forked from viamrobotics/rdk
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathdata.go
337 lines (303 loc) · 8.41 KB
/
data.go
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
package cli
import (
"bufio"
"bytes"
"compress/gzip"
"context"
"encoding/json"
"fmt"
"io"
"os"
"path/filepath"
"strconv"
"strings"
"sync"
"sync/atomic"
"time"
"github.com/pkg/errors"
datapb "go.viam.com/api/app/data/v1"
"google.golang.org/protobuf/encoding/protojson"
)
const (
dataDir = "data"
metadataDir = "metadata"
defaultParallelDownloads = 100
maxRetryCount = 5
logEveryN = 100
maxLimit = 100
)
// BinaryData downloads binary data matching filter to dst.
func (c *AppClient) BinaryData(dst string, filter *datapb.Filter, parallelDownloads uint) error {
if err := c.ensureLoggedIn(); err != nil {
return err
}
if err := makeDestinationDirs(dst); err != nil {
return errors.Wrapf(err, "error creating destination directories")
}
if parallelDownloads == 0 {
parallelDownloads = defaultParallelDownloads
}
ids := make(chan string, parallelDownloads)
// Give channel buffer of 1+parallelDownloads because that is the number of goroutines that may be passing an
// error into this channel (1 get ids routine + parallelDownloads download routines).
errs := make(chan error, 1+parallelDownloads)
ctx, cancel := context.WithCancel(context.Background())
defer cancel()
var wg sync.WaitGroup
// In one routine, get all IDs matching the filter and pass them into ids.
wg.Add(1)
go func() {
defer wg.Done()
// If limit is too high the request can time out, so limit each call to a maximum value of 100.
var limit uint
if parallelDownloads > maxLimit {
limit = maxLimit
} else {
limit = parallelDownloads
}
if err := getMatchingBinaryIDs(ctx, c.dataClient, filter, ids, limit); err != nil {
errs <- err
cancel()
}
}()
// In parallel, read from ids and download the binary for each id in batches of defaultParallelDownloads.
wg.Add(1)
go func() {
defer wg.Done()
var nextID string
var done bool
var numFilesDownloaded atomic.Int32
var downloadWG sync.WaitGroup
for {
for i := uint(0); i < parallelDownloads; i++ {
if err := ctx.Err(); err != nil {
errs <- err
cancel()
done = true
break
}
nextID = <-ids
// If nextID is zero value, the channel has been closed and there are no more IDs to be read.
if nextID == "" {
done = true
break
}
downloadWG.Add(1)
go func(id string) {
defer downloadWG.Done()
err := downloadBinary(ctx, c.dataClient, dst, id)
if err != nil {
errs <- err
cancel()
done = true
}
numFilesDownloaded.Add(1)
if numFilesDownloaded.Load()%logEveryN == 0 {
fmt.Fprintf(c.c.App.Writer, "downloaded %d files\n", numFilesDownloaded.Load())
}
}(nextID)
}
downloadWG.Wait()
if done {
break
}
}
if numFilesDownloaded.Load()%logEveryN != 0 {
fmt.Fprintf(c.c.App.Writer, "downloaded %d files to %s\n", numFilesDownloaded.Load(), dst)
}
}()
wg.Wait()
close(errs)
if err := <-errs; err != nil {
return err
}
return nil
}
// getMatchingIDs queries client for all BinaryData matching filter, and passes each of their ids into ids.
func getMatchingBinaryIDs(ctx context.Context, client datapb.DataServiceClient, filter *datapb.Filter,
ids chan string, limit uint,
) error {
var last string
defer close(ids)
for {
if err := ctx.Err(); err != nil {
return err
}
resp, err := client.BinaryDataByFilter(ctx, &datapb.BinaryDataByFilterRequest{
DataRequest: &datapb.DataRequest{
Filter: filter,
Limit: uint64(limit),
Last: last,
},
CountOnly: false,
IncludeBinary: false,
})
if err != nil {
return err
}
// If no data is returned, there is no more data.
if len(resp.GetData()) == 0 {
return nil
}
last = resp.GetLast()
for _, bd := range resp.GetData() {
ids <- bd.GetMetadata().GetId()
}
}
}
func downloadBinary(ctx context.Context, client datapb.DataServiceClient, dst, id string) error {
var resp *datapb.BinaryDataByIDsResponse
var err error
for count := 0; count < maxRetryCount; count++ {
resp, err = client.BinaryDataByIDs(ctx, &datapb.BinaryDataByIDsRequest{
FileIds: []string{id},
IncludeBinary: true,
})
if err == nil {
break
}
}
if err != nil {
return errors.Wrapf(err, "received error from server")
}
data := resp.GetData()
if len(data) != 1 {
return errors.Errorf("expected a single response, received %d", len(data))
}
datum := data[0]
mdJSONBytes, err := protojson.Marshal(datum.GetMetadata())
if err != nil {
return err
}
timeRequested := datum.GetMetadata().GetTimeRequested().AsTime().Format(time.RFC3339Nano)
var fileName string
if datum.GetMetadata().GetFileName() != "" {
// Can use file ext directly from metadata.
