

<xs:complexType name="validation_type">
-  <xs:sequence>
-    <xs:element name="file">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:pattern value="emd_\d{4,}_fsc(_[1-9]{1,})*.xml"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type part_revision_change_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_revision_change_type

Type hierarchy

-

base_revision_change_type
- part_revision_change_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

additional_map, fsc, half_map, image, mask

-

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}

-

Children

description, details, provider, revision_group, revision_type

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
part	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="part_revision_change_type">
-  <xs:complexContent>
-    <xs:extension base="base_revision_change_type">
-      <xs:attribute name="part" type="xs:positiveInteger"/>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type complex_revision_change_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_revision_change_type

Type hierarchy

-

base_revision_change_type
- complex_revision_change_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

metadata, model

-

-

Model

-

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1} , categories{0,1} , items{0,1}

-

Children

categories, description, details, items, provider, revision_group, revision_type

-

Source

-

-

-

- - - - -

-

<xs:complexType name="complex_revision_change_type">
-  <xs:complexContent>
-    <xs:extension base="base_revision_change_type">
-      <xs:sequence>
-        <xs:element name="categories" minOccurs="0">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="category" type="revision_category_or_item_type" minOccurs="1" maxOccurs="unbounded"/>
-            </xs:sequence>
-          </xs:complexType>
-        </xs:element>
-        <xs:element name="items" minOccurs="0">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="item" type="revision_category_or_item_type" minOccurs="1" maxOccurs="unbounded"/>
-            </xs:sequence>
-          </xs:complexType>
-        </xs:element>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type revision_category_or_item_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Used by

-

-

-

- - - - - -

Elements

complex_revision_change_type/categories/category, complex_revision_change_type/items/item

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
part	xs:positiveInteger	optional	- -
revision_action	xs:token	required	- -
revision_type	xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="revision_category_or_item_type">
-  <xs:simpleContent>
-    <xs:extension base="xs:token">
-      <xs:attribute name="revision_type" type="xs:token" use="required"/>
-      <xs:attribute name="part" type="xs:positiveInteger"/>
-      <xs:attribute name="revision_action" type="xs:token" use="required"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type author_enums

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:string

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	Accelerated Technologies Center for Gene to 3D Structure (ATCG3D)	- -
enumeration	Assembly, Dynamics and Evolution of Cell-Cell and Cell-Matrix Adhesions (CELLMAT)	- -
enumeration	Atoms-to-Animals: The Immune Function Network (IFN)	- -
enumeration	Bacterial targets at IGS-CNRS, France (BIGS)	- -
enumeration	Berkeley Structural Genomics Center (BSGC)	- -
enumeration	Center for Eukaryotic Structural Genomics (CESG)	- -
enumeration	Center for High-Throughput Structural Biology (CHTSB)	- -
enumeration	Center for Membrane Proteins of Infectious Diseases (MPID)	- -
enumeration	Center for Structural Biology of Infectious Diseases (CSBID)	- -
enumeration	Center for Structural Genomics of Infectious Diseases (CSGID)	- -
enumeration	Center for Structures of Membrane Proteins (CSMP)	- -
enumeration	Center for the X-ray Structure Determination of Human Transporters (TransportPDB)	- -
enumeration	Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)	- -
enumeration	Enzyme Discovery for Natural Product Biosynthesis (NatPro)	- -
enumeration	GPCR Network (GPCR)	- -
enumeration	Integrated Center for Structure and Function Innovation (ISFI)	- -
enumeration	Israel Structural Proteomics Center (ISPC)	- -
enumeration	Joint Center for Structural Genomics (JCSG)	- -
enumeration	Marseilles Structural Genomics Program @ AFMB (MSGP)	- -
enumeration	Medical Structural Genomics of Pathogenic Protozoa (MSGPP)	- -
enumeration	Membrane Protein Structural Biology Consortium (MPSBC)	- -
enumeration	Membrane Protein Structures by Solution NMR (MPSbyNMR)	- -
enumeration	Midwest Center for Macromolecular Research (MCMR)	- -
enumeration	Midwest Center for Structural Genomics (MCSG)	- -
enumeration	Mitochondrial Protein Partnership (MPP)	- -
enumeration	Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)	- -
enumeration	Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)	- -
enumeration	New York Consortium on Membrane Protein Structure (NYCOMPS)	- -
enumeration	New York SGX Research Center for Structural Genomics (NYSGXRC)	- -
enumeration	New York Structural GenomiX Research Consortium (NYSGXRC)	- -
enumeration	New York Structural Genomics Research Consortium (NYSGRC)	- -
enumeration	Northeast Structural Genomics Consortium (NESG)	- -
enumeration	Nucleocytoplasmic Transport: a Target for Cellular Control (NPCXstals)	- -
enumeration	Ontario Centre for Structural Proteomics (OCSP)	- -
enumeration	Oxford Protein Production Facility (OPPF)	- -
enumeration	Paris-Sud Yeast Structural Genomics (YSG)	- -
enumeration	Partnership for Nuclear Receptor Signaling Code Biology (NHRs)	- -
enumeration	Partnership for Stem Cell Biology (STEMCELL)	- -
enumeration	Partnership for T-Cell Biology (TCELL)	- -
enumeration	Program for the Characterization of Secreted Effector Proteins (PCSEP)	- -
enumeration	Protein Structure Factory (PSF)	- -
enumeration	QCRG Structural Biology Consortium	- -
enumeration	RIKEN Structural Genomics/Proteomics Initiative (RSGI)	- -
enumeration	Scottish Structural Proteomics Facility (SSPF)	- -
enumeration	Seattle Structural Genomics Center for Infectious Disease (SSGCID)	- -
enumeration	South Africa Structural Targets Annotation Database (SASTAD)	- -
enumeration	Southeast Collaboratory for Structural Genomics (SECSG)	- -
enumeration	Structural Genomics Consortium (SGC)	- -
enumeration	Structural Genomics Consortium for Research on Gene Expression (SGCGES)	- -
enumeration	Structural Genomics of Pathogenic Protozoa Consortium (SGPP)	- -
enumeration	Structural Proteomics in Europe (SPINE)	- -
enumeration	Structural Proteomics in Europe 2 (SPINE-2)	- -
enumeration	Structure 2 Function Project (S2F)	- -
enumeration	Structure, Dynamics and Activation Mechanisms of Chemokine Receptors (CHSAM)	- -
enumeration	Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)	- -
enumeration	Structure-Function Studies of Tight Junction Membrane Proteins (TJMP)	- -
enumeration	Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)	- -
enumeration	TB Structural Genomics Consortium (TBSGC)	- -
enumeration	Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS)	- -
enumeration	Transmembrane Protein Center (TMPC)	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="author_enums">
-  <xs:restriction base="xs:string">
-    <xs:enumeration value="Accelerated Technologies Center for Gene to 3D Structure (ATCG3D)"/>
-    <xs:enumeration value="Assembly, Dynamics and Evolution of Cell-Cell and Cell-Matrix Adhesions (CELLMAT)"/>
-    <xs:enumeration value="Atoms-to-Animals: The Immune Function Network (IFN)"/>
-    <xs:enumeration value="Bacterial targets at IGS-CNRS, France (BIGS)"/>
-    <xs:enumeration value="Berkeley Structural Genomics Center (BSGC)"/>
-    <xs:enumeration value="Center for Eukaryotic Structural Genomics (CESG)"/>
-    <xs:enumeration value="Center for High-Throughput Structural Biology (CHTSB)"/>
-    <xs:enumeration value="Center for Membrane Proteins of Infectious Diseases (MPID)"/>
-    <xs:enumeration value="Center for Structural Biology of Infectious Diseases (CSBID)"/>
-    <xs:enumeration value="Center for Structural Genomics of Infectious Diseases (CSGID)"/>
-    <xs:enumeration value="Center for Structures of Membrane Proteins (CSMP)"/>
-    <xs:enumeration value="Center for the X-ray Structure Determination of Human Transporters (TransportPDB)"/>
-    <xs:enumeration value="Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)"/>
-    <xs:enumeration value="Enzyme Discovery for Natural Product Biosynthesis (NatPro)"/>
-    <xs:enumeration value="GPCR Network (GPCR)"/>
-    <xs:enumeration value="Integrated Center for Structure and Function Innovation (ISFI)"/>
-    <xs:enumeration value="Israel Structural Proteomics Center (ISPC)"/>
-    <xs:enumeration value="Joint Center for Structural Genomics (JCSG)"/>
-    <xs:enumeration value="Marseilles Structural Genomics Program @ AFMB (MSGP)"/>
-    <xs:enumeration value="Medical Structural Genomics of Pathogenic Protozoa (MSGPP)"/>
-    <xs:enumeration value="Membrane Protein Structural Biology Consortium (MPSBC)"/>
-    <xs:enumeration value="Membrane Protein Structures by Solution NMR (MPSbyNMR)"/>
-    <xs:enumeration value="Midwest Center for Macromolecular Research (MCMR)"/>
-    <xs:enumeration value="Midwest Center for Structural Genomics (MCSG)"/>
-    <xs:enumeration value="Mitochondrial Protein Partnership (MPP)"/>
-    <xs:enumeration value="Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)"/>
-    <xs:enumeration value="Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)"/>
-    <xs:enumeration value="New York Consortium on Membrane Protein Structure (NYCOMPS)"/>
-    <xs:enumeration value="New York SGX Research Center for Structural Genomics (NYSGXRC)"/>
-    <xs:enumeration value="New York Structural GenomiX Research Consortium (NYSGXRC)"/>
-    <xs:enumeration value="New York Structural Genomics Research Consortium (NYSGRC)"/>
-    <xs:enumeration value="Northeast Structural Genomics Consortium (NESG)"/>
-    <xs:enumeration value="Nucleocytoplasmic Transport: a Target for Cellular Control (NPCXstals)"/>
-    <xs:enumeration value="Ontario Centre for Structural Proteomics (OCSP)"/>
-    <xs:enumeration value="Oxford Protein Production Facility (OPPF)"/>
-    <xs:enumeration value="Paris-Sud Yeast Structural Genomics (YSG)"/>
-    <xs:enumeration value="Partnership for Nuclear Receptor Signaling Code Biology (NHRs)"/>
-    <xs:enumeration value="Partnership for Stem Cell Biology (STEMCELL)"/>
-    <xs:enumeration value="Partnership for T-Cell Biology (TCELL)"/>
-    <xs:enumeration value="Program for the Characterization of Secreted Effector Proteins (PCSEP)"/>
-    <xs:enumeration value="Protein Structure Factory (PSF)"/>
-    <xs:enumeration value="QCRG Structural Biology Consortium"/>
-    <xs:enumeration value="RIKEN Structural Genomics/Proteomics Initiative (RSGI)"/>
-    <xs:enumeration value="Scottish Structural Proteomics Facility (SSPF)"/>
-    <xs:enumeration value="Seattle Structural Genomics Center for Infectious Disease (SSGCID)"/>
-    <xs:enumeration value="South Africa Structural Targets Annotation Database (SASTAD)"/>
-    <xs:enumeration value="Southeast Collaboratory for Structural Genomics (SECSG)"/>
-    <xs:enumeration value="Structural Genomics Consortium (SGC)"/>
-    <xs:enumeration value="Structural Genomics Consortium for Research on Gene Expression (SGCGES)"/>
-    <xs:enumeration value="Structural Genomics of Pathogenic Protozoa Consortium (SGPP)"/>
-    <xs:enumeration value="Structural Proteomics in Europe (SPINE)"/>
-    <xs:enumeration value="Structural Proteomics in Europe 2 (SPINE-2)"/>
-    <xs:enumeration value="Structure 2 Function Project (S2F)"/>
-    <xs:enumeration value="Structure, Dynamics and Activation Mechanisms of Chemokine Receptors (CHSAM)"/>
-    <xs:enumeration value="Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)"/>
-    <xs:enumeration value="Structure-Function Studies of Tight Junction Membrane Proteins (TJMP)"/>
-    <xs:enumeration value="Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)"/>
-    <xs:enumeration value="TB Structural Genomics Consortium (TBSGC)"/>
-    <xs:enumeration value="Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS)"/>
-    <xs:enumeration value="Transmembrane Protein Center (TMPC)"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type author_order_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of author_ORCID_type

Type hierarchy

-

xs:anySimpleType
- author_type
  - author_ORCID_type
    - author_order_type
    -
  -
-

-

-

Used by

-

-

-

- - - - - -

Elements

journal_citation/author, non_journal_citation/author, non_journal_citation/editor

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
ORCID	ORCID_type	optional	- -
order	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="author_order_type">
-  <xs:simpleContent>
-    <xs:extension base="author_ORCID_type">
-      <xs:attribute name="order" type="xs:positiveInteger"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type page_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

xs:string

-

Used by

-

-

-

- - - - - -

Elements

journal_citation/first_page, journal_citation/last_page, non_journal_citation/first_page, non_journal_citation/last_page

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="page_type">
-  <xs:restriction base="xs:string"/>
-</xs:simpleType>

-

-

-

-

Complex Type cell_supramolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- cell_supramolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

cell_supramolecule

-

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , synthetic_source*

-

Children

category, details, external_references, macromolecule_list, name, natural_source, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, synthetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="cell_supramolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_supramolecule_type">
-      <xs:sequence>
-        <xs:element name="natural_source" type="cell_source_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="synthetic_source" type="cell_source_type" minOccurs="0" maxOccurs="unbounded"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type cell_source_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_source_type

Type hierarchy

-

base_source_type
- cell_source_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

cell_supramolecule_type/natural_source, cell_supramolecule_type/synthetic_source

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1}

-

Children

cell, details, organ, organism, strain, synonym_organism, tissue

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="cell_source_type">
-  <xs:complexContent>
-    <xs:extension base="base_source_type">
-      <xs:sequence>
-        <xs:element name="organ" type="xs:token" minOccurs="0"/>
-        <xs:element name="tissue" type="xs:token" minOccurs="0"/>
-        <xs:element name="cell" type="xs:token" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type complex_supramolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- complex_supramolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

complex_supramolecule

-

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , synthetic_source* , recombinant_expression* , molecular_weight{0,1} , ribosome-details{0,1}

-

Children

category, details, external_references, macromolecule_list, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, recombinant_expression, ribosome-details, synthetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
chimera	xs:boolean	true	optional	- -
supramolecule_id	xs:positiveInteger		required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="complex_supramolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_supramolecule_type">
-      <xs:sequence>
-        <xs:element name="natural_source" type="complex_source_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="synthetic_source" type="complex_source_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>
-        <xs:element name="ribosome-details" type="xs:string" minOccurs="0"/>
-      </xs:sequence>
-      <xs:attribute name="chimera" type="xs:boolean" fixed="true"/>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type complex_source_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_source_type

Type hierarchy

-

base_source_type
- complex_source_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

complex_supramolecule_type/natural_source, complex_supramolecule_type/synthetic_source

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="complex_source_type">
-  <xs:complexContent>
-    <xs:extension base="base_source_type">
-      <xs:sequence>
-        <xs:element name="organ" type="xs:token" minOccurs="0"/>
-        <xs:element name="tissue" type="xs:token" minOccurs="0"/>
-        <xs:element name="cell" type="xs:token" minOccurs="0"/>
-        <xs:element name="organelle" type="xs:token" minOccurs="0"/>
-        <xs:element name="cellular_location" type="xs:token" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type recombinant_source_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

complex_supramolecule_type/recombinant_expression, ligand_macromolecule_type/recombinant_expression, organelle_or_cellular_component_supramolecule_type/recombinant_expression, other_macromolecule_type/recombinant_expression, protein_or_peptide_macromolecule_type/recombinant_expression, virus_supramolecule_type/host_system

-

-

Model

-

-

recombinant_organism , recombinant_strain{0,1} , recombinant_cell{0,1} , recombinant_plasmid{0,1} , recombinant_synonym_organism{0,1}

-

Children

recombinant_cell, recombinant_organism, recombinant_plasmid, recombinant_strain, recombinant_synonym_organism

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="recombinant_source_type">
-  <xs:sequence>
-    <xs:element name="recombinant_organism" type="organism_type"/>
-    <xs:element name="recombinant_strain" type="xs:token" minOccurs="0"/>
-    <xs:element name="recombinant_cell" type="xs:token" minOccurs="0"/>
-    <xs:element name="recombinant_plasmid" type="xs:token" minOccurs="0"/>
-    <xs:element name="recombinant_synonym_organism" type="xs:token" minOccurs="0"/>
-  </xs:sequence>
-  <xs:attribute name="database" use="required">
-    <xs:simpleType>
-      <xs:restriction base="xs:token">
-        <xs:enumeration value="NCBI"/>
-      </xs:restriction>
-    </xs:simpleType>
-  </xs:attribute>
-</xs:complexType>

