diff --git a/docs/articles/calibration-data.html b/docs/articles/calibration-data.html index da0265e..12f7c99 100644 --- a/docs/articles/calibration-data.html +++ b/docs/articles/calibration-data.html @@ -109,7 +109,7 @@

Calibration data for CREST

Manuel Chevalier

-

2023-10-09

+

2023-11-10

Source: vignettes/calibration-data.Rmd diff --git a/docs/articles/community.html b/docs/articles/community.html index cbf3f2c..f094eb4 100644 --- a/docs/articles/community.html +++ b/docs/articles/community.html @@ -109,7 +109,7 @@

The crestr community

Manuel Chevalier

-

2023-10-09

+

2023-11-10

Source: vignettes/community.Rmd diff --git a/docs/articles/databasing-with-crestr.html b/docs/articles/databasing-with-crestr.html index ef4fde7..9f4fb50 100644 --- a/docs/articles/databasing-with-crestr.html +++ b/docs/articles/databasing-with-crestr.html @@ -110,7 +110,7 @@

Manipulating the gbif4crest calibration

Manuel Chevalier

-

2023-10-09

+

2023-11-10

Source: vignettes/databasing-with-crestr.Rmd diff --git a/docs/articles/get-started.html b/docs/articles/get-started.html index e70e95a..4de0f74 100644 --- a/docs/articles/get-started.html +++ b/docs/articles/get-started.html @@ -109,7 +109,7 @@

Get started

Manuel Chevalier

-

2023-10-09

+

2023-11-10

Source: vignettes/get-started.Rmd diff --git a/docs/articles/get-started_files/figure-html/plot-1.png b/docs/articles/get-started_files/figure-html/plot-1.png index 1e6b170..70c1eb2 100644 Binary files a/docs/articles/get-started_files/figure-html/plot-1.png and b/docs/articles/get-started_files/figure-html/plot-1.png differ diff --git a/docs/articles/get-started_files/figure-html/plot-2.png b/docs/articles/get-started_files/figure-html/plot-2.png index 7cc5efe..c3453c4 100644 Binary files a/docs/articles/get-started_files/figure-html/plot-2.png and b/docs/articles/get-started_files/figure-html/plot-2.png differ diff --git a/docs/articles/limpopo.html b/docs/articles/limpopo.html index a08bd29..c8bd013 100644 --- a/docs/articles/limpopo.html +++ b/docs/articles/limpopo.html @@ -110,7 +110,7 @@

Mean Annual Temperature reconstruction from

Manuel Chevalier

-

2023-10-09

+

2023-11-10

Source: vignettes/limpopo.Rmd diff --git a/docs/articles/technicalities.html b/docs/articles/technicalities.html index cefb631..585f902 100644 --- a/docs/articles/technicalities.html +++ b/docs/articles/technicalities.html @@ -109,7 +109,7 @@

Formatting the data for crestr

Manuel Chevalier

-

2023-10-09

+

2023-11-10

Source: vignettes/technicalities.Rmd diff --git a/docs/articles/theory.html b/docs/articles/theory.html index 193c0e1..7c29464 100644 --- a/docs/articles/theory.html +++ b/docs/articles/theory.html @@ -109,7 +109,7 @@

A bit of Theory

Manuel Chevalier

-

2023-10-09

+

2023-11-10

Source: vignettes/theory.Rmd diff --git a/docs/articles/warnings.html b/docs/articles/warnings.html index c5de0fe..0fee77b 100644 --- a/docs/articles/warnings.html +++ b/docs/articles/warnings.html @@ -109,7 +109,7 @@

Understanding warnings in crestr

Manuel Chevalier

-

2023-10-09

+

2023-11-10

Source: vignettes/warnings.Rmd diff --git a/docs/index.html b/docs/index.html index 6521102..7f34f8d 100644 --- a/docs/index.html +++ b/docs/index.html @@ -144,7 +144,7 @@

Example applications

-

(A) density of presence records available in my calibration dataset upscaled at a 1° resolution. The diamonds represent the location of the pollen records used to generate the reconstructions presented in B-D, and the coloured boxes represent the extent of their respective calibration zones. (B) Annual precipitation reconstructions from Lake Van, Turkey (Chevalier, 2019), (C) Mean annual temperature reconstruction from Laguna de Fùquene, Colombia (unpublished) and (D) Mean Annual temperature reconstruction from marine core MD96-2048 (Chevalier et al., 2021).

+

(A) density of presence records available in my calibration dataset upscaled at a 1° resolution. The diamonds represent the location of the pollen records used to generate the reconstructions presented in B-D, and the coloured boxes represent the extent of their respective calibration zones. (B) Annual precipitation reconstructions from Lake Van, Turkey (Chevalier, 2019), (C) Mean annual temperature reconstruction from Laguna Fùquene, Colombia (unpublished) and (D) Mean Annual temperature reconstruction from marine core MD96-2048 (Chevalier et al., 2021).

