From 67c9f9a3085dd8e461d8be317e4711de6b5a53e8 Mon Sep 17 00:00:00 2001 From: davelopez <46503462+davelopez@users.noreply.github.com> Date: Sat, 28 Sep 2024 11:26:07 +0200 Subject: [PATCH 1/2] Bump galaxy-tool-util from 24.1.1 to 24.1.2 --- server/requirements.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/server/requirements.txt b/server/requirements.txt index 4e79822..042e5cb 100644 --- a/server/requirements.txt +++ b/server/requirements.txt @@ -1,5 +1,5 @@ pygls==1.3.1 lxml==5.3.0 anytree==2.12.1 -galaxy-tool-util==24.1.1 +galaxy-tool-util==24.1.2 edam-ontology==1.25.2 From 7dbb6aea6761a2f0774cd96c4d9ad594c0a18f03 Mon Sep 17 00:00:00 2001 From: davelopez <46503462+davelopez@users.noreply.github.com> Date: Sat, 28 Sep 2024 11:59:12 +0200 Subject: [PATCH 2/2] Check imports with ruff --- server/pyproject.toml | 9 ++++----- 1 file changed, 4 insertions(+), 5 deletions(-) diff --git a/server/pyproject.toml b/server/pyproject.toml index 6e60601..82b8dde 100644 --- a/server/pyproject.toml +++ b/server/pyproject.toml @@ -7,10 +7,7 @@ warn_return_any = false warn_unused_configs = true [[tool.mypy.overrides]] -module = [ - "galaxy.*", - "anytree.*", -] +module = ["galaxy.*", "anytree.*"] ignore_missing_imports = true @@ -38,6 +35,9 @@ unfixable = [] # Allow unused variables when underscore-prefixed. dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$" +# Enable the isort rules. +extend-select = ["I"] + [tool.ruff.format] # Like Black, use double quotes for strings. quote-style = "double" @@ -64,4 +64,3 @@ docstring-code-format = true # This only has an effect when the `docstring-code-format` setting is # enabled. docstring-code-line-length = "dynamic" -