-

-

-

-

Complex Type organelle_or_cellular_component_supramolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- organelle_or_cellular_component_supramolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

organelle_or_cellular_component_supramolecule

-

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , synthetic_source* , molecular_weight{0,1} , recombinant_expression{0,1}

-

Children

category, details, external_references, macromolecule_list, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, recombinant_expression, synthetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="organelle_or_cellular_component_supramolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_supramolecule_type">
-      <xs:sequence>
-        <xs:element name="natural_source" type="organelle_source_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="synthetic_source" type="organelle_source_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>
-        <xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0" maxOccurs="1"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type organelle_source_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_source_type

Type hierarchy

-

base_source_type
- organelle_source_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

organelle_or_cellular_component_supramolecule_type/natural_source, organelle_or_cellular_component_supramolecule_type/synthetic_source

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1} , organelle{0,1} , cellular_location{0,1}

-

Children

cell, cellular_location, details, organ, organelle, organism, strain, synonym_organism, tissue

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="organelle_source_type">
-  <xs:complexContent>
-    <xs:extension base="base_source_type">
-      <xs:sequence>
-        <xs:element name="organ" type="xs:token" minOccurs="0"/>
-        <xs:element name="tissue" type="xs:token" minOccurs="0"/>
-        <xs:element name="cell" type="xs:token" minOccurs="0"/>
-        <xs:element name="organelle" type="xs:token" minOccurs="0"/>
-        <xs:element name="cellular_location" type="xs:token" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type sample_supramolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- sample_supramolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

sample_supramolecule

-

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , synthetic_source* , number_unique_components{0,1} , molecular_weight{0,1}

-

Children

category, details, external_references, macromolecule_list, molecular_weight, name, natural_source, number_of_copies, number_unique_components, oligomeric_state, parent, recombinant_exp_flag, synthetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="sample_supramolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_supramolecule_type">
-      <xs:sequence>
-        <xs:element name="natural_source" type="sample_source_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="synthetic_source" type="sample_source_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="number_unique_components" type="xs:positiveInteger" minOccurs="0"/>
-        <xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type sample_source_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_source_type

Type hierarchy

-

base_source_type
- sample_source_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

sample_supramolecule_type/natural_source, sample_supramolecule_type/synthetic_source

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1} , cell{0,1}

-

Children

cell, details, organ, organism, strain, synonym_organism, tissue

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="sample_source_type">
-  <xs:complexContent>
-    <xs:extension base="base_source_type">
-      <xs:sequence>
-        <xs:element name="organ" type="xs:token" minOccurs="0"/>
-        <xs:element name="tissue" type="xs:token" minOccurs="0"/>
-        <xs:element name="cell" type="xs:token" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type tissue_supramolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- tissue_supramolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

tissue_supramolecule

-

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , natural_source* , sythetic_source*

-

Children

category, details, external_references, macromolecule_list, name, natural_source, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, sythetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="tissue_supramolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_supramolecule_type">
-      <xs:sequence>
-        <xs:element name="natural_source" type="tissue_source_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="sythetic_source" type="tissue_source_type" minOccurs="0" maxOccurs="unbounded"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type tissue_source_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_source_type

Type hierarchy

-

base_source_type
- tissue_source_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

tissue_supramolecule_type/natural_source, tissue_supramolecule_type/sythetic_source

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1} , organ{0,1} , tissue{0,1}

-

Children

details, organ, organism, strain, synonym_organism, tissue

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="tissue_source_type">
-  <xs:complexContent>
-    <xs:extension base="base_source_type">
-      <xs:sequence>
-        <xs:element name="organ" type="xs:token" minOccurs="0"/>
-        <xs:element name="tissue" type="xs:token" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type virus_supramolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_supramolecule_type

Type hierarchy

-

base_supramolecule_type
- virus_supramolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

virus_supramolecule

-

-

Model

-

-

name , category{0,1} , parent , macromolecule_list{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , external_references* , recombinant_exp_flag{0,1} , sci_species_name{0,1} , sci_species_strain{0,1} , natural_host* , synthetic_host* , host_system{0,1} , molecular_weight{0,1} , virus_shell* , virus_type , virus_isolate , virus_enveloped , virus_empty , syn_species_name{0,1} , sci_species_serotype{0,1} , sci_species_serocomplex{0,1} , sci_species_subspecies{0,1}

-

Children

category, details, external_references, host_system, macromolecule_list, molecular_weight, name, natural_host, number_of_copies, oligomeric_state, parent, recombinant_exp_flag, sci_species_name, sci_species_serocomplex, sci_species_serotype, sci_species_strain, sci_species_subspecies, syn_species_name, synthetic_host, virus_empty, virus_enveloped, virus_isolate, virus_shell, virus_type

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
supramolecule_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="virus_supramolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_supramolecule_type">
-      <xs:sequence>
-        <xs:element name="sci_species_name" type="virus_species_name_type" minOccurs="0"/>
-        <xs:element name="sci_species_strain" type="xs:string" minOccurs="0" maxOccurs="1"/>
-        <xs:element name="natural_host" type="virus_host_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="synthetic_host" type="virus_host_type" minOccurs="0" maxOccurs="unbounded"/>
-        <xs:element name="host_system" type="recombinant_source_type" minOccurs="0"/>
-        <xs:element name="molecular_weight" type="molecular_weight_type" minOccurs="0"/>
-        <xs:element name="virus_shell" minOccurs="0" maxOccurs="unbounded">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="name" type="xs:token" nillable="false" minOccurs="0"/>
-              <xs:element name="diameter" minOccurs="0">
-                <xs:complexType>
-                  <xs:simpleContent>
-                    <xs:extension base="allowed_shell_diameter">
-                      <xs:attribute name="units" fixed="Å" use="required"/>
-                    </xs:extension>
-                  </xs:simpleContent>
-                </xs:complexType>
-              </xs:element>
-              <xs:element name="triangulation" type="xs:positiveInteger" minOccurs="0"/>
-            </xs:sequence>
-            <xs:attribute name="shell_id" type="xs:positiveInteger"/>
-          </xs:complexType>
-        </xs:element>
-        <xs:element name="virus_type">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="PRION"/>
-              <xs:enumeration value="SATELLITE"/>
-              <xs:enumeration value="VIRION"/>
-              <xs:enumeration value="VIROID"/>
-              <xs:enumeration value="VIRUS-LIKE PARTICLE"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:element>
-        <xs:element name="virus_isolate">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="OTHER"/>
-              <xs:enumeration value="SEROCOMPLEX"/>
-              <xs:enumeration value="SEROTYPE"/>
-              <xs:enumeration value="SPECIES"/>
-              <xs:enumeration value="STRAIN"/>
-              <xs:enumeration value="SUBSPECIES"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:element>
-        <xs:element name="virus_enveloped" type="xs:boolean"/>
-        <xs:element name="virus_empty" type="xs:boolean"/>
-        <xs:element name="syn_species_name" type="xs:string" minOccurs="0" maxOccurs="1"/>
-        <xs:element name="sci_species_serotype" type="xs:string" minOccurs="0" maxOccurs="1"/>
-        <xs:element name="sci_species_serocomplex" type="xs:string" minOccurs="0" maxOccurs="1"/>
-        <xs:element name="sci_species_subspecies" type="xs:string" minOccurs="0" maxOccurs="1"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type virus_species_name_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:token

-

Used by

-

-

-

- - - - - -

Element

virus_supramolecule_type/sci_species_name

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
ncbi	xs:positiveInteger	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="virus_species_name_type">
-  <xs:simpleContent>
-    <xs:extension base="xs:token">
-      <xs:attribute name="ncbi" type="xs:positiveInteger"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Complex Type virus_host_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_source_type

Type hierarchy

-

base_source_type
- virus_host_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

virus_supramolecule_type/natural_host, virus_supramolecule_type/synthetic_host

-

-

Model

-

-

organism , strain{0,1} , synonym_organism{0,1} , details{0,1}

-

Children

details, organism, strain, synonym_organism

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
database	restriction of xs:token	optional	- -
synthetically_produced	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="virus_host_type">
-  <xs:complexContent>
-    <xs:extension base="base_source_type"/>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_shell_diameter

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	10000	- -
minInclusive	10	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

virus_supramolecule_type/virus_shell/diameter

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_shell_diameter">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="10"/>
-    <xs:maxInclusive value="10000"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type dna_macromolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- dna_macromolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

dna

-

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , sequence , classification{0,1} , structure{0,1} , synthetic_flag{0,1} , synthetic_source{0,1}

-

Children

classification, details, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, sequence, structure, synthetic_flag, synthetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="dna_macromolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_macromolecule_type">
-      <xs:sequence>
-        <xs:element name="sequence">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="string" type="xs:token"/>
-              <xs:element name="discrepancy_list" minOccurs="0">
-                <xs:complexType>
-                  <xs:sequence>
-                    <xs:element name="discrepancy" maxOccurs="unbounded">
-                      <xs:simpleType>
-                        <xs:restriction base="xs:token">
-                          <xs:pattern value="[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]"/>
-                        </xs:restriction>
-                      </xs:simpleType>
-                    </xs:element>
-                  </xs:sequence>
-                </xs:complexType>
-              </xs:element>
-              <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-                <xs:complexType>
-                  <xs:simpleContent>
-                    <xs:extension base="xs:token">
-                      <xs:attribute name="type" use="required">
-                        <xs:simpleType>
-                          <xs:restriction base="xs:token">
-                            <xs:enumeration value="REFSEQ"/>
-                            <xs:enumeration value="GENBANK"/>
-                            <xs:whiteSpace value="collapse"/>
-                          </xs:restriction>
-                        </xs:simpleType>
-                      </xs:attribute>
-                    </xs:extension>
-                  </xs:simpleContent>
-                </xs:complexType>
-              </xs:element>
-            </xs:sequence>
-          </xs:complexType>
-        </xs:element>
-        <xs:element name="classification" minOccurs="0">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="DNA"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:element>
-        <xs:element name="structure" type="xs:token" minOccurs="0"/>
-        <xs:element name="synthetic_flag" type="xs:boolean" minOccurs="0"/>
-        <xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type em_label_macromolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- em_label_macromolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

em_label

-

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , formula{0,1} , synthetic_source{0,1}

-

Children

details, formula, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, synthetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="em_label_macromolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_macromolecule_type">
-      <xs:sequence>
-        <xs:element name="formula" type="formula_type" minOccurs="0"/>
-        <xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type ligand_macromolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- ligand_macromolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

ligand

-

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , formula{0,1} , external_references* , recombinant_expression{0,1}

-

Children

details, external_references, formula, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, recombinant_expression

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="ligand_macromolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_macromolecule_type">
-      <xs:sequence>
-        <xs:element name="formula" type="formula_type" minOccurs="0"/>
-        <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-          <xs:complexType>
-            <xs:simpleContent>
-              <xs:extension base="xs:token">
-                <xs:attribute name="type">
-                  <xs:simpleType>
-                    <xs:restriction base="xs:token">
-                      <xs:whiteSpace value="collapse"/>
-                      <xs:enumeration value="CAS"/>
-                      <xs:enumeration value="PUBCHEM"/>
-                      <xs:enumeration value="DRUGBANK"/>
-                      <xs:enumeration value="CHEBI"/>
-                      <xs:enumeration value="CHEMBL"/>
-                    </xs:restriction>
-                  </xs:simpleType>
-                </xs:attribute>
-              </xs:extension>
-            </xs:simpleContent>
-          </xs:complexType>
-        </xs:element>
-        <xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type other_macromolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- other_macromolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

other_macromolecule

-

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , sequence{0,1} , classification , recombinant_expression{0,1} , structure{0,1} , synthetic_flag{0,1} , synthetic_source{0,1}

-

Children

classification, details, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, recombinant_expression, sequence, structure, synthetic_flag, synthetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="other_macromolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_macromolecule_type">
-      <xs:sequence>
-        <xs:element name="sequence" minOccurs="0">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="string">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token"/>
-                </xs:simpleType>
-              </xs:element>
-              <xs:element name="discrepancy_list" minOccurs="0">
-                <xs:complexType>
-                  <xs:sequence>
-                    <xs:element name="discrepancy" maxOccurs="unbounded">
-                      <xs:simpleType>
-                        <xs:restriction base="xs:token">
-                          <xs:pattern value="[AGCTRYSWKMBDHVN\.-]\d+[AGCTRYSWKMBDHVN\.-]"/>
-                        </xs:restriction>
-                      </xs:simpleType>
-                    </xs:element>
-                  </xs:sequence>
-                </xs:complexType>
-              </xs:element>
-              <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-                <xs:complexType>
-                  <xs:simpleContent>
-                    <xs:extension base="xs:token">
-                      <xs:attribute name="type" type="xs:token" use="required"/>
-                    </xs:extension>
-                  </xs:simpleContent>
-                </xs:complexType>
-              </xs:element>
-            </xs:sequence>
-          </xs:complexType>
-        </xs:element>
-        <xs:element name="classification" type="xs:token"/>
-        <xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0"/>
-        <xs:element name="structure" type="xs:token" minOccurs="0"/>
-        <xs:element name="synthetic_flag" type="xs:boolean" minOccurs="0"/>
-        <xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type protein_or_peptide_macromolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- protein_or_peptide_macromolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

protein_or_peptide

-

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , recombinant_expression{0,1} , synthetic_source{0,1} , enantiomer , sequence , ec_number*

-

Children

details, ec_number, enantiomer, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, recombinant_expression, sequence, synthetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="protein_or_peptide_macromolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_macromolecule_type">
-      <xs:sequence>
-        <xs:element name="recombinant_expression" type="recombinant_source_type" minOccurs="0"/>
-        <xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>
-        <xs:element name="enantiomer">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="LEVO"/>
-              <xs:enumeration value="DEXTRO"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:element>
-        <xs:element name="sequence">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="string" type="xs:token" minOccurs="0"/>
-              <xs:element name="discrepancy_list" minOccurs="0">
-                <xs:complexType>
-                  <xs:sequence>
-                    <xs:element name="discrepancy" maxOccurs="unbounded">
-                      <xs:simpleType>
-                        <xs:restriction base="xs:token">
-                          <xs:pattern value="[ARNDCEQGHILKMFPSTWYVUOBZJX]\d+[ARNDCEQGHILKMFPSTWYVUOBZJX]"/>
-                        </xs:restriction>
-                      </xs:simpleType>
-                    </xs:element>
-                  </xs:sequence>
-                </xs:complexType>
-              </xs:element>
-              <xs:element name="connectivity" minOccurs="0">
-                <xs:complexType>
-                  <xs:sequence>
-                    <xs:element minOccurs="0" name="_n-link">
-                      <xs:complexType>
-                        <xs:sequence>
-                          <xs:element name="molecule_id"/>
-                        </xs:sequence>
-                      </xs:complexType>
-                    </xs:element>
-                    <xs:element minOccurs="0" name="_c-link">
-                      <xs:complexType>
-                        <xs:sequence>
-                          <xs:element name="molecule_id"/>
-                        </xs:sequence>
-                      </xs:complexType>
-                    </xs:element>
-                  </xs:sequence>
-                </xs:complexType>
-              </xs:element>
-              <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-                <xs:complexType>
-                  <xs:simpleContent>
-                    <xs:extension base="xs:token">
-                      <xs:attribute name="type" use="required">
-                        <xs:simpleType>
-                          <xs:restriction base="xs:token">
-                            <xs:enumeration value="UNIPROTKB"/>
-                            <xs:enumeration value="UNIPARC"/>
-                            <xs:enumeration value="INTERPRO"/>
-                            <xs:enumeration value="GO"/>
-                            <xs:enumeration value="GENBANK"/>
-                          </xs:restriction>
-                        </xs:simpleType>
-                      </xs:attribute>
-                    </xs:extension>
-                  </xs:simpleContent>
-                </xs:complexType>
-              </xs:element>
-            </xs:sequence>
-          </xs:complexType>
-        </xs:element>
-        <xs:element name="ec_number" minOccurs="0" maxOccurs="unbounded">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:pattern value="([1-7]((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?[0-9]?)|(.-)))(([ ]*,[ ]*)([1-6]((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?[0-9]?)|(.-))))*"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:element>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type rna_macromolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- rna_macromolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

rna

-

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , sequence , classification{0,1} , structure{0,1} , synthetic_flag{0,1} , synthetic_source{0,1} , ec_number*

-

Children

classification, details, ec_number, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag, sequence, structure, synthetic_flag, synthetic_source

