.gitlab-ci.yml

parameter_files:
  tags:
    - ncrc3
    - ncrc4
  script:
    # Install / update testing scripts
    - git clone https://github.com/adcroft/MRS.git build_MRS
    # Recursively clone submodules
    - git submodule sync --recursive && git submodule update --init --recursive
    # Clone other components
    - test -d src/LM3 || make -f build_MRS/Makefile.clone CONFIGS=. clone_gfdl -s
    # Create mannifest of experiments to run
    - git clone http://gitlab.gfdl.noaa.gov/ogrp/Gaea-stats-MOM6-examples.git tests && mv tests/regressions . && rm -rf tests
    - bash build_MRS/generate_manifest.sh . > manifest.mk && rm -rf regressions
    # Build executables
    - time make -f build_MRS/Makefile.build build_gnu CONFIGS=. -s -j
    # Run standard tests
    - echo "make -f build_MRS/Makefile.run gnu_all MEMORY=dynamic_symmetric CONFIGS=. -s -j" > job.sh
    - msub -l partition=c3:c4,nodes=25,walltime=00:08:00,qos=norm -q debug -S /bin/tcsh -j oe -A gfdl_o -z -o log.$CI_PIPELINE_ID -N mom6_examples_test -K job.sh
    # Check status of doc files
    - git status
    - git diff --exit-code

coverage:
  tags:
    - ncrc3
    - ncrc4
  script:
    # Install / update testing scripts
    - git clone https://github.com/adcroft/MRS.git build_MRS
    # Recursively clone submodules
    - git submodule sync --recursive && git submodule update --init --recursive
    # Clone other components
    - test -d src/LM3 || make -f build_MRS/Makefile.clone CONFIGS=. clone_gfdl -s
    # Create mannifest of experiments to run
    - git clone http://gitlab.gfdl.noaa.gov/ogrp/Gaea-stats-MOM6-examples.git tests && mv tests/regressions . && rm -rf tests
    - bash build_MRS/generate_manifest.sh . > manifest.mk && rm -rf regressions
    # Build executables
    - time make -f build_MRS/Makefile.build coverage_gnu CONFIGS=. EXTRA_MAKE_ARGS="FFLAGS_COVERAGE=--coverage LDFLAGS_COVERAGE=--coverage" -s -j
    # Run standard tests
    - echo "time make -f build_MRS/Makefile.coverage gnu_ocean_only gnu_ice_ocean_SIS2 MEMORY=dynamic_symmetric CONFIGS=." > job.sh
    - msub -l partition=c3:c4,nodes=15,walltime=00:37:00,qos=norm -q debug -S /bin/tcsh -j oe -A gfdl_o -z -o log.$CI_PIPELINE_ID -N mom6_coverage -K job.sh
    # Process lcov files
    - make -f build_MRS/Makefile.coverage CONFIGS=. coverage
    # Post to codecov
    - cd src/MOM6 ; curl -s https://codecov.io/bash > codecov.sh
    - GITLAB_CI=""
    - PWD=`pwd` bash codecov.sh -t $CODECOV_TOKEN -X gcov