Fixed sign comparison error

nanoporetech · Jun 3, 2024 · 1d389d0 · 1d389d0
1 parent 03d94f3
commit 1d389d0
Showing 1 changed file with 3 additions and 2 deletions.
diff --git a/dorado/read_pipeline/ScalerNode.cpp b/dorado/read_pipeline/ScalerNode.cpp
@@ -141,7 +141,8 @@ void ScalerNode::input_thread_fn() {
         int trim_start = 0;
         if (is_rna_model) {
             trim_start = determine_rna_adapter_pos(*read, m_model_type);
-            if (m_trim_rna_adapter && trim_start < read->read_common.get_raw_data_samples()) {
+            if (m_trim_rna_adapter &&
+                size_t(trim_start) < read->read_common.get_raw_data_samples()) {
                 read->read_common.raw_data =
                         read->read_common.raw_data.index({Slice(trim_start, at::indexing::None)});
                 read->read_common.rna_adapter_end_signal_pos = 0;
@@ -241,7 +242,7 @@ void ScalerNode::input_thread_fn() {
                         utils::DEFAULT_TRIM_MIN_ELEMENTS);
             }
 
-            if (trim_start < read->read_common.get_raw_data_samples()) {
+            if (size_t(trim_start) < read->read_common.get_raw_data_samples()) {
                 read->read_common.raw_data =
                         read->read_common.raw_data.index({Slice(trim_start, at::indexing::None)});
             } else {