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="rna_macromolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_macromolecule_type">
-      <xs:sequence>
-        <xs:element name="sequence">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="string" type="xs:token"/>
-              <xs:element name="discrepancy_list" minOccurs="0">
-                <xs:complexType>
-                  <xs:sequence>
-                    <xs:element name="discrepancy" maxOccurs="unbounded">
-                      <xs:simpleType>
-                        <xs:restriction base="xs:token">
-                          <xs:pattern value="[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]\d+[ ARNDCEQGHILKMFPSTWYVUOBZJX\(\)]"/>
-                        </xs:restriction>
-                      </xs:simpleType>
-                    </xs:element>
-                  </xs:sequence>
-                </xs:complexType>
-              </xs:element>
-              <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-                <xs:complexType>
-                  <xs:simpleContent>
-                    <xs:extension base="xs:token">
-                      <xs:attribute name="type">
-                        <xs:simpleType>
-                          <xs:restriction base="xs:token">
-                            <xs:enumeration value="REFSEQ"/>
-                            <xs:enumeration value="GENBANK"/>
-                            <xs:enumeration value="UNIPROTKB"/>
-                            <xs:whiteSpace value="collapse"/>
-                          </xs:restriction>
-                        </xs:simpleType>
-                      </xs:attribute>
-                    </xs:extension>
-                  </xs:simpleContent>
-                </xs:complexType>
-              </xs:element>
-            </xs:sequence>
-          </xs:complexType>
-        </xs:element>
-        <xs:element name="classification" minOccurs="0">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="MESSENGER"/>
-              <xs:enumeration value="TRANSFER"/>
-              <xs:enumeration value="RIBOSOMAL"/>
-              <xs:enumeration value="NON-CODING"/>
-              <xs:enumeration value="INTERFERENCE"/>
-              <xs:enumeration value="SMALL INTERFERENCE"/>
-              <xs:enumeration value="GENOMIC"/>
-              <xs:enumeration value="PRE-MESSENGER"/>
-              <xs:enumeration value="SMALL NUCLEOLAR"/>
-              <xs:enumeration value="TRANSFER-MESSENGER"/>
-              <xs:enumeration value="OTHER"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:element>
-        <xs:element name="structure" type="xs:token" minOccurs="0"/>
-        <xs:element name="synthetic_flag" type="xs:boolean" minOccurs="0"/>
-        <xs:element name="synthetic_source" type="macromolecule_source_type" minOccurs="0"/>
-        <xs:element name="ec_number" minOccurs="0" maxOccurs="unbounded">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:pattern value="\d+(\.(\d+|\-)){3}"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:element>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type saccharide_macromolecule_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_macromolecule_type

Type hierarchy

-

base_macromolecule_type
- saccharide_macromolecule_type
-

-

-

Used by

-

-

-

- - - - - -

Element

saccharide

-

-

Model

-

-

name , natural_source{0,1} , molecular_weight{0,1} , details{0,1} , number_of_copies{0,1} , oligomeric_state{0,1} , recombinant_exp_flag{0,1} , enantiomer , formula{0,1} , external_references*

-

Children

details, enantiomer, external_references, formula, molecular_weight, name, natural_source, number_of_copies, oligomeric_state, recombinant_exp_flag

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

QName	Type	Use
chimera	xs:boolean	optional	- -
macromolecule_id	xs:positiveInteger	required	- -
mutant	xs:boolean	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="saccharide_macromolecule_type">
-  <xs:complexContent>
-    <xs:extension base="base_macromolecule_type">
-      <xs:sequence>
-        <xs:element name="enantiomer">
-          <xs:simpleType>
-            <xs:restriction base="xs:token">
-              <xs:enumeration value="LEVO"/>
-              <xs:enumeration value="DEXTRO"/>
-            </xs:restriction>
-          </xs:simpleType>
-        </xs:element>
-        <xs:element name="formula" type="formula_type" minOccurs="0"/>
-        <xs:element name="external_references" minOccurs="0" maxOccurs="unbounded">
-          <xs:complexType>
-            <xs:simpleContent>
-              <xs:extension base="xs:token">
-                <xs:attribute name="type">
-                  <xs:simpleType>
-                    <xs:restriction base="xs:token">
-                      <xs:enumeration value="CARDBANK"/>
-                      <xs:whiteSpace value="collapse"/>
-                    </xs:restriction>
-                  </xs:simpleType>
-                </xs:attribute>
-              </xs:extension>
-            </xs:simpleContent>
-          </xs:complexType>
-        </xs:element>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type crystallography_preparation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_preparation_type

Type hierarchy

-

base_preparation_type
- crystallography_preparation_type
-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_preparation

-

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1} , crystal_formation{0,1}

-

Children

buffer, concentration, crystal_formation, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="crystallography_preparation_type">
-  <xs:complexContent>
-    <xs:extension base="base_preparation_type">
-      <xs:sequence>
-        <xs:element name="crystal_formation" minOccurs="0">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="lipid_protein_ratio" type="xs:float" minOccurs="0"/>
-              <xs:element name="lipid_mixture" type="xs:token" minOccurs="0"/>
-              <xs:element name="instrument" type="xs:token" minOccurs="0"/>
-              <xs:element name="atmosphere" type="xs:token" minOccurs="0"/>
-              <xs:element name="temperature" type="crystal_formation_temperature_type" minOccurs="0"/>
-              <xs:element name="time" type="crystal_formation_time_type" minOccurs="0"/>
-              <xs:element name="details" type="xs:string" minOccurs="0"/>
-            </xs:sequence>
-          </xs:complexType>
-        </xs:element>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type crystal_formation_temperature_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_crystal_formation_temperature_type

Type hierarchy

-

xs:float
- allowed_crystal_formation_temperature_type
  - crystal_formation_temperature_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_preparation_type/crystal_formation/temperature

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	K	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="crystal_formation_temperature_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_crystal_formation_temperature_type">
-      <xs:attribute name="units" type="xs:token" fixed="K" use="required"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_crystal_formation_temperature_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	343	- -
minInclusive	270	- -

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

crystal_formation_temperature_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_crystal_formation_temperature_type">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="270"/>
-    <xs:maxInclusive value="343"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type crystal_formation_time_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of non_zero_float

Type hierarchy

-

xs:float
- non_zero_float
  - crystal_formation_time_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_preparation_type/crystal_formation/time

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
units	restriction of xs:token	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="crystal_formation_time_type">
-  <xs:simpleContent>
-    <xs:extension base="non_zero_float">
-      <xs:attribute name="units" use="required">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="MINUTE"/>
-            <xs:enumeration value="HOUR"/>
-            <xs:enumeration value="DAY"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:attribute>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type non_zero_float

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minExclusive

0

-

-

-

-

-

Used by

-

-

-

- - - - - - - - - -

Complex Type	crystal_formation_time_type
Elements	segment_selection_type/segment_length, segment_selection_type/segment_overlap, segment_selection_type/total_filament_length

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="non_zero_float">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type helical_preparation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_preparation_type

Type hierarchy

-

base_preparation_type
- helical_preparation_type
-

-

-

Used by

-

-

-

- - - - - -

Element

helical_preparation

-

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1}

-

Children

buffer, concentration, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="helical_preparation_type">
-  <xs:complexContent>
-    <xs:extension base="base_preparation_type"/>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type single_particle_preparation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_preparation_type

Type hierarchy

-

base_preparation_type
- single_particle_preparation_type
-

-

-

Used by

-

-

-

- - - - - -

Element

single_particle_preparation

-

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1}

-

Children

buffer, concentration, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="single_particle_preparation_type">
-  <xs:complexContent>
-    <xs:extension base="base_preparation_type"/>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type subtomogram_averaging_preparation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_preparation_type

Type hierarchy

-

base_preparation_type
- subtomogram_averaging_preparation_type
-

-

-

Used by

-

-

-

- - - - - -

Element

subtomogram_averaging_preparation

-

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1}

-

Children

buffer, concentration, details, grid, shadowing, staining, sugar_embedding, vitrification

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="subtomogram_averaging_preparation_type">
-  <xs:complexContent>
-    <xs:extension base="base_preparation_type"/>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type tomography_preparation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_preparation_type

Type hierarchy

-

base_preparation_type
- tomography_preparation_type
-

-

-

Used by

-

-

-

- - - - - -

Element

tomography_preparation

-

-

Model

-

-

concentration{0,1} , buffer{0,1} , staining{0,1} , sugar_embedding{0,1} , shadowing{0,1} , grid{0,1} , vitrification{0,1} , details{0,1} , fiducial_markers_list{0,1} , high_pressure_freezing{0,1} , embedding_material{0,1} , cryo_protectant{0,1} , sectioning{0,1}

-

Children

buffer, concentration, cryo_protectant, details, embedding_material, fiducial_markers_list, grid, high_pressure_freezing, sectioning, shadowing, staining, sugar_embedding, vitrification

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
preparation_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="tomography_preparation_type">
-  <xs:complexContent>
-    <xs:extension base="base_preparation_type">
-      <xs:sequence>
-        <xs:element name="fiducial_markers_list" minOccurs="0">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="fiducial_marker" type="fiducial_marker_type" maxOccurs="unbounded"/>
-            </xs:sequence>
-          </xs:complexType>
-        </xs:element>
-        <xs:element name="high_pressure_freezing" minOccurs="0">
-          <xs:complexType>
-            <xs:sequence>
-              <xs:element name="instrument">
-                <xs:simpleType>
-                  <xs:restriction base="xs:token">
-                    <xs:enumeration value="BAL-TEC HPM 010"/>
-                    <xs:enumeration value="EMS-002 RAPID IMMERSION FREEZER"/>
-                    <xs:enumeration value="LEICA EM HPM100"/>
-                    <xs:enumeration value="LEICA EM PACT"/>
-                    <xs:enumeration value="LEICA EM PACT2"/>
-                    <xs:enumeration value="OTHER"/>
-                  </xs:restriction>
-                </xs:simpleType>
-              </xs:element>
-              <xs:element name="details" type="xs:string" minOccurs="0"/>
-            </xs:sequence>
-          </xs:complexType>
-        </xs:element>
-        <xs:element name="embedding_material" type="xs:token" minOccurs="0"/>
-        <xs:element name="cryo_protectant" type="xs:token" minOccurs="0"/>
-        <xs:element name="sectioning" minOccurs="0">
-          <xs:complexType>
-            <xs:choice>
-              <xs:element name="ultramicrotomy">
-                <xs:complexType>
-                  <xs:sequence>
-                    <xs:element name="instrument" type="xs:token"/>
-                    <xs:element name="temperature" type="temperature_type"/>
-                    <xs:element name="final_thickness" type="ultramicrotomy_final_thickness_type"/>
-                    <xs:element name="details" type="xs:string" minOccurs="0"/>
-                  </xs:sequence>
-                </xs:complexType>
-              </xs:element>
-              <xs:element name="focused_ion_beam">
-                <xs:complexType>
-                  <xs:sequence>
-                    <xs:element name="instrument">
-                      <xs:simpleType>
-                        <xs:restriction base="xs:token">
-                          <xs:enumeration value="DB235"/>
-                          <xs:enumeration value="OTHER"/>
-                        </xs:restriction>
-                      </xs:simpleType>
-                    </xs:element>
-                    <xs:element name="ion">
-                      <xs:simpleType>
-                        <xs:restriction base="xs:token">
-                          <xs:enumeration value="GALLIUM+"/>
-                          <xs:enumeration value="OTHER"/>
-                        </xs:restriction>
-                      </xs:simpleType>
-                    </xs:element>
-                    <xs:element name="voltage" type="fib_voltage_type"/>
-                    <xs:element name="current" type="fib_current_type"/>
-                    <xs:element name="dose_rate" type="fib_dose_rate_type" minOccurs="0"/>
-                    <xs:element name="duration" type="fib_duration_type"/>
-                    <xs:element name="temperature" type="temperature_type"/>
-                    <xs:element name="initial_thickness" type="fib_initial_thickness_type"/>
-                    <xs:element name="final_thickness" type="fib_final_thickness_type"/>
-                    <xs:element name="details" type="xs:string" minOccurs="0"/>
-                  </xs:sequence>
-                </xs:complexType>
-              </xs:element>
-              <xs:element name="other_sectioning" type="xs:string"/>
-            </xs:choice>
-          </xs:complexType>
-        </xs:element>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type fiducial_marker_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

tomography_preparation_type/fiducial_markers_list/fiducial_marker

-

-

Model

-

-

fiducial_type{0,1} , manufacturer{0,1} , diameter

-

Children

diameter, fiducial_type, manufacturer

-

Source

-

-

-

- - - - -

-

<xs:complexType name="fiducial_marker_type">
-  <xs:sequence>
-    <xs:element name="fiducial_type" type="xs:token" minOccurs="0"/>
-    <xs:element name="manufacturer" type="xs:token" minOccurs="0"/>
-    <xs:element name="diameter" type="fiducial_marker_diameter_type"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type fiducial_marker_diameter_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_diameter_colloidal_gold

Type hierarchy

-

xs:float
- allowed_diameter_colloidal_gold
  - fiducial_marker_diameter_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

fiducial_marker_type/diameter

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	nanometer	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="fiducial_marker_diameter_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_diameter_colloidal_gold">
-      <xs:attribute name="units" type="xs:token" fixed="nanometer" use="required"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_diameter_colloidal_gold

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	100	- -
minInclusive	0.1	- -

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fiducial_marker_diameter_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_diameter_colloidal_gold">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0.1"/>
-    <xs:maxInclusive value="100"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type ultramicrotomy_final_thickness_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_microtome_thickness

Type hierarchy

-

xs:float
- allowed_microtome_thickness
  - ultramicrotomy_final_thickness_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

tomography_preparation_type/sectioning/ultramicrotomy/final_thickness

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
units	xs:token	nm	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="ultramicrotomy_final_thickness_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_microtome_thickness">
-      <xs:attribute default="nm" name="units" type="xs:token"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_microtome_thickness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minInclusive

4

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

ultramicrotomy_final_thickness_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_microtome_thickness">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="4"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type fib_voltage_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_focus_ion_voltage

Type hierarchy

-

xs:float
- allowed_focus_ion_voltage
  - fib_voltage_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

tomography_preparation_type/sectioning/focused_ion_beam/voltage

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		kV	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="fib_voltage_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_focus_ion_voltage">
-      <xs:attribute name="units" fixed="kV"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_focus_ion_voltage

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	50	- -
minInclusive	0.1	- -

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_voltage_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_focus_ion_voltage">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0.1"/>
-    <xs:maxInclusive value="50"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type fib_current_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_focus_ion_current

Type hierarchy

-

xs:float
- allowed_focus_ion_current
  - fib_current_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

tomography_preparation_type/sectioning/focused_ion_beam/current

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units		nA	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="fib_current_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_focus_ion_current">
-      <xs:attribute name="units" fixed="nA"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_focus_ion_current

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	200	- -
minInclusive	0.001	- -

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_current_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_focus_ion_current">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0.001"/>
-    <xs:maxInclusive value="200"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type fib_dose_rate_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_focus_ion_dose_rate

Type hierarchy

-

xs:float
- allowed_focus_ion_dose_rate
  - fib_dose_rate_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

tomography_preparation_type/sectioning/focused_ion_beam/dose_rate

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
units	xs:token	ions/(cm^2*s)	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="fib_dose_rate_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_focus_ion_dose_rate">
-      <xs:attribute name="units" type="xs:token" default="ions/(cm^2*s)"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_focus_ion_dose_rate

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minExclusive

0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_dose_rate_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_focus_ion_dose_rate">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type fib_duration_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of xs:float

-

Used by

-

-

-

- - - - - -

Element

tomography_preparation_type/sectioning/focused_ion_beam/duration

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Fixed	Use
units	xs:token	s	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="fib_duration_type">
-  <xs:simpleContent>
-    <xs:extension base="xs:float">
-      <xs:attribute name="units" type="xs:token" fixed="s"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Complex Type fib_initial_thickness_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_focus_ion_initial_thickness

Type hierarchy

-

xs:float
- allowed_focus_ion_initial_thickness
  - fib_initial_thickness_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

tomography_preparation_type/sectioning/focused_ion_beam/initial_thickness

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
units	xs:token	nm	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="fib_initial_thickness_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_focus_ion_initial_thickness">
-      <xs:attribute name="units" type="xs:token" default="nm"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_focus_ion_initial_thickness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	100000	- -
minInclusive	10	- -

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_initial_thickness_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_focus_ion_initial_thickness">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="10"/>
-    <xs:maxInclusive value="100000"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type fib_final_thickness_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of allowed_focus_ion_final_thickness

Type hierarchy

-

xs:float
- allowed_focus_ion_final_thickness
  - fib_final_thickness_type
  -
-

-

-

Used by

-

-

-

- - - - - -

Element

tomography_preparation_type/sectioning/focused_ion_beam/final_thickness

-

-

-

Attributes

-

-

-

- - - - - - - - - - - - - - - - - -

QName	Type	Default	Use
units	xs:token	nm	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="fib_final_thickness_type">
-  <xs:simpleContent>
-    <xs:extension base="allowed_focus_ion_final_thickness">
-      <xs:attribute name="units" type="xs:token" default="nm"/>
-    </xs:extension>
-  </xs:simpleContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_focus_ion_final_thickness