CREST in the scientific literature @@ -154,6 +154,7 @@

CREST in the scientific literature 2023 diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml index 23c7191..abf9315 100644 --- a/docs/pkgdown.yml +++ b/docs/pkgdown.yml @@ -10,5 +10,5 @@ articles: technicalities: technicalities.html theory: theory.html warnings: warnings.html -last_built: 2023-10-09T17:37Z +last_built: 2023-11-10T08:55Z diff --git a/docs/reference/calib_clim_space.html b/docs/reference/calib_clim_space.html index 67db414..026b74e 100644 --- a/docs/reference/calib_clim_space.html +++ b/docs/reference/calib_clim_space.html @@ -119,7 +119,7 @@

Examples

#> [1] 0 2 4 6 8 10 12 14 16 18 20 22 24 26 28 30 32 #> #> $k2 -#> [1] 277 262 247 294 257 244 289 232 248 277 265 290 264 285 261 8 0 +#> [1] 289 251 273 269 260 248 232 251 285 268 272 280 282 255 266 19 0 #>
diff --git a/docs/reference/fit_pdfsp-1.png b/docs/reference/fit_pdfsp-1.png index 3717039..52c6c5e 100644 Binary files a/docs/reference/fit_pdfsp-1.png and b/docs/reference/fit_pdfsp-1.png differ diff --git a/docs/reference/plot.crestObj-1.png b/docs/reference/plot.crestObj-1.png index f5246cc..f812fa2 100644 Binary files a/docs/reference/plot.crestObj-1.png and b/docs/reference/plot.crestObj-1.png differ diff --git a/docs/reference/plot.crestObj-2.png b/docs/reference/plot.crestObj-2.png index 57d84aa..37cc1b2 100644 Binary files a/docs/reference/plot.crestObj-2.png and b/docs/reference/plot.crestObj-2.png differ diff --git a/docs/reference/plot_combinedPDFs.html b/docs/reference/plot_combinedPDFs.html index 31cf76f..23c5eb3 100644 --- a/docs/reference/plot_combinedPDFs.html +++ b/docs/reference/plot_combinedPDFs.html @@ -210,9 +210,33 @@

Examples

data(reconstr) plot_combinedPDFs(reconstr, ages=c(6,9), climate='bio12') +#> [1] 1 +#> [1] 2 +#> [1] 3 +#> [1] 4 +#> [1] 5 +#> [1] 6 +#> [1] 1 +#> [1] 2 +#> [1] 3 +#> [1] 4 +#> [1] 5 +#> [1] 6 +#> [1] 1 +#> [1] 2 +#> [1] 3 +#> [1] 4 +#> [1] 5 +#> [1] 6 +#> [1] 1 +#> [1] 2 +#> [1] 3 +#> [1] 4 +#> [1] 5 +#> [1] 6 diff --git a/index.md b/index.md index fff8b59..35e063d 100644 --- a/index.md +++ b/index.md @@ -55,6 +55,7 @@ _(A) density of presence records available in my calibration dataset upscaled at - **2023** + - Hui, Z., Wei, X., Xue, Z., Zhao, X., Chevalier, M., Lu, X., Zhang, J., Peng, T., Chen, Y., Chen, P., 2023,Middle Miocene Evolution of East Asian Summer Monsoon Precipitation in the Northeast Part of the Tibetan Plateau Based on a Quantitative Analysis of Palynological Records. Palaeogeography, Palaeoclimatology, Palaeoecology, pp 111808. [10.1016/j.palaeo.2023.111808](https://doi.org/10.1016/j.palaeo.2023.111808). - Hui, Z., Liu, J., Chevalier, M., Wei, X., Chen, P., Zhan, J., Peng, T., Zhou, X., 2023, Multiple forcing on Late Miocene East Asian Summer Monsoon Precipitation Variability in NE Tibetan Plateau. CATENA 221, 106752. [10.1016/j.catena.2022.106752](https://doi.org/10.1016/j.catena.2022.106752). - **2022** - Gibson, M.E., McCoy, J., O’Keefe, J.M.K., Nuñez Otaño, N.B., Warny, S., Pound, M.J., 2022, Reconstructing Terrestrial Paleoclimates: A Comparison of the Co‐Existence Approach, Bayesian and Probability Reconstruction Techniques Using the UK Neogene. Paleoceanog. and Paleoclimatol. 37, e2021PA004358. [10.1029/2021PA004358](https://doi.org/10.1029/2021PA004358)