-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathscheme.sql
351 lines (307 loc) · 11.8 KB
/
scheme.sql
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
-- ------------------------------------------------------------
-- Description: Acacia: A Generic Conceptual Schema for Taxonomic Databases
-- Author: M. J. Cavalcanti <maurobio@gmail.com>
-- (c) copyright 2004-2024 Mauro J. Cavalcanti
-- Revision history:
-- Version 1.00, 13-Dec-2004:
-- * Initial release
-- Version 1.01, 26-Jun-2007:
-- * Added additional taxonomic levels (Kingdom, Phylum, Class, Order) to Higher Taxa table
-- Version 1.02, 12-Jul-2008:
-- * Added Descriptors dictionary and changed Descriptions table
-- * Added more taxonomic levels (Subphylum, Subclass, Suborder, Superfamily, Subfamily, Tribe) to Higher Taxa table
-- * Changed name of the Gazetteer table to Geography
-- * Added Metadata table
-- Version 1.03, 3-Oct-2008:
-- * Added optional attributes (Locality, Latitude, Longitude) to Distribution table
-- Version 1.04, 27-Oct-2008:
-- * Added a new attribute (Title) to Bibliography table
-- * Attribute home in Metadata table renamed to url
-- * Added attributes Acronym and Logotype name to Metadata table
-- * Added attribute Type to Resources table
-- * Removed attribute Descriptor Number from Resources table
-- Version 1.05, 14-Nov-2008:
-- * Added attribute Sequence to Bibliography table
-- Version 1.06, 07-Apr-2010:
-- * Added attribute Subgenus to Synonyms and Taxa tables
-- Version 1.07, 23-Mar-2012:
-- * Changed type of Latitude and Longitude attributes in Distribution table to float
-- Version 1.08, 29-Apr-2012:
-- * Attribute Resource extended to 128 characters in Resources table
-- Version 1.09, 03-May-2012:
-- * Removed the Geography dictionary table
-- * Added attributes Continent, Region, Country, State, and County to Distribution table
-- * Attribute Type changed to 20 characters in Resources table
-- * Removed the Descriptors dictionary table
-- * Changed table Descriptions to Descriptors
-- * Added attributes Character Number, Character Type, Unit, and State Number to Descriptors table
-- Version 1.10, 08-May-2012:
-- * Added attribute Type to Bibliography table
-- * Added attributes Scope and Environment to Metadata table
-- Version 1.11, 03-Jul-2012:
-- * Attribute Title changed to 254 characters in Bibliography table
-- * Attribute Locality changed to 254 characters in Distribution table
-- Version 1.12, 07-Jul-2012:
-- * Added Conservation Status table
-- Version 1.13, 10-Jul-2012:
-- * Attribute Descriptor Type changed to 20 characters in Descriptors table
-- Version 1.14, 12-Jul-2012:
-- * Added Genome table
-- Version 1.15, 21-Aug-2012:
-- * Attribute Detail changed to 160 characters in Bibliography table
-- * Added attribute Population Trend to Conservation Status table
-- Version 1.16, 06-Set-2012:
-- * Added attribute Banner to Metadata table
-- Version 1.17, 21-Oct-2012:
-- * Added attribute Collection Code to Distribution table
-- Version 1.18, 29-Nov-2015:
-- * Attribute Specific Authority changed to 50 characters in Taxa table
-- * Attribute Specific Authority changed to 50 characters in Synonyms table
-- Version 1.19, 30-Nov-2015:
-- * Attribute Vernacular Name changed to 40 characters in Common table
-- * Attribute Language changed to 30 characters in Common table
-- Version 1.20, 2-Dec-2015:
-- * Attribute Author changed to 128 characters in Bibliography table
-- * Attribute Detail changed to 512 characters in Bibliography table
-- Version 1.21, 3-Dec-2015:
-- * Added Literature Pointers table
-- * Changed attribute Resource Number to an auto-increment field in Resources table
-- Version 1.22, 9-Dec-2015:
-- * Added attribute Bibliographic number to Resources table
-- * Changed attribute Detail to text in Bibliography table
-- * Changed attribute Database identifier to an auto-increment field in Metadata table
-- Version 1.23, 15-Mar-2021:
-- * Added more taxonomic levels (Superclass, Infraclass, Superorder) to Higher Taxa table
-- Version 1.24, 6-Nov-2024:
-- * Removed attribute Population trend from Conservation Status table
-- * Removed attribute Region from Distribution table
-- ------------------------------------------------------------
-- --------------------------------------------------------
--
-- Structure of table `bibliography`
--
CREATE TABLE IF NOT EXISTS `bibliography` (
`B_NO` int(10) NOT NULL auto_increment,
`B_TYPE` varchar(20) default NULL,
`B_AUTHOR` varchar(128) default NULL,
`B_YEAR` int(10) default NULL,
`B_SEQUENCE` char(1) default NULL,
`B_TITLE` varchar(254) default NULL,
`B_DETAIL` text default NULL,
PRIMARY KEY (`B_NO`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=31 ;
-- --------------------------------------------------------
--
-- Structure of table `commonnames`
--
CREATE TABLE IF NOT EXISTS `commonnames` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`V_NAME` varchar(40) default NULL,
`V_COUNTRY` varchar(30) default NULL,
`V_LANGUAGE` varchar(30) default NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=8 ;
-- --------------------------------------------------------
--
-- Structure of table `descriptors`
--
CREATE TABLE IF NOT EXISTS `descriptors` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`D_NO` int(10) NOT NULL,
`D_CHARACTER` varchar(50) NOT NULL,
`D_UNIT` char(3) NOT NULL,
`D_STATE_NO` int(10) NOT NULL,
`D_STATE` varchar(50) NOT NULL,
`D_CHAR_TYPE` char(20) NOT NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=16 ;
-- --------------------------------------------------------
--
-- Structure of table `distribution`
--
CREATE TABLE IF NOT EXISTS `distribution` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`P_CODE` varchar(50) NOT NULL,
`P_CONTINENT` varchar(30) NOT NULL,
`P_REGION` varchar(30) NOT NULL,
`P_COUNTRY` varchar(30) NOT NULL,
`P_STATE` varchar(30) NOT NULL,
`P_COUNTY` varchar(30) NOT NULL,
`P_LOCALITY` varchar(160) NOT NULL,
`P_LATITUDE` float default NULL,
`P_LONGITUDE` float default NULL,
`P_I_STATUS` varchar(10) default NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=296 ;
-- --------------------------------------------------------
--
-- Structure of table `genome`
--
CREATE TABLE IF NOT EXISTS `genome` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`G_TAXID` int(10) NOT NULL,
`G_SEQID` int(10) NOT NULL,
`G_SEQ_TYPE` varchar(12) NOT NULL,
`G_DESCRIPTION` varchar(254) NOT NULL,
`G_SEQUENCE` text NOT NULL,
`B_NO` int(10) NOT NULL,
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=80 ;
--
-- Structure of table `habitats`
--
CREATE TABLE IF NOT EXISTS `habitats` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`H_PLACE` varchar(30) NOT NULL,
`H_HABITAT` varchar(78) NOT NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=9 ;
-- --------------------------------------------------------
--
-- Structure of table `highertaxa`
--
CREATE TABLE IF NOT EXISTS `highertaxa` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) unsigned NOT NULL,
`T_KINGDOM` varchar(50) default NULL,
`T_PHYLUM` varchar(50) default NULL,
`T_SUBPHYLUM` varchar(50) default NULL,
`T_SUPERCLASS` varchar(50) default NULL,
`T_CLASS` varchar(50) default NULL,
`T_INFRACLASS` varchar(50) default NULL,
`T_SUPERORDER` varchar(50) default NULL,
`T_ORDER` varchar(50) default NULL,
`T_SUBORDER` varchar(50) default NULL,
`T_SUPERFAMILY` varchar(50) default NULL,
`T_FAMILY` varchar(50) default NULL,