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minInclusive

10

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_final_thickness_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_focus_ion_final_thickness">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="10"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type crystallography_microscopy_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_microscopy_type

Type hierarchy

-

base_microscopy_type
- crystallography_microscopy_type
-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_microscopy

-

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1} , camera_length , (tilt_list{0,1} | tilt_series*)

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, camera_length, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min, tilt_list, tilt_series

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="crystallography_microscopy_type">
-  <xs:complexContent>
-    <xs:extension base="base_microscopy_type">
-      <xs:sequence>
-        <xs:element name="camera_length">
-          <xs:complexType>
-            <xs:simpleContent>
-              <xs:extension base="allowed_camera_length">
-                <xs:attribute name="units" type="xs:token" fixed="mm" use="required"/>
-              </xs:extension>
-            </xs:simpleContent>
-          </xs:complexType>
-        </xs:element>
-        <xs:choice>
-          <xs:element name="tilt_list" minOccurs="0">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element name="angle" maxOccurs="unbounded">
-                  <xs:simpleType>
-                    <xs:restriction base="xs:float">
-                      <xs:minInclusive value="-70"/>
-                      <xs:maxInclusive value="70"/>
-                    </xs:restriction>
-                  </xs:simpleType>
-                </xs:element>
-              </xs:sequence>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="tilt_series" type="tilt_series_type" minOccurs="0" maxOccurs="unbounded"/>
-        </xs:choice>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Simple Type allowed_camera_length

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	3000	- -
minInclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_microscopy_type/camera_length

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_camera_length">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0"/>
-    <xs:maxInclusive value="3000"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type tilt_series_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

crystallography_microscopy_type/tilt_series, tomography_microscopy_type/tilt_series

-

-

Model

-

-

axis1 , axis2{0,1} , axis_rotation{0,1}

-

Children

axis1, axis2, axis_rotation

-

Source

-

-

-

- - - - -

-

<xs:complexType name="tilt_series_type">
-  <xs:sequence>
-    <xs:element name="axis1" type="axis_type"/>
-    <xs:element name="axis2" minOccurs="0">
-      <xs:complexType>
-        <xs:complexContent>
-          <xs:extension base="axis_type">
-            <xs:sequence>
-              <xs:element name="axis_rotation" type="xs:float" minOccurs="0"/>
-            </xs:sequence>
-          </xs:extension>
-        </xs:complexContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="axis_rotation" fixed="90" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="xs:float">
-            <xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type axis_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

tilt_series_type/axis1, tilt_series_type/axis2

-

-

Model

-

-

min_angle{0,1} , max_angle{0,1} , angle_increment{0,1}

-

Children

angle_increment, max_angle, min_angle

-

Source

-

-

-

- - - - -

-

<xs:complexType name="axis_type">
-  <xs:sequence>
-    <xs:element name="min_angle" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_angle_tomography">
-            <xs:attribute name="units" fixed="deg" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="max_angle" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_angle_tomography">
-            <xs:attribute name="units" fixed="deg" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="angle_increment" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="allowed_angle_increment">
-            <xs:attribute name="units" fixed="deg" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type allowed_angle_tomography

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxExclusive	90	- -
minExclusive	-90	- -

-

-

-

Used by

-

-

-

- - - - - -

Elements

axis_type/max_angle, axis_type/min_angle

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_angle_tomography">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="-90"/>
-    <xs:maxExclusive value="90"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_angle_increment

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxExclusive	15	- -
minExclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

axis_type/angle_increment

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_angle_increment">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-    <xs:maxExclusive value="15"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type helical_microscopy_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_microscopy_type

Type hierarchy

-

base_microscopy_type
- helical_microscopy_type
-

-

-

Used by

-

-

-

- - - - - -

Element

helical_microscopy

-

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1}

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="helical_microscopy_type">
-  <xs:complexContent>
-    <xs:extension base="base_microscopy_type"/>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type single_particle_microscopy_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_microscopy_type

Type hierarchy

-

base_microscopy_type
- single_particle_microscopy_type
-

-

-

Used by

-

-

-

- - - - - -

Element

single_particle_microscopy

-

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1}

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="single_particle_microscopy_type">
-  <xs:complexContent>
-    <xs:extension base="base_microscopy_type"/>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type tomography_microscopy_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_microscopy_type

Type hierarchy

-

base_microscopy_type
- tomography_microscopy_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

subtomogram_averaging_microscopy, tomography_microscopy

-

-

Model

-

-

specimen_preparations{0,1} , microscope , illumination_mode , imaging_mode , electron_source , acceleration_voltage , c2_aperture_diameter{0,1} , nominal_cs{0,1} , nominal_defocus_min{0,1} , calibrated_defocus_min{0,1} , nominal_defocus_max{0,1} , calibrated_defocus_max{0,1} , nominal_magnification{0,1} , calibrated_magnification{0,1} , specimen_holder_model{0,1} , cooling_holder_cryogen{0,1} , temperature{0,1} , alignment_procedure{0,1} , specialist_optics{0,1} , software_list{0,1} , details{0,1} , date{0,1} , image_recording_list , specimen_holder{0,1} , tilt_angle_min{0,1} , tilt_angle_max{0,1} , tilt_series*

-

Children

acceleration_voltage, alignment_procedure, c2_aperture_diameter, calibrated_defocus_max, calibrated_defocus_min, calibrated_magnification, cooling_holder_cryogen, date, details, electron_source, illumination_mode, image_recording_list, imaging_mode, microscope, nominal_cs, nominal_defocus_max, nominal_defocus_min, nominal_magnification, software_list, specialist_optics, specimen_holder, specimen_holder_model, specimen_preparations, temperature, tilt_angle_max, tilt_angle_min, tilt_series

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
microscopy_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="tomography_microscopy_type">
-  <xs:complexContent>
-    <xs:extension base="base_microscopy_type">
-      <xs:sequence>
-        <xs:element name="tilt_series" type="tilt_series_type" minOccurs="0" maxOccurs="unbounded"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type crystallography_processing_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_image_processing_type

Type hierarchy

-

base_image_processing_type
- crystallography_processing_type
-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_processing

-

-

Model

-

-

image_recording_id , details{0,1} , final_reconstruction{0,1} , crystal_parameters{0,1} , startup_model* , ctf_correction{0,1} , molecular_replacement{0,1} , lattice_distortion_correction_software_list{0,1} , symmetry_determination_software_list{0,1} , merging_software_list{0,1} , crystallography_statistics{0,1}

-

Children

crystal_parameters, crystallography_statistics, ctf_correction, details, final_reconstruction, image_recording_id, lattice_distortion_correction_software_list, merging_software_list, molecular_replacement, startup_model, symmetry_determination_software_list

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="crystallography_processing_type">
-  <xs:complexContent>
-    <xs:extension base="base_image_processing_type">
-      <xs:group ref="crystallography_proc_add_group"/>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type non_subtom_final_reconstruction_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of final_reconstruction_type

Type hierarchy

-

final_reconstruction_type
- non_subtom_final_reconstruction_type
-

-

-

Used by

-

-

-

- - - - - -

Elements

crystallography_proc_add_group/final_reconstruction, helical_processing_add_group/final_reconstruction, single_particle_proc_add_group/final_reconstruction, tomography_proc_add_group/final_reconstruction

-

-

Model

-

-

number_classes_used{0,1} , applied_symmetry{0,1} , algorithm{0,1} , resolution{0,1} , resolution_method{0,1} , reconstruction_filtering{0,1} , software_list{0,1} , details{0,1} , number_images_used{0,1}

-

Children

algorithm, applied_symmetry, details, number_classes_used, number_images_used, reconstruction_filtering, resolution, resolution_method, software_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="non_subtom_final_reconstruction_type">
-  <xs:complexContent>
-    <xs:extension base="final_reconstruction_type">
-      <xs:sequence>
-        <xs:element name="number_images_used" type="xs:positiveInteger" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type final_reconstruction_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Complex Types

non_subtom_final_reconstruction_type, subtomogram_final_reconstruction_type

-

-

Model

-

-

number_classes_used{0,1} , applied_symmetry{0,1} , algorithm{0,1} , resolution{0,1} , resolution_method{0,1} , reconstruction_filtering{0,1} , software_list{0,1} , details{0,1}

-

Children

algorithm, applied_symmetry, details, number_classes_used, reconstruction_filtering, resolution, resolution_method, software_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="final_reconstruction_type">
-  <xs:sequence>
-    <xs:element name="number_classes_used" type="xs:positiveInteger" minOccurs="0"/>
-    <xs:element name="applied_symmetry" type="applied_symmetry_type" minOccurs="0"/>
-    <xs:element name="algorithm" type="reconstruction_algorithm_type" minOccurs="0"/>
-    <xs:element name="resolution" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="resolution_type">
-            <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-            <xs:attribute name="res_type" use="required">
-              <xs:simpleType>
-                <xs:restriction base="xs:token">
-                  <xs:enumeration value="BY AUTHOR"/>
-                </xs:restriction>
-              </xs:simpleType>
-            </xs:attribute>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="resolution_method" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="DIFFRACTION PATTERN/LAYERLINES"/>
-          <xs:enumeration value="FSC 0.143 CUT-OFF"/>
-          <xs:enumeration value="FSC 0.33 CUT-OFF"/>
-          <xs:enumeration value="FSC 0.5 CUT-OFF"/>
-          <xs:enumeration value="FSC 1/2 BIT CUT-OFF"/>
-          <xs:enumeration value="FSC 3 SIGMA CUT-OFF"/>
-          <xs:enumeration value="OTHER"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="reconstruction_filtering" type="reconstruction_filtering_type" minOccurs="0"/>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type reconstruction_algorithm_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:token

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	ALGEBRAIC (ARTS)	- -
enumeration	BACK PROJECTION	- -
enumeration	EXACT BACK PROJECTION	- -
enumeration	FOURIER SPACE	- -
enumeration	SIMULTANEOUS ITERATIVE (SIRT)	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

final_reconstruction_type/algorithm

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="reconstruction_algorithm_type">
-  <xs:restriction base="xs:token">
-    <xs:enumeration value="ALGEBRAIC (ARTS)"/>
-    <xs:enumeration value="BACK PROJECTION"/>
-    <xs:enumeration value="EXACT BACK PROJECTION"/>
-    <xs:enumeration value="FOURIER SPACE"/>
-    <xs:enumeration value="SIMULTANEOUS ITERATIVE (SIRT)"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type resolution_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minExclusive

0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Elements

crystallography_statistics_type/high_resolution, crystallography_statistics_type/shell_list/shell/high_resolution, crystallography_statistics_type/shell_list/shell/low_resolution, final_reconstruction_type/resolution, molecular_replacement_type/resolution_range/high_resolution, molecular_replacement_type/resolution_range/low_resolution

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="resolution_type">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type reconstruction_filtering_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

final_reconstruction_type/reconstruction_filtering

-

-

Model

-

-

background_masked{0,1} , spatial_filtering{0,1} , sharpening{0,1} , b-factorSharpening{0,1} , other{0,1}

-

Children

b-factorSharpening, background_masked, other, sharpening, spatial_filtering

-

Source

-

-

-

- - - - -

-

<xs:complexType name="reconstruction_filtering_type">
-  <xs:sequence>
-    <xs:element name="background_masked" type="background_masked_type" minOccurs="0"/>
-    <xs:element name="spatial_filtering" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="low_frequency_cutoff">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="xs:float">
-                  <xs:attribute name="units" fixed="1/Å" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="high_frequency_cutoff">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="xs:float">
-                  <xs:attribute name="units" fixed="1/Å" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="filter_function" type="xs:token"/>
-          <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="sharpening" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="b-factorSharpening" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="_brestore">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="allowed_brestore_type">
-                  <xs:attribute name="units" type="xs:token" fixed="Å^2" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="other" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type background_masked_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

reconstruction_filtering_type/background_masked

-

-

Model

-

-

geometrical_shape , dimensions{0,1} , software_list{0,1} , details{0,1}

-

Children

details, dimensions, geometrical_shape, software_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="background_masked_type">
-  <xs:sequence>
-    <xs:element name="geometrical_shape">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="SPHERE"/>
-          <xs:enumeration value="SOFT SPHERE"/>
-          <xs:enumeration value="GAUSSIAN"/>
-          <xs:enumeration value="CIRCLE"/>
-          <xs:enumeration value="RECTANGLE"/>
-          <xs:enumeration value="CYLINDER"/>
-          <xs:enumeration value="OTHER"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element minOccurs="0" name="dimensions">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element minOccurs="0" name="radius">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="xs:float">
-                  <xs:attribute name="units" use="required">
-                    <xs:simpleType>
-                      <xs:restriction base="xs:token">
-                        <xs:enumeration value="PIXEL"/>
-                        <xs:enumeration value="Å"/>
-                      </xs:restriction>
-                    </xs:simpleType>
-                  </xs:attribute>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="width">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="xs:float">
-                  <xs:attribute name="units" use="required">
-                    <xs:simpleType>
-                      <xs:restriction base="xs:token">
-                        <xs:enumeration value="PIXEL"/>
-                        <xs:enumeration value="Å"/>
-                      </xs:restriction>
-                    </xs:simpleType>
-                  </xs:attribute>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="height">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="xs:float">
-                  <xs:attribute name="units" use="required">
-                    <xs:simpleType>
-                      <xs:restriction base="xs:token">
-                        <xs:enumeration value="PIXEL"/>
-                        <xs:enumeration value="Å"/>
-                      </xs:restriction>
-                    </xs:simpleType>
-                  </xs:attribute>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="depth">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="xs:float">
-                  <xs:attribute name="units" use="required">
-                    <xs:simpleType>
-                      <xs:restriction base="xs:token">
-                        <xs:enumeration value="PIXEL"/>
-                        <xs:enumeration value="Å"/>
-                      </xs:restriction>
-                    </xs:simpleType>
-                  </xs:attribute>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type allowed_brestore_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxExclusive	0	- -
minExclusive	-1000	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

reconstruction_filtering_type/b-factorSharpening/_brestore

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_brestore_type">
-  <xs:restriction base="xs:float">
-    <xs:maxExclusive value="0"/>
-    <xs:minExclusive value="-1000"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type crystal_parameters_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

crystallography_proc_add_group/crystal_parameters, helical_processing_add_group/crystal_parameters, subtomogram_averaging_proc_add_group/crystal_parameters, tomography_proc_add_group/crystal_parameters

-

-

Model

-

-

unit_cell , (plane_group | space_group)

-

Children

plane_group, space_group, unit_cell

-

Source

-

-

-

- - - - -

-

<xs:complexType name="crystal_parameters_type">
-  <xs:sequence>
-    <xs:element name="unit_cell" type="unit_cell_type"/>
-    <xs:choice>
-      <xs:element name="plane_group">
-        <xs:simpleType>
-          <xs:restriction base="xs:token">
-            <xs:enumeration value="C 1 2"/>
-            <xs:enumeration value="C 2 2 2"/>
-            <xs:enumeration value="P 1"/>
-            <xs:enumeration value="P 1 2"/>
-            <xs:enumeration value="P 1 21"/>
-            <xs:enumeration value="P 2"/>
-            <xs:enumeration value="P 2 2 2"/>
-            <xs:enumeration value="P 2 2 21"/>
-            <xs:enumeration value="P 2 21 21"/>
-            <xs:enumeration value="P 3"/>
-            <xs:enumeration value="P 3 1 2"/>
-            <xs:enumeration value="P 3 2 1"/>
-            <xs:enumeration value="P 4"/>
-            <xs:enumeration value="P 4 2 2"/>
-            <xs:enumeration value="P 4 21 2"/>
-            <xs:enumeration value="P 6"/>
-            <xs:enumeration value="P 6 2 2"/>
-          </xs:restriction>
-        </xs:simpleType>
-      </xs:element>
-      <xs:element name="space_group" type="xs:token"/>
-    </xs:choice>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type unit_cell_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

crystal_parameters_type/unit_cell

-

-

Model

-

-

a , b , c , c_sampling_length{0,1} , gamma , alpha{0,1} , beta{0,1}

-

Children

a, alpha, b, beta, c, c_sampling_length, gamma

-

Source

-

-

-

- - - - -

-

<xs:complexType name="unit_cell_type">
-  <xs:sequence>
-    <xs:element name="a" type="cell_type"/>
-    <xs:element name="b" type="cell_type"/>
-    <xs:element name="c" type="cell_type"/>
-    <xs:element name="c_sampling_length" type="cell_type" minOccurs="0"/>
-    <xs:element name="gamma" type="cell_angle_type"/>
-    <xs:element name="alpha" type="cell_angle_type" minOccurs="0"/>
-    <xs:element name="beta" type="cell_angle_type" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type starting_map_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

crystallography_proc_add_group/startup_model, helical_processing_add_group/startup_model, refinement_type/startup_model, single_particle_proc_add_group/startup_model

