DESCRIPTION

Package: MLMOI
Type: Package
Title: Estimating Frequencies, Prevalence and Multiplicity of Infection
Version: 0.1.2
Authors@R: c(person("Meraj", "Hashemi", role = c("cre", "aut", "com"), email = "meraj.hashemi.esh@gmail.com"),
             person("Kristan", "Schneider", role = c("aut", "ths"), email = "kristan.schneider@hs-mittweida.de"))
Maintainer: Meraj Hashemi <meraj.hashemi.esh@gmail.com>
Description: The implemented methods reach out to scientists that seek to estimate multiplicity of infection (MOI) and lineage (allele) frequencies and prevalences at molecular markers using the maximum-likelihood method described in Schneider (2018) <doi:10.1371/journal.pone.0194148>, and Schneider and Escalante (2014) <doi:10.1371/journal.pone.0097899>. Users can import data from Excel files in various formats, and perform maximum-likelihood estimation on the imported data by the package's moimle() function.
Depends: R (>= 4.3.0)
Imports:
    openxlsx (>= 4.2.5.2),
    Rdpack (>= 2.6),
    Rmpfr (>= 0.9-3),
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Suggests: 
    knitr,
    rmarkdown
VignetteBuilder: knitr
RdMacros: Rdpack