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Defining white matter pathways using tractography on diffusion weighted MRIs

Collection of scripts, write-ups (biorxiv) and supporting data like filter regions etc. in collaboration with Kurt Schilling et al. from Vanderbilt.

Text on data from the biorxiv. The diffusion data for this study were selected from the Human Connectome Project test-retest database [1]. A total of three subjects (HCP IDs: 144226, 103818, 783462) were chosen that had repeat diffusion MRI scans, resulting in six high-quality datasets, free of any significant artifacts. This dataset was chosen as a compromise between quantification and inclusivity - the use of this small database still provides enough information to detect and quantify the variability among results with great enough participation across laboratories and scientists.

[1] Glasser, M.F., et al., The Human Connectome Project's neuroimaging approach. Nat Neurosci, 2016. 19(9): p. 1175-87

Please cite Schilling et al. biorxiv if you find any material in this repository useful.