-

-

Model

-

-

(random_conical_tilt{0,1} | orthogonal_tilt{0,1} | emdb_id{0,1} | pdb_model{0,1} | insilico_model{0,1} | other{0,1}) , details{0,1}

-

Children

details, emdb_id, insilico_model, orthogonal_tilt, other, pdb_model, random_conical_tilt

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
type_of_model	xs:token	optional	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="starting_map_type">
-  <xs:sequence>
-    <xs:choice>
-      <xs:element name="random_conical_tilt" minOccurs="0">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="number_images" type="xs:positiveInteger" minOccurs="0"/>
-            <xs:element name="tilt_angle" minOccurs="0">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="allowed_tilt_angle_random_conical">
-                    <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-            <xs:element name="details" type="xs:string" minOccurs="0"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="orthogonal_tilt" minOccurs="0">
-        <xs:complexType>
-          <xs:sequence>
-            <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-            <xs:element name="number_images" type="xs:positiveInteger" minOccurs="0"/>
-            <xs:element name="tilt_angle1" minOccurs="0">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="allowed_tilt_angle1Orthogonal">
-                    <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="tilt_angle2" minOccurs="0">
-              <xs:complexType>
-                <xs:simpleContent>
-                  <xs:extension base="allowed_tilt_angle2Orthogonal">
-                    <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-                  </xs:extension>
-                </xs:simpleContent>
-              </xs:complexType>
-            </xs:element>
-            <xs:element name="details" type="xs:string" minOccurs="0"/>
-          </xs:sequence>
-        </xs:complexType>
-      </xs:element>
-      <xs:element name="emdb_id" type="emdb_id_type" minOccurs="0"/>
-      <xs:element name="pdb_model" type="pdb_model_type" minOccurs="0"/>
-      <xs:element name="insilico_model" type="xs:token" minOccurs="0"/>
-      <xs:element name="other" type="xs:string" minOccurs="0"/>
-    </xs:choice>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-  <xs:attribute name="type_of_model" type="xs:token"/>
-</xs:complexType>

-

-

-

-

Simple Type allowed_tilt_angle_random_conical

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	180	- -
minInclusive	0	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

starting_map_type/random_conical_tilt/tilt_angle

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_tilt_angle_random_conical">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="0"/>
-    <xs:maxInclusive value="180"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_tilt_angle1Orthogonal

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	-30	- -
minInclusive	-50	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

starting_map_type/orthogonal_tilt/tilt_angle1

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_tilt_angle1Orthogonal">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="-50"/>
-    <xs:maxInclusive value="-30"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Simple Type allowed_tilt_angle2Orthogonal

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - - - - - - -

maxInclusive	50	- -
minInclusive	30	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

starting_map_type/orthogonal_tilt/tilt_angle2

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_tilt_angle2Orthogonal">
-  <xs:restriction base="xs:float">
-    <xs:minInclusive value="30"/>
-    <xs:maxInclusive value="50"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type pdb_model_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

starting_map_type/pdb_model

-

-

Model

-

-

pdb_id{0,1} , chain_id_list{0,1}

-

Children

chain_id_list, pdb_id

-

Source

-

-

-

- - - - -

-

<xs:complexType name="pdb_model_type">
-  <xs:sequence>
-    <xs:element name="pdb_id" type="pdb_code_type" minOccurs="0"/>
-    <xs:element name="chain_id_list" type="chain_type" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type ctf_correction_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

crystallography_proc_add_group/ctf_correction, helical_processing_add_group/ctf_correction, single_particle_proc_add_group/ctf_correction, subtomogram_averaging_proc_add_group/ctf_correction, tomography_proc_add_group/ctf_correction

-

-

Model

-

-

phase_reversal{0,1} , amplitude_correction{0,1} , correction_operation{0,1} , software_list{0,1} , details{0,1}

-

Children

amplitude_correction, correction_operation, details, phase_reversal, software_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="ctf_correction_type">
-  <xs:sequence>
-    <xs:element name="phase_reversal" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="anisotropic" type="xs:boolean" minOccurs="0"/>
-          <xs:element name="correction_space" type="correction_space_type" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="amplitude_correction" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="factor" type="xs:float" minOccurs="0"/>
-          <xs:element name="correction_space" type="correction_space_type" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="correction_operation" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:string">
-          <xs:enumeration value="MULTIPLICATION"/>
-          <xs:enumeration value="DIVISION"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type correction_space_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:string

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	REAL	- -
enumeration	RECIPROCAL	- -

-

-

-

Used by

-

-

-

- - - - - -

Elements

ctf_correction_type/amplitude_correction/correction_space, ctf_correction_type/phase_reversal/correction_space

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="correction_space_type">
-  <xs:restriction base="xs:string">
-    <xs:enumeration value="REAL"/>
-    <xs:enumeration value="RECIPROCAL"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type molecular_replacement_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_proc_add_group/molecular_replacement

-

-

Model

-

-

starting_model* , resolution_range{0,1} , software_list{0,1}

-

Children

resolution_range, software_list, starting_model

-

Source

-

-

-

- - - - -

-

<xs:complexType name="molecular_replacement_type">
-  <xs:sequence>
-    <xs:element name="starting_model" minOccurs="0" maxOccurs="unbounded">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="access_code" type="pdb_code_type"/>
-          <xs:element name="chain" type="chain_type" minOccurs="0" maxOccurs="unbounded"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="resolution_range" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="high_resolution">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="resolution_type">
-                  <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="low_resolution">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="resolution_type">
-                  <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type crystallography_statistics_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_proc_add_group/crystallography_statistics

-

-

Model

-

-

number_intensities_measured , number_structure_factors , fourier_space_coverage , r_sym{0,1} , r_merge , overall_phase_error{0,1} , overall_phase_residual{0,1} , phase_error_rejection_criteria , high_resolution , shell_list{0,1} , details{0,1}

-

Children

details, fourier_space_coverage, high_resolution, number_intensities_measured, number_structure_factors, overall_phase_error, overall_phase_residual, phase_error_rejection_criteria, r_merge, r_sym, shell_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="crystallography_statistics_type">
-  <xs:sequence>
-    <xs:element name="number_intensities_measured" type="xs:positiveInteger"/>
-    <xs:element name="number_structure_factors" type="xs:positiveInteger"/>
-    <xs:element name="fourier_space_coverage" type="xs:float"/>
-    <xs:element name="r_sym" type="xs:float" minOccurs="0"/>
-    <xs:element name="r_merge" type="xs:float"/>
-    <xs:element name="overall_phase_error" type="xs:token" minOccurs="0"/>
-    <xs:element name="overall_phase_residual" type="xs:float" minOccurs="0"/>
-    <xs:element name="phase_error_rejection_criteria" type="xs:token"/>
-    <xs:element name="high_resolution">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="resolution_type">
-            <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="shell_list" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="shell" maxOccurs="unbounded">
-            <xs:complexType>
-              <xs:sequence>
-                <xs:element name="high_resolution">
-                  <xs:complexType>
-                    <xs:simpleContent>
-                      <xs:extension base="resolution_type">
-                        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-                      </xs:extension>
-                    </xs:simpleContent>
-                  </xs:complexType>
-                </xs:element>
-                <xs:element name="low_resolution">
-                  <xs:complexType>
-                    <xs:simpleContent>
-                      <xs:extension base="resolution_type">
-                        <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-                      </xs:extension>
-                    </xs:simpleContent>
-                  </xs:complexType>
-                </xs:element>
-                <xs:element name="number_structure_factors" type="xs:positiveInteger"/>
-                <xs:element name="phase_residual" type="xs:float"/>
-                <xs:element name="fourier_space_coverage" type="xs:float"/>
-                <xs:element name="multiplicity" type="xs:float"/>
-              </xs:sequence>
-              <xs:attribute name="shell_id" type="xs:positiveInteger"/>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type helical_processing_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_image_processing_type

Type hierarchy

-

base_image_processing_type
- helical_processing_type
-

-

-

Used by

-

-

-

- - - - - -

Element

helical_processing

-

-

Model

-

-

image_recording_id , details{0,1} , final_reconstruction{0,1} , ctf_correction{0,1} , segment_selection* , refinement{0,1} , startup_model* , helical_layer_lines{0,1} , initial_angle_assignment{0,1} , final_angle_assignment{0,1} , crystal_parameters{0,1}

-

Children

crystal_parameters, ctf_correction, details, final_angle_assignment, final_reconstruction, helical_layer_lines, image_recording_id, initial_angle_assignment, refinement, segment_selection, startup_model

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="helical_processing_type">
-  <xs:complexContent>
-    <xs:extension base="base_image_processing_type">
-      <xs:group ref="helical_processing_add_group"/>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type segment_selection_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

helical_processing_add_group/segment_selection

-

-

Model

-

-

number_selected{0,1} , segment_length{0,1} , segment_overlap{0,1} , total_filament_length{0,1} , software_list{0,1} , details{0,1}

-

Children

details, number_selected, segment_length, segment_overlap, software_list, total_filament_length

-

Source

-

-

-

- - - - -

-

<xs:complexType name="segment_selection_type">
-  <xs:sequence>
-    <xs:element name="number_selected" type="xs:positiveInteger" minOccurs="0"/>
-    <xs:element name="segment_length" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="non_zero_float">
-            <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="segment_overlap" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="non_zero_float">
-            <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="total_filament_length" minOccurs="0">
-      <xs:complexType>
-        <xs:simpleContent>
-          <xs:extension base="non_zero_float">
-            <xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>
-          </xs:extension>
-        </xs:simpleContent>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type refinement_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

helical_processing_add_group/refinement

-

-

Model

-

-

startup_model* , starting_symmetry+ , software_list{0,1} , details{0,1}

-

Children

details, software_list, starting_symmetry, startup_model

-

Source

-

-

-

- - - - -

-

<xs:complexType name="refinement_type">
-  <xs:sequence>
-    <xs:element name="startup_model" type="starting_map_type" minOccurs="0" maxOccurs="unbounded"/>
-    <xs:element name="starting_symmetry" maxOccurs="unbounded">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="helical_parameters" type="helical_parameters_type"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type layer_lines_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

helical_processing_add_group/helical_layer_lines

-

-

Model

-

-

number_helices , helix_length , straightening{0,1} , indexing

-

Children

helix_length, indexing, number_helices, straightening

-

Source

-

-

-

- - - - -

-

<xs:complexType name="layer_lines_type">
-  <xs:sequence>
-    <xs:element name="number_helices"/>
-    <xs:element name="helix_length">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="min"/>
-          <xs:element name="max"/>
-          <xs:element name="average"/>
-          <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="straightening" type="xs:boolean" minOccurs="0"/>
-    <xs:element name="indexing">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type angle_assignment_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

helical_processing_add_group/final_angle_assignment, helical_processing_add_group/initial_angle_assignment, single_particle_proc_add_group/final_angle_assignment, single_particle_proc_add_group/initial_angle_assignment, subtomogram_averaging_proc_add_group/final_angle_assignment

-

-

Model

-

-

type , projection_matching_processing{0,1} , software_list{0,1} , details{0,1}

-

Children

details, projection_matching_processing, software_list, type

-

Source

-

-

-

- - - - -

-

<xs:complexType name="angle_assignment_type">
-  <xs:sequence>
-    <xs:element name="type">
-      <xs:simpleType>
-        <xs:restriction base="xs:token">
-          <xs:enumeration value="ANGULAR RECONSTITUTION"/>
-          <xs:enumeration value="COMMON LINE"/>
-          <xs:enumeration value="NOT APPLICABLE"/>
-          <xs:enumeration value="OTHER"/>
-          <xs:enumeration value="PROJECTION MATCHING"/>
-          <xs:enumeration value="RANDOM ASSIGNMENT"/>
-          <xs:enumeration value="MAXIMUM LIKELIHOOD"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="projection_matching_processing" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="number_reference_projections" type="xs:positiveInteger" minOccurs="0"/>
-          <xs:element name="merit_function" type="xs:token" minOccurs="0"/>
-          <xs:element name="angular_sampling" minOccurs="0">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="allowed_angular_sampling">
-                  <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Simple Type allowed_angular_sampling

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

restriction of xs:float

-

Facets

-

-

-

- - - - - - -

minExclusive

0

-

-

-

-

-

Used by

-

-

-

- - - - - -

Elements

angle_assignment_type/projection_matching_processing/angular_sampling, single_particle_proc_add_group/final_multi_reference_alignment/angular_sampling

-

-

-

Source

-

-

-

- - - - -

-

<xs:simpleType name="allowed_angular_sampling">
-  <xs:restriction base="xs:float">
-    <xs:minExclusive value="0"/>
-  </xs:restriction>
-</xs:simpleType>

-

-

-

-

Complex Type singleparticle_processing_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_image_processing_type

Type hierarchy

-

base_image_processing_type
- singleparticle_processing_type
-

-

-

Used by

-

-

-

- - - - - -

Element

singleparticle_processing

-

-

Model

-

-

image_recording_id , details{0,1} , particle_selection* , ctf_correction{0,1} , startup_model* , final_reconstruction{0,1} , initial_angle_assignment{0,1} , final_angle_assignment{0,1} , final_multi_reference_alignment{0,1} , final_two_d_classification{0,1} , final_three_d_classification{0,1}

-

Children

ctf_correction, details, final_angle_assignment, final_multi_reference_alignment, final_reconstruction, final_three_d_classification, final_two_d_classification, image_recording_id, initial_angle_assignment, particle_selection, startup_model

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="singleparticle_processing_type">
-  <xs:complexContent>
-    <xs:extension base="base_image_processing_type">
-      <xs:group ref="single_particle_proc_add_group"/>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type particle_selection_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Element

single_particle_proc_add_group/particle_selection

-

-

Model

-

-

number_selected{0,1} , reference_model{0,1} , method{0,1} , software_list{0,1} , details{0,1}

-

Children

details, method, number_selected, reference_model, software_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="particle_selection_type">
-  <xs:sequence>
-    <xs:element name="number_selected" type="xs:positiveInteger" minOccurs="0"/>
-    <xs:element name="reference_model" type="xs:token" minOccurs="0"/>
-    <xs:element name="method" type="xs:string" minOccurs="0"/>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type classification_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Elements

single_particle_proc_add_group/final_three_d_classification, single_particle_proc_add_group/final_two_d_classification, subtomogram_averaging_proc_add_group/final_three_d_classification

-

-

Model

-

-

number_classes{0,1} , average_number_members_per_class{0,1} , software_list{0,1} , details{0,1}

-

Children

average_number_members_per_class, details, number_classes, software_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="classification_type">
-  <xs:sequence>
-    <xs:element name="number_classes" type="xs:positiveInteger" minOccurs="0"/>
-    <xs:element name="average_number_members_per_class" minOccurs="0">
-      <xs:simpleType>
-        <xs:restriction base="xs:float">
-          <xs:minExclusive value="0"/>
-        </xs:restriction>
-      </xs:simpleType>
-    </xs:element>
-    <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="details" type="xs:string" minOccurs="0"/>
-  </xs:sequence>
-</xs:complexType>

-

-

-

-

Complex Type subtomogram_averaging_processing_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_image_processing_type

Type hierarchy

-

base_image_processing_type
- subtomogram_averaging_processing_type
-

-

-

Used by

-

-

-

- - - - - -

Element

subtomogram_averaging_processing

-

-

Model

-

-

image_recording_id , details{0,1} , final_reconstruction{0,1} , extraction , ctf_correction{0,1} , final_multi_reference_alignment{0,1} , final_three_d_classification{0,1} , final_angle_assignment{0,1} , crystal_parameters{0,1}

-

Children

crystal_parameters, ctf_correction, details, extraction, final_angle_assignment, final_multi_reference_alignment, final_reconstruction, final_three_d_classification, image_recording_id

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="subtomogram_averaging_processing_type">
-  <xs:complexContent>
-    <xs:extension base="base_image_processing_type">
-      <xs:group ref="subtomogram_averaging_proc_add_group"/>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type subtomogram_final_reconstruction_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of final_reconstruction_type

Type hierarchy

-

final_reconstruction_type
- subtomogram_final_reconstruction_type
-

-

-

Used by

-

-

-

- - - - - -

Element

subtomogram_averaging_proc_add_group/final_reconstruction

-

-

Model

-

-

number_classes_used{0,1} , applied_symmetry{0,1} , algorithm{0,1} , resolution{0,1} , resolution_method{0,1} , reconstruction_filtering{0,1} , software_list{0,1} , details{0,1} , number_subtomograms_used{0,1}

