AWS_linux_deeplearning

df -h # check the location of ssd mounted. Usually /dev/
cd /dev/
sudo mkdir dnn_data
cd dnn_data
sudo aws configure # https://docs.aws.amazon.com/cli/latest/userguide/cli-configure-quickstart.html 
sudo aws s3 sync s3://shang-dnn-epi-seq-rna-project/ ./
sudo chmod 777 ./*

cd
source activate tensorflow2_p37
sudo rm /usr/local/cuda
sudo ln -s /usr/local/cuda-10.2 /usr/local/cuda ## https://docs.aws.amazon.com/dlami/latest/devguide/tutorial-base.html
cat /usr/local/cuda/include/cudnn.h | grep CUDNN_MAJOR -A 2

pip3 install --upgrade tensorflow==2.x.x 
pip3 install tensorflow_addons==0.11.2
pip3 install alibi

jupyter notebook  --generate-config
jupyter notebook password
jupyter-lab --ip 0.0.0.0 --no-browser --allow-root