fileName = timeRequested + "_" + strings.TrimSuffix(datum.GetMetadata().GetFileName(), datum.GetMetadata().GetFileExt())
} else {
fileName = timeRequested + "_" + datum.GetMetadata().GetId()
}
//nolint:gosec
jsonFile, err := os.Create(filepath.Join(dst, metadataDir, fileName+".json"))
if err != nil {
return err
}
if _, err := jsonFile.Write(mdJSONBytes); err != nil {
return err
}
gzippedBytes := datum.GetBinary()
r, err := gzip.NewReader(bytes.NewBuffer(gzippedBytes))
if err != nil {
return err
}
//nolint:gosec
dataFile, err := os.Create(filepath.Join(dst, dataDir, fileName+datum.GetMetadata().GetFileExt()))
if err != nil {
return errors.Wrapf(err, fmt.Sprintf("error creating file for datum %s", datum.GetMetadata().GetId()))
}
//nolint:gosec
if _, err := io.Copy(dataFile, r); err != nil {
return err
}
if err := r.Close(); err != nil {
return err
}
return nil
}
// TabularData downloads binary data matching filter to dst.
func (c *AppClient) TabularData(dst string, filter *datapb.Filter) error {
if err := c.ensureLoggedIn(); err != nil {
return err
}
if err := makeDestinationDirs(dst); err != nil {
return errors.Wrapf(err, "error creating destination directories")
}
var err error
var resp *datapb.TabularDataByFilterResponse
// TODO: [DATA-640] Support export in additional formats.
//nolint:gosec
dataFile, err := os.Create(filepath.Join(dst, dataDir, "data"+".ndjson"))
if err != nil {
return errors.Wrapf(err, "error creating data file")
}
w := bufio.NewWriter(dataFile)
fmt.Fprintf(c.c.App.Writer, "Downloading..")
var last string
var metadataIdx int
for {
for count := 0; count < maxRetryCount; count++ {
resp, err = c.dataClient.TabularDataByFilter(context.Background(), &datapb.TabularDataByFilterRequest{
DataRequest: &datapb.DataRequest{
Filter: filter,
Limit: maxLimit,
Last: last,
},
CountOnly: false,
})
fmt.Fprintf(c.c.App.Writer, ".")
if err == nil {
break
}
}
if err != nil {
return err
}
last = resp.GetLast()
mds := resp.GetMetadata()
if len(mds) == 0 {
break
}
for _, md := range mds {
mdJSONBytes, err := protojson.Marshal(md)
if err != nil {
return errors.Wrap(err, "error marshaling metadata")
}
//nolint:gosec
mdFile, err := os.Create(filepath.Join(dst, metadataDir, strconv.Itoa(metadataIdx)+".json"))
if err != nil {
return errors.Wrapf(err, fmt.Sprintf("error creating metadata file for metadata index %d", metadataIdx))
}
if _, err := mdFile.Write(mdJSONBytes); err != nil {
return errors.Wrapf(err, "error writing metadata file %s", mdFile.Name())
}
if err := mdFile.Close(); err != nil {
return errors.Wrapf(err, "error closing metadata file %s", mdFile.Name())
}
metadataIdx++
}
data := resp.GetData()
for _, datum := range data {
// Write everything as json for now.
d := datum.GetData()
if d == nil {
continue
}
m := d.AsMap()
m["TimeRequested"] = datum.GetTimeRequested()
m["TimeReceived"] = datum.GetTimeReceived()
m["MetadataIndex"] = datum.GetMetadataIndex()
j, err := json.Marshal(m)
if err != nil {
return errors.Wrap(err, "error marshaling json response")
}
_, err = w.Write(append(j, []byte("\n")...))
if err != nil {
return errors.Wrapf(err, "error writing reading to file %s", dataFile.Name())
}
}
}
fmt.Fprintf(c.c.App.Writer, "\n")
if err := w.Flush(); err != nil {
return errors.Wrapf(err, "error flushing writer for %s", dataFile.Name())
}
return nil
}
func makeDestinationDirs(dst string) error {
if err := os.MkdirAll(filepath.Join(dst, dataDir), 0o700); err != nil {
return err
}
if err := os.MkdirAll(filepath.Join(dst, metadataDir), 0o700); err != nil {
return err
}
return nil
}