-

Children

algorithm, applied_symmetry, details, number_classes_used, number_subtomograms_used, reconstruction_filtering, resolution, resolution_method, software_list

-

Source

-

-

-

- - - - -

-

<xs:complexType name="subtomogram_final_reconstruction_type">
-  <xs:complexContent>
-    <xs:extension base="final_reconstruction_type">
-      <xs:sequence>
-        <xs:element name="number_subtomograms_used" type="xs:positiveInteger" minOccurs="0"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type tomography_processing_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of base_image_processing_type

Type hierarchy

-

base_image_processing_type
- tomography_processing_type
-

-

-

Used by

-

-

-

- - - - - -

Element

tomography_processing

-

-

Model

-

-

image_recording_id , details{0,1} , final_reconstruction{0,1} , series_aligment_software_list{0,1} , ctf_correction{0,1} , crystal_parameters{0,1}

-

Children

crystal_parameters, ctf_correction, details, final_reconstruction, image_recording_id, series_aligment_software_list

-

Attributes

-

-

-

- - - - - - - - - - - - - - - -

QName	Type	Use
image_processing_id	xs:positiveInteger	required	- -

-

-

-

Source

-

-

-

- - - - -

-

<xs:complexType name="tomography_processing_type">
-  <xs:complexContent>
-    <xs:extension base="base_image_processing_type">
-      <xs:group ref="tomography_proc_add_group"/>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type crystallography_validation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of validation_type

Type hierarchy

-

validation_type
- crystallography_validation_type
-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_validation

-

-

Model

-

-

file , details{0,1} , parallel_resolution , perpendicular_resolution , number_observed_reflections , number_unique_reflections , weighted_phase_residual , weighted_r_factor , data_completeness

-

Children

data_completeness, details, file, number_observed_reflections, number_unique_reflections, parallel_resolution, perpendicular_resolution, weighted_phase_residual, weighted_r_factor

-

Source

-

-

-

- - - - -

-

<xs:complexType name="crystallography_validation_type">
-  <xs:complexContent>
-    <xs:extension base="validation_type">
-      <xs:sequence>
-        <xs:element name="parallel_resolution"/>
-        <xs:element name="perpendicular_resolution"/>
-        <xs:element name="number_observed_reflections"/>
-        <xs:element name="number_unique_reflections"/>
-        <xs:element name="weighted_phase_residual"/>
-        <xs:element name="weighted_r_factor"/>
-        <xs:element name="data_completeness"/>
-      </xs:sequence>
-    </xs:extension>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type fsc_curve_validation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of validation_type

Type hierarchy

-

validation_type
- fsc_curve_validation_type
-

-

-

Used by

-

-

-

- - - - - -

Element

fsc_curve

-

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Source

-

-

-

- - - - -

-

<xs:complexType name="fsc_curve_validation_type">
-  <xs:complexContent>
-    <xs:extension base="validation_type"/>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type layer_lines_validation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of validation_type

Type hierarchy

-

validation_type
- layer_lines_validation_type
-

-

-

Used by

-

-

-

- - - - - -

Element

layer_lines

-

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Source

-

-

-

- - - - -

-

<xs:complexType name="layer_lines_validation_type">
-  <xs:complexContent>
-    <xs:extension base="validation_type"/>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Complex Type structure_factors_validation_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

Type

extension of validation_type

Type hierarchy

-

validation_type
- structure_factors_validation_type
-

-

-

Used by

-

-

-

- - - - - -

Element

structure_factors

-

-

Model

-

-

file , details{0,1}

-

Children

details, file

-

Source

-

-

-

- - - - -

-

<xs:complexType name="structure_factors_validation_type">
-  <xs:complexContent>
-    <xs:extension base="validation_type"/>
-  </xs:complexContent>
-</xs:complexType>

-

-

-

-

Attribute code_type / @superseded

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

code_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="superseded" type="xs:boolean"/>

-

-

-

-

Attribute code_type / @supersedes

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

code_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="supersedes" type="xs:boolean"/>

-

-

-

-

Attribute version_type / annotator / @private

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	true

-

-

-

Used by

-

-

-

- - - - - -

Element

version_type/annotator

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="private" type="xs:token" fixed="true" use="required"/>

-

-

-

-

Attribute version_list_type / status / @status_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Element

version_list_type/status

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="status_id" type="xs:positiveInteger" use="required"/>

-

-

-

-

Attribute revision_history_type / @version

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

revision_history_version_type

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[0-9]+\.[0-9]+

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

revision_history_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="version" type="revision_history_version_type" use="required"/>

-

-

-

-

Attribute revision_history_type / @date

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:date

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

revision_history_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="date" type="xs:date" use="required"/>

-

-

-

-

Attribute contact_details_type / organization / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	ACADEMIC	- -
enumeration	COMMERCIAL	- -
enumeration	GOVERMENT	- -
enumeration	OTHER	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

contact_details_type/organization

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="ACADEMIC"/>
-      <xs:enumeration value="COMMERCIAL"/>
-      <xs:enumeration value="GOVERMENT"/>
-      <xs:enumeration value="OTHER"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute admin_type / contact_author / @private

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	true

-

-

-

Used by

-

-

-

- - - - - -

Element

admin_type/contact_author

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="private" fixed="true" use="required"/>

-

-

-

-

Attribute author_ORCID_type / @ORCID

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

ORCID_type

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

pattern

[0-9]{4}-[0-9]{4}-[0-9]{4}-([0-9]{3}X|[0-9]{4})

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

author_ORCID_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="ORCID" type="ORCID_type"/>

-

-

-

-

Attribute admin_type / @composite_map

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

admin_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="composite_map" type="xs:boolean"/>

-

-

-

-

Attribute sci_name_type / @synonym

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

sci_name_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="synonym" type="xs:token"/>

-

-

-

-

Attribute base_supramolecule_type / category / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	GO	- -
enumeration	ARBITRARY DEFINITION	- -
enumeration	PROTEIN ONTOLOGY	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_supramolecule_type/category

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="GO"/>
-      <xs:enumeration value="ARBITRARY DEFINITION"/>
-      <xs:enumeration value="PROTEIN ONTOLOGY"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute base_supramolecule_type / external_references / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

enumeration	UNIPROTKB	- -
enumeration	UNIPARC	- -
enumeration	INTERPRO	- -
enumeration	GO	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_supramolecule_type/external_references

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="UNIPROTKB"/>
-      <xs:enumeration value="UNIPARC"/>
-      <xs:enumeration value="INTERPRO"/>
-      <xs:enumeration value="GO"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute base_supramolecule_type / @supramolecule_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

base_supramolecule_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="supramolecule_id" type="xs:positiveInteger" use="required"/>

-

-

-

-

Attribute organism_type / @ncbi

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

organism_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="ncbi" type="xs:positiveInteger"/>

-

-

-

-

Attribute base_source_type / @database

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - -

enumeration

NCBI

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

base_source_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="database">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="NCBI"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute base_source_type / @synthetically_produced

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

base_source_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="synthetically_produced" type="xs:boolean"/>

-

-

-

-

Attribute molecular_weight_type / experimental / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	MDa	- -
enumeration	kDa/nm	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

molecular_weight_type/experimental

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="MDa"/>
-      <xs:enumeration value="kDa/nm"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute molecular_weight_type / theoretical / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	MDa	- -
enumeration	kDa/nm	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

molecular_weight_type/theoretical

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="MDa"/>
-      <xs:enumeration value="kDa/nm"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute base_macromolecule_type / @macromolecule_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

base_macromolecule_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="macromolecule_id" type="xs:positiveInteger" use="required"/>

-

-

-

-

Attribute base_macromolecule_type / @mutant

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

base_macromolecule_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="mutant" type="xs:boolean"/>

-

-

-

-

Attribute base_macromolecule_type / @chimera

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

base_macromolecule_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="chimera" type="xs:boolean"/>

-

-

-

-

Attribute base_preparation_type / concentration / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:string

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	mg/mL	- -
enumeration	mM	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_preparation_type/concentration

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:string">
-      <xs:enumeration value="mg/mL"/>
-      <xs:enumeration value="mM"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute buffer_component_type / concentration / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Element

buffer_component_type/concentration

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" use="required"/>

-

-

-

-

Attribute base_preparation_type / shadowing / angle / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	deg

-

-

-

Used by

-

-

-

- - - - - -

Element

base_preparation_type/shadowing/angle

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>

-

-

-

-

Attribute base_preparation_type / shadowing / thickness / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	nm

-

-

-

Used by

-

-

-

- - - - - -

Element

base_preparation_type/shadowing/thickness

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="nm" use="required"/>

-

-

-

-

Attribute film_type / film_thickness / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

fixed

nm

-

-

-

Used by

-

-

-

- - - - - -

Element

film_type/film_thickness

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="nm"/>

-

-

-

-

Attribute film_type / @film_type_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

film_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="film_type_id" type="xs:positiveInteger" use="required"/>

-

-

-

-

Attribute grid_pretreatment_type / time / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	s

-

-

-

Used by

-

-

-

- - - - - -

Element

grid_pretreatment_type/time

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="s" use="required"/>

-

-

-

-

Attribute grid_pretreatment_type / pressure / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	kPa

-

-

-

Used by

-

-

-

- - - - - -

Element

grid_pretreatment_type/pressure

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="kPa" use="required"/>

-

-

-

-

Attribute vitrification_type / chamber_humidity / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	percentage

-

-

-

Used by

-

-

-

- - - - - -

Element

vitrification_type/chamber_humidity

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="percentage" use="required"/>

-

-

-

-

Attribute vitrification_type / chamber_temperature / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	K

-

-

-

Used by

-

-

-

- - - - - -

Element

vitrification_type/chamber_temperature

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="K" use="required"/>

-

-

-

-

Attribute base_preparation_type / @preparation_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

base_preparation_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="preparation_id" type="xs:positiveInteger" use="required"/>

-

-

-

-

Attribute base_microscopy_type / acceleration_voltage / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	kV

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/acceleration_voltage

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="kV" use="required"/>

-

-

-

-

Attribute base_microscopy_type / c2_aperture_diameter / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	µm

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/c2_aperture_diameter

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>

-

-

-

-

Attribute base_microscopy_type / nominal_cs / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	mm

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/nominal_cs

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="mm" use="required"/>

-

-

-

-

Attribute base_microscopy_type / nominal_defocus_min / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	µm

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/nominal_defocus_min

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>

-

-

-

-

Attribute base_microscopy_type / calibrated_defocus_min / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	µm

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/calibrated_defocus_min

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>

-

-

-

-

Attribute base_microscopy_type / nominal_defocus_max / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	µm

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/nominal_defocus_max

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>

-

-

-

-

Attribute base_microscopy_type / calibrated_defocus_max / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	µm

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/calibrated_defocus_max

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>

-

-

-

-

Attribute temperature_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	K

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

temperature_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="K" use="required"/>

-

-

-

-

Attribute residual_tilt_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	mrad

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

residual_tilt_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="mrad" use="required"/>

-

-

-

-

Attribute specialist_optics_type / energy_filter / slit_width / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	eV

-

-

-

Used by

-

-

-

- - - - - -

Element

specialist_optics_type/energy_filter/slit_width

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>

-

-

-

-

Attribute specialist_optics_type / energy_filter / lower_energy_threshold / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	eV

-

-

-

Used by

-

-

-

- - - - - -

Element

specialist_optics_type/energy_filter/lower_energy_threshold

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>

-

-

-

-

Attribute specialist_optics_type / energy_filter / upper_energy_threshold / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	eV

-

-

-

Used by

-

-

-

- - - - - -

Element

specialist_optics_type/energy_filter/upper_energy_threshold

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="eV" use="required"/>

-

-

-

-

Attribute base_microscopy_type / image_recording_list / image_recording / film_or_detector_model / @category

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:string

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	CCD	- -
enumeration	CMOS	- -
enumeration	DIRECT ELECTRON DETECTOR	- -
enumeration	STORAGE PHOSPOR (IMAGE PLATES)	- -
enumeration	FILM	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording/film_or_detector_model

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="category">
-  <xs:simpleType>
-    <xs:restriction base="xs:string">
-      <xs:enumeration value="CCD"/>
-      <xs:enumeration value="CMOS"/>
-      <xs:enumeration value="DIRECT ELECTRON DETECTOR"/>
-      <xs:enumeration value="STORAGE PHOSPOR (IMAGE PLATES)"/>
-      <xs:enumeration value="FILM"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute base_microscopy_type / image_recording_list / image_recording / digitization_details / dimensions / width / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	pixel

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording/digitization_details/dimensions/width

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>

-

-

-

-

Attribute base_microscopy_type / image_recording_list / image_recording / digitization_details / dimensions / height / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	pixel

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording/digitization_details/dimensions/height

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="pixel" use="required"/>

-

-

-

-

Attribute base_microscopy_type / image_recording_list / image_recording / digitization_details / sampling_interval / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	µm

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording/digitization_details/sampling_interval

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="µm" use="required"/>

-

-

-

-

Attribute base_microscopy_type / image_recording_list / image_recording / average_exposure_time / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	s

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording/average_exposure_time

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="s" use="required"/>

-

-

-

-

Attribute base_microscopy_type / image_recording_list / image_recording / average_electron_dose_per_image / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	e/Å^2

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording/average_electron_dose_per_image

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="e/Å^2" use="required"/>

-

-

-

-

Attribute base_microscopy_type / image_recording_list / image_recording / @image_recording_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Element

base_microscopy_type/image_recording_list/image_recording

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="image_recording_id" type="xs:positiveInteger"/>

-

-

-

-

Attribute base_microscopy_type / @microscopy_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

base_microscopy_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="microscopy_id" type="xs:positiveInteger" use="required"/>

-

-

-

-

Attribute base_image_processing_type / @image_processing_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

base_image_processing_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="image_processing_id" type="xs:positiveInteger" use="required"/>

-

-

-

-

Attribute structure_determination_type / @structure_determination_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

structure_determination_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="structure_determination_id" type="xs:positiveInteger" use="required"/>

-

-

-

-

Attribute helical_parameters_type / delta_z / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

helical_parameters_type/delta_z

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute helical_parameters_type / delta_phi / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	deg

-

-

-

Used by

-

-

-

- - - - - -

Element

helical_parameters_type/delta_phi

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>

-

-

-

-

Attribute cell_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

cell_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute cell_angle_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	deg

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

cell_angle_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>

-

-

-

-

Attribute pixel_spacing_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

pixel_spacing_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute map_type / contour_list / contour / @primary

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Element

map_type/contour_list/contour

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="primary" type="xs:boolean" use="required"/>

-

-

-

-

Attribute map_type / @format

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	CCP4

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

map_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="format" fixed="CCP4" use="required"/>

-

-

-

-

Attribute map_type / @size_kbytes

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

map_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="size_kbytes" type="xs:positiveInteger" use="required"/>

-

-

-

-

Attribute entry_type / @emdb_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

emdb_id_type

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - -

pattern

EMD-\d{4,}

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

entry_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="emdb_id" type="emdb_id_type" use="required"/>

-

-

-

-

Attribute entry_type / @version

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

default

3.0.10.0

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

entry_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="version" type="xs:token" default="3.0.10.0"/>

-

-

-

-

Attribute part_revision_change_type / @part

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

part_revision_change_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="part" type="xs:positiveInteger"/>

-

-

-

-

Attribute revision_category_or_item_type / @revision_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

revision_category_or_item_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="revision_type" type="xs:token" use="required"/>

-

-

-

-

Attribute revision_category_or_item_type / @part

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

revision_category_or_item_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="part" type="xs:positiveInteger"/>

-

-

-

-

Attribute revision_category_or_item_type / @revision_action

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

revision_category_or_item_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="revision_action" type="xs:token" use="required"/>

-

-

-

-

Attribute author_order_type / @order

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

author_order_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="order" type="xs:positiveInteger"/>

-

-

-

-

Attribute journal_citation / external_references / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

whiteSpace	collapse	- -
enumeration	PUBMED	- -
enumeration	DOI	- -
enumeration	ISBN	- -
enumeration	ISSN	- -
enumeration	CAS	- -
enumeration	CSD	- -
enumeration	MEDLINE	- -
enumeration	ASTM	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

journal_citation/external_references

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PUBMED"/>
-      <xs:enumeration value="DOI"/>
-      <xs:enumeration value="ISBN"/>
-      <xs:enumeration value="ISSN"/>
-      <xs:enumeration value="CAS"/>
-      <xs:whiteSpace value="collapse"/>
-      <xs:enumeration value="CSD"/>
-      <xs:enumeration value="MEDLINE"/>
-      <xs:enumeration value="ASTM"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute journal_citation / @published