`T_SUBFAMILY` varchar(50) default NULL,
`T_TRIBE` varchar(50) default NULL,
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=14 ;
-- --------------------------------------------------------
--
-- Structure of table `metadata`
--
CREATE TABLE IF NOT EXISTS `metadata` (
`ID` int(10) NOT NULL auto_increment,
`M_ACRONYM` varchar(50) default NULL,
`M_TITLE` varchar(128) default NULL,
`M_DESCRIPTION` varchar(255) default NULL,
`M_SCOPE` varchar(20) default NULL,
`M_ENVIRONMENT` varchar(20) default NULL,
`M_COVERAGE` varchar(255) default NULL,
`M_AUTHOR` varchar(255) default NULL,
`M_VERSION` varchar(128) default NULL,
`M_DATE` date default NULL,
`M_PUBLISHER` varchar(128) default NULL,
`M_URL` varchar(128) default NULL,
`M_LOGO` varchar(128) default NULL,
`M_BANNER` varchar(128) default NULL,
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=2 ;
-- --------------------------------------------------------
--
-- Structure of table `notes`
--
CREATE TABLE IF NOT EXISTS `notes` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`N_NOTE` varchar(255) NOT NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=8 ;
-- --------------------------------------------------------
--
-- Structure of table `pointers`
--
CREATE TABLE IF NOT EXISTS `pointers` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`L_TYPE` varchar(20) NOT NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=10 ;
-- --------------------------------------------------------
--
-- Structure of table `resources`
--
CREATE TABLE IF NOT EXISTS `resources` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`R_TYPE` varchar(50) default NULL,
`R_RESOURCE` varchar(128) default NULL,
`R_CAPTION` varchar(255) default NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=10 ;
-- --------------------------------------------------------
--
-- Structure of table `status`
--
CREATE TABLE IF NOT EXISTS `status` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`C_STATUS` varchar(22) NOT NULL,
`C_TREND` varchar(12) NOT NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=2 ;
-- --------------------------------------------------------
--
-- Structure of table `synonyms`
--
CREATE TABLE IF NOT EXISTS `synonyms` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`S_STATUS` varchar(22) default NULL,
`S_GENUS` varchar(30) default NULL,
`S_G_AUTHOR` varchar(40) default NULL,
`S_SUBGENUS` varchar(30) default NULL,
`S_SPECIES` varchar(30) default NULL,
`S_S_AUTHOR` varchar(50) default NULL,
`S_RANK` varchar(7) default NULL,
`S_SUBSP` varchar(30) default NULL,
`S_SP_AUTHOR` varchar(40) default NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=15 ;
-- --------------------------------------------------------
--
-- Structure of table `taxa`
--
CREATE TABLE IF NOT EXISTS `taxa` (
`T_NO` int(10) NOT NULL auto_increment,
`T_STATUS` varchar(22) default NULL,
`T_GENUS` varchar(30) default NULL,
`T_G_AUTHOR` varchar(40) default NULL,
`T_SUBGENUS` varchar(30) default NULL,
`T_SPECIES` varchar(30) default NULL,
`T_S_AUTHOR` varchar(50) default NULL,
`T_RANK` varchar(7) default NULL,
`T_SUBSP` varchar(30) default NULL,
`T_SP_AUTHOR` varchar(40) default NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`T_NO`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=19 ;
-- --------------------------------------------------------
--
-- Structure of table `uses`
--
CREATE TABLE IF NOT EXISTS `uses` (
`ID` int(10) NOT NULL auto_increment,
`T_NO` int(10) NOT NULL,
`U_NAME` varchar(20) default NULL,
`U_TYPE` varchar(30) default NULL,
`U_PART` varchar(40) default NULL,
`B_NO` int(10) NOT NULL default '0',
PRIMARY KEY (`ID`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=12 ;