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modules.json
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{
"name": "extractmag",
"homePage": "https://github.com/tpillone/extractmag",
"repos": {
"https://github.com/nf-core/modules.git": {
"modules": {
"nf-core": {
"bwamem2/index": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["modules"]
},
"cat/cat": {
"branch": "master",
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905",
"installed_by": ["modules"]
},
"checkm/lineagewf": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": ["modules"]
},
"custom/dumpsoftwareversions": {
"branch": "master",
"git_sha": "b6d4d476aee074311c89d82a69c1921bd70c8180",
"installed_by": ["modules"]
},
"custom/sratoolsncbisettings": {
"branch": "master",
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905",
"installed_by": ["modules", "fastq_download_prefetch_fasterqdump_sratools"]
},
"fastp": {
"branch": "master",
"git_sha": "20a508676f40d0fd3f911ac595af91ec845704c4",
"installed_by": ["modules"]
},
"fastqc": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": ["modules"]
},
"flash": {
"branch": "master",
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
"installed_by": ["modules"]
},
"gtdbtk/classifywf": {
"branch": "master",
"git_sha": "898259a38563f29c3c5d2490876019ec2d6f49c5",
"installed_by": ["modules"]
},
"megahit": {
"branch": "master",
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905",
"installed_by": ["modules"]
},
"minia": {
"branch": "master",
"git_sha": "5e34754d42cd2d5d248ca8673c0a53cdf5624905",
"installed_by": ["modules"]
},
"motus/profile": {
"branch": "master",
"git_sha": "c8e35eb2055c099720a75538d1b8adb3fb5a464c",
"installed_by": ["modules"]
},
"multiqc": {
"branch": "master",
"git_sha": "ee80d14721e76e2e079103b8dcd5d57129e584ba",
"installed_by": ["modules"]
},
"quast": {
"branch": "master",
"git_sha": "0f8a77ff00e65eaeebc509b8156eaa983192474b",
"installed_by": ["modules"]
},
"spades": {
"branch": "master",
"git_sha": "b6d4d476aee074311c89d82a69c1921bd70c8180",
"installed_by": ["modules"]
},
"sratools/fasterqdump": {
"branch": "master",
"git_sha": "6712754854ae2832abfff3f0800cdb4a6a60bfca",
"installed_by": ["modules", "fastq_download_prefetch_fasterqdump_sratools"]
},
"sratools/prefetch": {
"branch": "master",
"git_sha": "6712754854ae2832abfff3f0800cdb4a6a60bfca",
"installed_by": ["modules", "fastq_download_prefetch_fasterqdump_sratools"]
}
}
},
"subworkflows": {
"nf-core": {
"fastq_download_prefetch_fasterqdump_sratools": {
"branch": "master",
"git_sha": "6712754854ae2832abfff3f0800cdb4a6a60bfca",
"installed_by": ["subworkflows"]
}
}
}
}
}
}