The tables below describe the API changes compared to the "integrated" HRM-OMERO connector that used to be shipped with the HRM itself previously.
hrm_config |
hrm_omero |
|---|---|
parse_hrm_conf() |
hrm.parse_config() |
check_hrm_conf() |
hrm.check_config() |
ome_hrm |
hrm_omero |
|---|---|
omero_login() |
omero.connect() |
check_credentials() |
omero.check_credentials() |
gen_obj_dict() |
tree.gen_obj_dict() |
gen_children() |
tree.gen_children() |
gen_base_tree() |
tree.gen_base_tree() |
gen_group_tree() |
tree.gen_group_tree() |
tree_to_json() |
formatting.tree_to_json() |
print_children_json() |
formatting.print_children_json() |
gen_parameter_summary() |
hrm.job_parameter_summary() |
omero_to_hrm() |
transfer.from_omero() |
hrm_to_omero() |
transfer.to_omero() |
download_thumb() |
transfer.fetch_thumbnail() |
bool_to_exitstatus() |
cli.bool_to_exitstatus() |
parse_arguments() |
cli.parse_arguments() |
main() |
cli.run_task() |