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Element

journal_citation

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="published" type="xs:boolean" use="required"/>

-

-

-

-

Attribute non_journal_citation / external_references / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

whiteSpace	collapse	- -
enumeration	PUBMED	- -
enumeration	DOI	- -
enumeration	ISBN	- -
enumeration	ISSN	- -
enumeration	CAS	- -
enumeration	CSD	- -
enumeration	MEDLINE	- -
enumeration	ASTM	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

non_journal_citation/external_references

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PUBMED"/>
-      <xs:enumeration value="DOI"/>
-      <xs:enumeration value="ISBN"/>
-      <xs:enumeration value="ISSN"/>
-      <xs:enumeration value="CAS"/>
-      <xs:whiteSpace value="collapse"/>
-      <xs:enumeration value="CSD"/>
-      <xs:enumeration value="MEDLINE"/>
-      <xs:enumeration value="ASTM"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute non_journal_citation / @published

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Element

non_journal_citation

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="published" type="xs:boolean" use="required"/>

-

-

-

-

Attribute recombinant_source_type / @database

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - -

enumeration

NCBI

-

-

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

recombinant_source_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="database" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="NCBI"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute complex_supramolecule_type / @chimera

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:boolean

-

Properties

-

-

-

- - - - - -

fixed

true

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

complex_supramolecule_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="chimera" type="xs:boolean" fixed="true"/>

-

-

-

-

Attribute virus_species_name_type / @ncbi

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

virus_species_name_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="ncbi" type="xs:positiveInteger"/>

-

-

-

-

Attribute virus_supramolecule_type / virus_shell / diameter / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

virus_supramolecule_type/virus_shell/diameter

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" fixed="Å" use="required"/>

-

-

-

-

Attribute virus_supramolecule_type / virus_shell / @shell_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Element

virus_supramolecule_type/virus_shell

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="shell_id" type="xs:positiveInteger"/>

-

-

-

-

Attribute dna_macromolecule_type / sequence / external_references / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

whiteSpace	collapse	- -
enumeration	REFSEQ	- -
enumeration	GENBANK	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

dna_macromolecule_type/sequence/external_references

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="REFSEQ"/>
-      <xs:enumeration value="GENBANK"/>
-      <xs:whiteSpace value="collapse"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute ligand_macromolecule_type / external_references / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

whiteSpace	collapse	- -
enumeration	CAS	- -
enumeration	PUBCHEM	- -
enumeration	DRUGBANK	- -
enumeration	CHEBI	- -
enumeration	CHEMBL	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

ligand_macromolecule_type/external_references

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:whiteSpace value="collapse"/>
-      <xs:enumeration value="CAS"/>
-      <xs:enumeration value="PUBCHEM"/>
-      <xs:enumeration value="DRUGBANK"/>
-      <xs:enumeration value="CHEBI"/>
-      <xs:enumeration value="CHEMBL"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute other_macromolecule_type / sequence / external_references / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Used by

-

-

-

- - - - - -

Element

other_macromolecule_type/sequence/external_references

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type" type="xs:token" use="required"/>

-

-

-

-

Attribute protein_or_peptide_macromolecule_type / sequence / external_references / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - - - - - - -

enumeration	UNIPROTKB	- -
enumeration	UNIPARC	- -
enumeration	INTERPRO	- -
enumeration	GO	- -
enumeration	GENBANK	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

protein_or_peptide_macromolecule_type/sequence/external_references

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="UNIPROTKB"/>
-      <xs:enumeration value="UNIPARC"/>
-      <xs:enumeration value="INTERPRO"/>
-      <xs:enumeration value="GO"/>
-      <xs:enumeration value="GENBANK"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute rna_macromolecule_type / sequence / external_references / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - - - - - - -

whiteSpace	collapse	- -
enumeration	REFSEQ	- -
enumeration	GENBANK	- -
enumeration	UNIPROTKB	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

rna_macromolecule_type/sequence/external_references

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="REFSEQ"/>
-      <xs:enumeration value="GENBANK"/>
-      <xs:enumeration value="UNIPROTKB"/>
-      <xs:whiteSpace value="collapse"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute saccharide_macromolecule_type / external_references / @type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

whiteSpace	collapse	- -
enumeration	CARDBANK	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

saccharide_macromolecule_type/external_references

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="CARDBANK"/>
-      <xs:whiteSpace value="collapse"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute crystal_formation_temperature_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	K

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

crystal_formation_temperature_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="K" use="required"/>

-

-

-

-

Attribute crystal_formation_time_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - - - - - - -

enumeration	MINUTE	- -
enumeration	HOUR	- -
enumeration	DAY	- -

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

crystal_formation_time_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="MINUTE"/>
-      <xs:enumeration value="HOUR"/>
-      <xs:enumeration value="DAY"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute fiducial_marker_diameter_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	nanometer

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fiducial_marker_diameter_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="nanometer" use="required"/>

-

-

-

-

Attribute ultramicrotomy_final_thickness_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

default

nm

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

ultramicrotomy_final_thickness_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute default="nm" name="units" type="xs:token"/>

-

-

-

-

Attribute fib_voltage_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - -

fixed

kV

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_voltage_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" fixed="kV"/>

-

-

-

-

Attribute fib_current_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - -

fixed

nA

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_current_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" fixed="nA"/>

-

-

-

-

Attribute fib_dose_rate_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

default

ions/(cm^2*s)

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_dose_rate_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" default="ions/(cm^2*s)"/>

-

-

-

-

Attribute fib_duration_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

fixed

s

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_duration_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="s"/>

-

-

-

-

Attribute fib_initial_thickness_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

default

nm

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_initial_thickness_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" default="nm"/>

-

-

-

-

Attribute fib_final_thickness_type / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

default

nm

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

fib_final_thickness_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" default="nm"/>

-

-

-

-

Attribute crystallography_microscopy_type / camera_length / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	mm

-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_microscopy_type/camera_length

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="mm" use="required"/>

-

-

-

-

Attribute axis_type / min_angle / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	deg

-

-

-

Used by

-

-

-

- - - - - -

Element

axis_type/min_angle

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" fixed="deg" use="required"/>

-

-

-

-

Attribute axis_type / max_angle / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	deg

-

-

-

Used by

-

-

-

- - - - - -

Element

axis_type/max_angle

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" fixed="deg" use="required"/>

-

-

-

-

Attribute axis_type / angle_increment / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	deg

-

-

-

Used by

-

-

-

- - - - - -

Element

axis_type/angle_increment

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" fixed="deg" use="required"/>

-

-

-

-

Attribute tilt_series_type / axis_rotation / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	deg

-

-

-

Used by

-

-

-

- - - - - -

Element

tilt_series_type/axis_rotation

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="deg" use="required"/>

-

-

-

-

Attribute final_reconstruction_type / resolution / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

final_reconstruction_type/resolution

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute final_reconstruction_type / resolution / @res_type

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - -

enumeration

BY AUTHOR

-

-

-

-

-

Used by

-

-

-

- - - - - -

Element

final_reconstruction_type/resolution

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="res_type" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="BY AUTHOR"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute background_masked_type / dimensions / radius / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	PIXEL	- -
enumeration	Å	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

background_masked_type/dimensions/radius

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PIXEL"/>
-      <xs:enumeration value="Å"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute background_masked_type / dimensions / width / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	PIXEL	- -
enumeration	Å	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

background_masked_type/dimensions/width

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PIXEL"/>
-      <xs:enumeration value="Å"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute background_masked_type / dimensions / height / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	PIXEL	- -
enumeration	Å	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

background_masked_type/dimensions/height

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PIXEL"/>
-      <xs:enumeration value="Å"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute background_masked_type / dimensions / depth / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

restriction of xs:token

-

Properties

-

-

-

- - - - - -

use	required

-

-

-

Facets

-

-

-

- - - - - - - - - - - -

enumeration	PIXEL	- -
enumeration	Å	- -

-

-

-

Used by

-

-

-

- - - - - -

Element

background_masked_type/dimensions/depth

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" use="required">
-  <xs:simpleType>
-    <xs:restriction base="xs:token">
-      <xs:enumeration value="PIXEL"/>
-      <xs:enumeration value="Å"/>
-    </xs:restriction>
-  </xs:simpleType>
-</xs:attribute>

-

-

-

-

Attribute reconstruction_filtering_type / spatial_filtering / low_frequency_cutoff / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	1/Å

-

-

-

Used by

-

-

-

- - - - - -

Element

reconstruction_filtering_type/spatial_filtering/low_frequency_cutoff

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" fixed="1/Å" use="required"/>

-

-

-

-

Attribute reconstruction_filtering_type / spatial_filtering / high_frequency_cutoff / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	1/Å

-

-

-

Used by

-

-

-

- - - - - -

Element

reconstruction_filtering_type/spatial_filtering/high_frequency_cutoff

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" fixed="1/Å" use="required"/>

-

-

-

-

Attribute reconstruction_filtering_type / b-factorSharpening / _brestore / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å^2

-

-

-

Used by

-

-

-

- - - - - -

Element

reconstruction_filtering_type/b-factorSharpening/_brestore

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å^2" use="required"/>

-

-

-

-

Attribute starting_map_type / random_conical_tilt / tilt_angle / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	degrees

-

-

-

Used by

-

-

-

- - - - - -

Element

starting_map_type/random_conical_tilt/tilt_angle

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>

-

-

-

-

Attribute starting_map_type / orthogonal_tilt / tilt_angle1 / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	degrees

-

-

-

Used by

-

-

-

- - - - - -

Element

starting_map_type/orthogonal_tilt/tilt_angle1

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>

-

-

-

-

Attribute starting_map_type / orthogonal_tilt / tilt_angle2 / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	degrees

-

-

-

Used by

-

-

-

- - - - - -

Element

starting_map_type/orthogonal_tilt/tilt_angle2

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>

-

-

-

-

Attribute starting_map_type / @type_of_model

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Complex Type

starting_map_type

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="type_of_model" type="xs:token"/>

-

-

-

-

Attribute molecular_replacement_type / resolution_range / high_resolution / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

molecular_replacement_type/resolution_range/high_resolution

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute molecular_replacement_type / resolution_range / low_resolution / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

molecular_replacement_type/resolution_range/low_resolution

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute crystallography_statistics_type / high_resolution / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_statistics_type/high_resolution

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute crystallography_statistics_type / shell_list / shell / high_resolution / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_statistics_type/shell_list/shell/high_resolution

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute crystallography_statistics_type / shell_list / shell / low_resolution / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_statistics_type/shell_list/shell/low_resolution

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute crystallography_statistics_type / shell_list / shell / @shell_id

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:positiveInteger

-

Properties

-

-

-

- - - - - -

content

simple

-

-

-

Used by

-

-

-

- - - - - -

Element

crystallography_statistics_type/shell_list/shell

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="shell_id" type="xs:positiveInteger"/>

-

-

-

-

Attribute segment_selection_type / segment_length / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

segment_selection_type/segment_length

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute segment_selection_type / segment_overlap / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

segment_selection_type/segment_overlap

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute segment_selection_type / total_filament_length / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	Å

-

-

-

Used by

-

-

-

- - - - - -

Element

segment_selection_type/total_filament_length

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="Å" use="required"/>

-

-

-

-

Attribute angle_assignment_type / projection_matching_processing / angular_sampling / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	degrees

-

-

-

Used by

-

-

-

- - - - - -

Element

angle_assignment_type/projection_matching_processing/angular_sampling

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>

-

-

-

-

Attribute single_particle_proc_add_group / final_multi_reference_alignment / angular_sampling / @units

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

Type

xs:token

-

Properties

-

-

-

- - - - - - - - - -

use	required
fixed	degrees

-

-

-

Used by

-

-

-

- - - - - -

Element

single_particle_proc_add_group/final_multi_reference_alignment/angular_sampling

-

-

-

Source

-

-

-

- - - - -

-

<xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>

-

-

-

-

Element Group crystallography_proc_add_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Complex Type

crystallography_processing_type

-

-

Model

-

-

final_reconstruction{0,1} , crystal_parameters{0,1} , startup_model* , ctf_correction{0,1} , molecular_replacement{0,1} , lattice_distortion_correction_software_list{0,1} , symmetry_determination_software_list{0,1} , merging_software_list{0,1} , crystallography_statistics{0,1}

-

Children

crystal_parameters, crystallography_statistics, ctf_correction, final_reconstruction, lattice_distortion_correction_software_list, merging_software_list, molecular_replacement, startup_model, symmetry_determination_software_list

-

Source

-

-

-

- - - - -

-

<xs:group name="crystallography_proc_add_group">
-  <xs:sequence>
-    <xs:element name="final_reconstruction" type="non_subtom_final_reconstruction_type" minOccurs="0"/>
-    <xs:element name="crystal_parameters" type="crystal_parameters_type" minOccurs="0"/>
-    <xs:element name="startup_model" type="starting_map_type" minOccurs="0" maxOccurs="unbounded"/>
-    <xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>
-    <xs:element name="molecular_replacement" type="molecular_replacement_type" minOccurs="0"/>
-    <xs:element name="lattice_distortion_correction_software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="symmetry_determination_software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="merging_software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="crystallography_statistics" type="crystallography_statistics_type" minOccurs="0"/>
-  </xs:sequence>
-</xs:group>

-

-

-

-

Element Group helical_processing_add_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Complex Type

helical_processing_type

-

-

Model

-

-

final_reconstruction{0,1} , ctf_correction{0,1} , segment_selection* , refinement{0,1} , startup_model* , helical_layer_lines{0,1} , initial_angle_assignment{0,1} , final_angle_assignment{0,1} , crystal_parameters{0,1}

-

Children

crystal_parameters, ctf_correction, final_angle_assignment, final_reconstruction, helical_layer_lines, initial_angle_assignment, refinement, segment_selection, startup_model

-

Source

-

-

-

- - - - -

-

<xs:group name="helical_processing_add_group">
-  <xs:sequence>
-    <xs:element name="final_reconstruction" type="non_subtom_final_reconstruction_type" minOccurs="0"/>
-    <xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>
-    <xs:element name="segment_selection" type="segment_selection_type" minOccurs="0" maxOccurs="unbounded"/>
-    <xs:element name="refinement" type="refinement_type" minOccurs="0"/>
-    <xs:element name="startup_model" type="starting_map_type" minOccurs="0" maxOccurs="unbounded"/>
-    <xs:element name="helical_layer_lines" type="layer_lines_type" minOccurs="0"/>
-    <xs:element name="initial_angle_assignment" type="angle_assignment_type" minOccurs="0"/>
-    <xs:element name="final_angle_assignment" type="angle_assignment_type" minOccurs="0"/>
-    <xs:element name="crystal_parameters" type="crystal_parameters_type" minOccurs="0"/>
-  </xs:sequence>
-</xs:group>

-

-

-

-

Element Group single_particle_proc_add_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Complex Type

singleparticle_processing_type

-

-

Model

-

-

particle_selection* , ctf_correction{0,1} , startup_model* , final_reconstruction{0,1} , initial_angle_assignment{0,1} , final_angle_assignment{0,1} , final_multi_reference_alignment{0,1} , final_two_d_classification{0,1} , final_three_d_classification{0,1}

-

Children

ctf_correction, final_angle_assignment, final_multi_reference_alignment, final_reconstruction, final_three_d_classification, final_two_d_classification, initial_angle_assignment, particle_selection, startup_model

-

Source

-

-

-

- - - - -

-

<xs:group name="single_particle_proc_add_group">
-  <xs:sequence>
-    <xs:element name="particle_selection" type="particle_selection_type" minOccurs="0" maxOccurs="unbounded"/>
-    <xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>
-    <xs:element name="startup_model" type="starting_map_type" minOccurs="0" maxOccurs="unbounded"/>
-    <xs:element name="final_reconstruction" type="non_subtom_final_reconstruction_type" minOccurs="0"/>
-    <xs:element name="initial_angle_assignment" type="angle_assignment_type" minOccurs="0"/>
-    <xs:element name="final_angle_assignment" type="angle_assignment_type" minOccurs="0"/>
-    <xs:element name="final_multi_reference_alignment" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="number_reference_projections" type="xs:positiveInteger"/>
-          <xs:element name="merit_function" minOccurs="0" type="xs:string"/>
-          <xs:element name="angular_sampling" minOccurs="0">
-            <xs:complexType>
-              <xs:simpleContent>
-                <xs:extension base="allowed_angular_sampling">
-                  <xs:attribute name="units" type="xs:token" fixed="degrees" use="required"/>
-                </xs:extension>
-              </xs:simpleContent>
-            </xs:complexType>
-          </xs:element>
-          <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="final_two_d_classification" type="classification_type" minOccurs="0"/>
-    <xs:element name="final_three_d_classification" type="classification_type" minOccurs="0"/>
-  </xs:sequence>
-</xs:group>

