The Escellearn package contains serveral functions that perform the same functionality as the Escellearn webportal
To install and used the package locally:
1.1 -- Change directory to Escellearn
$ cd Escellearn1.2 -- Install the package
$ pip install .1.3 -- Use the package to explore the condensed neonatal lung cell atlas
$ python31.4 -- import the class
from Escellearn import h5Reader1.5 -- Use the class to read in the input file
my_reader = h5Reader('condensed_lung_atlas_ordered.h5')1.6 -- Example of using functions in h5Reader
my_reader.dataset_unified('Col1a1')documentation of the package is in a static file located in Escellearn/Escellearn/docs/_build/html/index.html