-

-

-

-

Element Group subtomogram_averaging_proc_add_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Complex Type

subtomogram_averaging_processing_type

-

-

Model

-

-

final_reconstruction{0,1} , extraction , ctf_correction{0,1} , final_multi_reference_alignment{0,1} , final_three_d_classification{0,1} , final_angle_assignment{0,1} , crystal_parameters{0,1}

-

Children

crystal_parameters, ctf_correction, extraction, final_angle_assignment, final_multi_reference_alignment, final_reconstruction, final_three_d_classification

-

Source

-

-

-

- - - - -

-

<xs:group name="subtomogram_averaging_proc_add_group">
-  <xs:sequence>
-    <xs:element name="final_reconstruction" type="subtomogram_final_reconstruction_type" minOccurs="0"/>
-    <xs:element name="extraction">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="number_tomograms" type="xs:positiveInteger"/>
-          <xs:element name="number_images_used" type="xs:positiveInteger"/>
-          <xs:element name="reference_model" type="xs:token" minOccurs="0"/>
-          <xs:element name="method" type="xs:string" minOccurs="0"/>
-          <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>
-    <xs:element name="final_multi_reference_alignment" minOccurs="0">
-      <xs:complexType>
-        <xs:sequence>
-          <xs:element name="number_reference_projections" type="xs:positiveInteger"/>
-          <xs:element name="merit_function" minOccurs="0" type="xs:string"/>
-          <xs:element name="software_list" type="software_list_type" minOccurs="0"/>
-          <xs:element name="details" type="xs:string" minOccurs="0"/>
-        </xs:sequence>
-      </xs:complexType>
-    </xs:element>
-    <xs:element name="final_three_d_classification" type="classification_type" minOccurs="0"/>
-    <xs:element name="final_angle_assignment" type="angle_assignment_type" minOccurs="0"/>
-    <xs:element name="crystal_parameters" type="crystal_parameters_type" minOccurs="0"/>
-  </xs:sequence>
-</xs:group>

-

-

-

-

Element Group tomography_proc_add_group

- - - - - - - - - - - - - - - - -

- - - - - - - - - - - - - - - - - - - - - - - - - - - -

Namespace

No namespace

-

Diagram

-

-

-

Diagram

-

-

Used by

-

-

-

- - - - - -

Complex Type

tomography_processing_type

-

-

Model

-

-

final_reconstruction{0,1} , series_aligment_software_list{0,1} , ctf_correction{0,1} , crystal_parameters{0,1}

-

Children

crystal_parameters, ctf_correction, final_reconstruction, series_aligment_software_list

-

Source

-

-

-

- - - - -

-

<xs:group name="tomography_proc_add_group">
-  <xs:sequence>
-    <xs:element name="final_reconstruction" type="non_subtom_final_reconstruction_type" minOccurs="0"/>
-    <xs:element name="series_aligment_software_list" type="software_list_type" minOccurs="0"/>
-    <xs:element name="ctf_correction" type="ctf_correction_type" minOccurs="0"/>
-    <xs:element name="crystal_parameters" type="crystal_parameters_type" minOccurs="0"/>
-  </xs:sequence>
-</xs:group>

-

-

-

-

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file mode 100644 index c0b44c6..0000000 Binary files a/emdb_schemas/current/doc/img/lB.gif and /dev/null differ diff --git a/emdb_schemas/current/doc/img/lL.gif b/emdb_schemas/current/doc/img/lL.gif deleted file mode 100644 index bfbef22..0000000 Binary files a/emdb_schemas/current/doc/img/lL.gif and /dev/null differ diff --git a/emdb_schemas/current/doc/img/lR.gif b/emdb_schemas/current/doc/img/lR.gif deleted file mode 100644 index cd75fdc..0000000 Binary files a/emdb_schemas/current/doc/img/lR.gif and /dev/null differ diff --git a/emdb_schemas/current/doc/img/lT.gif b/emdb_schemas/current/doc/img/lT.gif deleted file mode 100644 index c67c576..0000000 Binary files a/emdb_schemas/current/doc/img/lT.gif and /dev/null differ diff --git a/emdb_schemas/current/emdb.py b/emdb_schemas/current/emdb.py index c89b4b0..24c5fd9 100644 --- a/emdb_schemas/current/emdb.py +++ b/emdb_schemas/current/emdb.py @@ -2,7 +2,7 @@ # -*- coding: utf-8 -*- # -# Generated Fri Jan 31 16:20:03 2025 by generateDS.py version 2.43.3. +# Generated Fri Jan 31 18:22:43 2025 by generateDS.py version 2.43.3. # Python 3.9.19 (main, Mar 21 2024, 12:08:14) [Clang 14.0.6 ] # # Command line options: diff --git a/emdb_schemas/current/emdb.xsd b/emdb_schemas/current/emdb.xsd index 0b232ed..20a46b6 100644 --- a/emdb_schemas/current/emdb.xsd +++ b/emdb_schemas/current/emdb.xsd @@ -261,7 +261,7 @@ - + diff --git a/emdb_schemas/current/emdb_relaxed.py b/emdb_schemas/current/emdb_relaxed.py index 76ba71a..9a58fa0 100644 --- a/emdb_schemas/current/emdb_relaxed.py +++ b/emdb_schemas/current/emdb_relaxed.py @@ -2,7 +2,7 @@ # -*- coding: utf-8 -*- # -# Generated Fri Jan 31 16:22:49 2025 by generateDS.py version 2.43.3. +# Generated Fri Jan 31 18:24:00 2025 by generateDS.py version 2.43.3. # Python 3.9.19 (main, Mar 21 2024, 12:08:14) [Clang 14.0.6 ] # # Command line options: diff --git a/emdb_schemas/current/emdb_relaxed.xsd b/emdb_schemas/current/emdb_relaxed.xsd index d4ba3bb..f2bab19 100644 --- a/emdb_schemas/current/emdb_relaxed.xsd +++ b/emdb_schemas/current/emdb_relaxed.xsd @@ -255,7 +255,7 @@ - + diff --git a/emdb_schemas/v3/current_v3/doc/emdb_xsd.html b/emdb_schemas/v3/current_v3/doc/emdb_xsd.html index 4744676..9dcd52d 100644 --- a/emdb_schemas/v3/current_v3/doc/emdb_xsd.html +++ b/emdb_schemas/v3/current_v3/doc/emdb_xsd.html @@ -6396,7 +6396,7 @@

Showing:

Model

-

revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}

+

revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1}

@@ -6414,7 +6414,7 @@

Showing:

<revision_change_sub_group>
-  <revision_type>{1,1}</revision_type>
+  <revision_type>{0,1}</revision_type>
   <provider>{1,1}</provider>
   <description>{0,1}</description>
   <details>{0,1}</details>
@@ -6494,6 +6494,10 @@ Showing:
                                     content
                                     simple
                                  
+                                 
+                                    minOccurs
+                                    0
+                                 
                               
                            
                         
@@ -6569,7 +6573,7 @@ Showing:
                               
@@ -42486,7 +42490,7 @@ Showing:
@@ -42639,7 +42643,7 @@ Showing:
@@ -42792,7 +42796,7 @@ Showing:
@@ -42945,7 +42949,7 @@ Showing:
@@ -43098,7 +43102,7 @@ Showing:
@@ -43251,7 +43255,7 @@ Showing:
@@ -43842,7 +43846,7 @@ Showing:
@@ -88941,7 +88945,7 @@ Showing:
@@ -99453,7 +99457,7 @@ Showing:
diff --git a/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Complex_Type_base_revision_change_type.jpeg b/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Complex_Type_base_revision_change_type.jpeg
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diff --git a/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Element_image.jpeg b/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Element_image.jpeg
index b8e11a9..17b5198 100644
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diff --git a/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Element_model_1.jpeg b/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Element_model_1.jpeg
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diff --git a/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Element_revision_change_sub_group.jpeg b/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Element_revision_change_sub_group.jpeg
index 2db8a66..1fdc21f 100644
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diff --git a/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Element_revision_type.jpeg b/emdb_schemas/v3/current_v3/doc/img/emdb_xsd_Element_revision_type.jpeg
index 85f3ca7..f84f2db 100644
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diff --git a/emdb_schemas/v3/current_v3/emdb.py b/emdb_schemas/v3/current_v3/emdb.py
index c89b4b0..24c5fd9 100644
--- a/emdb_schemas/v3/current_v3/emdb.py
+++ b/emdb_schemas/v3/current_v3/emdb.py
@@ -2,7 +2,7 @@
 # -*- coding: utf-8 -*-
 
 #
-# Generated Fri Jan 31 16:20:03 2025 by generateDS.py version 2.43.3.
+# Generated Fri Jan 31 18:22:43 2025 by generateDS.py version 2.43.3.
 # Python 3.9.19 (main, Mar 21 2024, 12:08:14)  [Clang 14.0.6 ]
 #
 # Command line options:
diff --git a/emdb_schemas/v3/current_v3/emdb.xsd b/emdb_schemas/v3/current_v3/emdb.xsd
index 0b232ed..20a46b6 100644
--- a/emdb_schemas/v3/current_v3/emdb.xsd
+++ b/emdb_schemas/v3/current_v3/emdb.xsd
@@ -261,7 +261,7 @@
     
     
         
-            
+            
                 
                     
                         
diff --git a/emdb_schemas/v3/current_v3/emdb_relaxed.py b/emdb_schemas/v3/current_v3/emdb_relaxed.py
index 76ba71a..9a58fa0 100644
--- a/emdb_schemas/v3/current_v3/emdb_relaxed.py
+++ b/emdb_schemas/v3/current_v3/emdb_relaxed.py
@@ -2,7 +2,7 @@
 # -*- coding: utf-8 -*-
 
 #
-# Generated Fri Jan 31 16:22:49 2025 by generateDS.py version 2.43.3.
+# Generated Fri Jan 31 18:24:00 2025 by generateDS.py version 2.43.3.
 # Python 3.9.19 (main, Mar 21 2024, 12:08:14)  [Clang 14.0.6 ]
 #
 # Command line options:
diff --git a/emdb_schemas/v3/current_v3/emdb_relaxed.xsd b/emdb_schemas/v3/current_v3/emdb_relaxed.xsd
index d4ba3bb..f2bab19 100644
--- a/emdb_schemas/v3/current_v3/emdb_relaxed.xsd
+++ b/emdb_schemas/v3/current_v3/emdb_relaxed.xsd
@@ -255,7 +255,7 @@
     
     
         
-            
+            
                 
                     
                         
diff --git a/emdb_schemas/v3/v3_0_10_0/emdb.py b/emdb_schemas/v3/v3_0_10_0/emdb.py
index c89b4b0..24c5fd9 100644
--- a/emdb_schemas/v3/v3_0_10_0/emdb.py
+++ b/emdb_schemas/v3/v3_0_10_0/emdb.py
@@ -2,7 +2,7 @@
 # -*- coding: utf-8 -*-
 
 #
-# Generated Fri Jan 31 16:20:03 2025 by generateDS.py version 2.43.3.
+# Generated Fri Jan 31 18:22:43 2025 by generateDS.py version 2.43.3.
 # Python 3.9.19 (main, Mar 21 2024, 12:08:14)  [Clang 14.0.6 ]
 #
 # Command line options:
diff --git a/emdb_schemas/v3/v3_0_10_0/emdb.xsd b/emdb_schemas/v3/v3_0_10_0/emdb.xsd
index 0b232ed..20a46b6 100644
--- a/emdb_schemas/v3/v3_0_10_0/emdb.xsd
+++ b/emdb_schemas/v3/v3_0_10_0/emdb.xsd
@@ -261,7 +261,7 @@
     
     
         
-            
+            
                 
                     
                         
diff --git a/emdb_schemas/v3/v3_0_10_0/emdb_relaxed.py b/emdb_schemas/v3/v3_0_10_0/emdb_relaxed.py
index 76ba71a..9a58fa0 100644
--- a/emdb_schemas/v3/v3_0_10_0/emdb_relaxed.py
+++ b/emdb_schemas/v3/v3_0_10_0/emdb_relaxed.py
@@ -2,7 +2,7 @@
 # -*- coding: utf-8 -*-
 
 #
-# Generated Fri Jan 31 16:22:49 2025 by generateDS.py version 2.43.3.
+# Generated Fri Jan 31 18:24:00 2025 by generateDS.py version 2.43.3.
 # Python 3.9.19 (main, Mar 21 2024, 12:08:14)  [Clang 14.0.6 ]
 #
 # Command line options:
diff --git a/emdb_schemas/v3/v3_0_10_0/emdb_relaxed.xsd b/emdb_schemas/v3/v3_0_10_0/emdb_relaxed.xsd
index d4ba3bb..f2bab19 100644
--- a/emdb_schemas/v3/v3_0_10_0/emdb_relaxed.xsd
+++ b/emdb_schemas/v3/v3_0_10_0/emdb_relaxed.xsd
@@ -255,7 +255,7 @@
     
     
         
-            
+            
                 
                     
                         

                                  
                                     
-                                       <xs:element name="revision_type">
+                                       <xs:element name="revision_type" minOccurs="0">
   <xs:simpleType>
     <xs:restriction base="xs:token">
       <xs:enumeration value="INITIAL_RELEASE"/>
@@ -42468,7 +42472,7 @@ Showing:
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1}
                         
                      
                      
                                  

                                     
                                        <image part="">
-  <revision_type>{1,1}</revision_type>
+  <revision_type>{0,1}</revision_type>
   <provider>{1,1}</provider>
   <description>{0,1}</description>
   <details>{0,1}</details>
@@ -42621,7 +42625,7 @@ Showing:
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1}
                         
                      
                      
                                  

                                     
                                        <half_map part="">
-  <revision_type>{1,1}</revision_type>
+  <revision_type>{0,1}</revision_type>
   <provider>{1,1}</provider>
   <description>{0,1}</description>
   <details>{0,1}</details>
@@ -42774,7 +42778,7 @@ Showing:
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1}
                         
                      
                      
                                  

                                     
                                        <mask part="">
-  <revision_type>{1,1}</revision_type>
+  <revision_type>{0,1}</revision_type>
   <provider>{1,1}</provider>
   <description>{0,1}</description>
   <details>{0,1}</details>
@@ -42927,7 +42931,7 @@ Showing:
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1}
                         
                      
                      
                                  

                                     
                                        <fsc part="">
-  <revision_type>{1,1}</revision_type>
+  <revision_type>{0,1}</revision_type>
   <provider>{1,1}</provider>
   <description>{0,1}</description>
   <details>{0,1}</details>
@@ -43080,7 +43084,7 @@ Showing:
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1}
                         
                      
                      
                                  

                                     
                                        <additional_map part="">
-  <revision_type>{1,1}</revision_type>
+  <revision_type>{0,1}</revision_type>
   <provider>{1,1}</provider>
   <description>{0,1}</description>
   <details>{0,1}</details>
@@ -43233,7 +43237,7 @@ Showing:
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1} , categories{0,1} , items{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1} , categories{0,1} , items{0,1}
                         
                      
                      
                                  

                                     
                                        <model>
-  <revision_type>{1,1}</revision_type>
+  <revision_type>{0,1}</revision_type>
   <provider>{1,1}</provider>
   <description>{0,1}</description>
   <details>{0,1}</details>
@@ -43824,7 +43828,7 @@ Showing:
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1} , categories{0,1} , items{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1} , categories{0,1} , items{0,1}
                         
                      
                      
                                  

                                     
                                        <metadata>
-  <revision_type>{1,1}</revision_type>
+  <revision_type>{0,1}</revision_type>
   <provider>{1,1}</provider>
   <description>{0,1}</description>
   <details>{0,1}</details>
@@ -88922,7 +88926,7 @@ Showing:
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1}
                         
                      
                      
                                     
                                        <xs:complexType name="base_revision_change_type">
   <xs:sequence>
-    <xs:element name="revision_type">
+    <xs:element name="revision_type" minOccurs="0">
       <xs:simpleType>
         <xs:restriction base="xs:token">
           <xs:enumeration value="INITIAL_RELEASE"/>
@@ -99325,7 +99329,7 @@ Showing:
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1}
                         
                      
                      
                         Model
                         
                         
-                           revision_type , provider , description{0,1} , details{0,1} , revision_group{0,1} , categories{0,1} , items{0,1}
+                           revision_type{0,1} , provider , description{0,1} , details{0,1} , revision_group{0,1} , categories{0,1} , items{0,1}