- Fixes bug in sqp_seqfile.pm:sqf_FeatureTableParse() related to single nucleotide coordinate spans.
- Replaces printf with print in ofile_FAIL because printf would format strings if they had '%' characters in them.
- Adds ofile_GetDirPath()
- Removes 'require' statements and adds explanatory comment
- Update of test file t/do-prove-all-tests-from-vadr.sh
- No changes to any perl module files relative to 0.06.
- sqp_utils.pm:utl_ConcatenateListOfFiles() is now more robust. Previous version could, in extreme cases, create 'cat' calls that exceeded number of allowed characters in a command. Documented as github issue#2. Tests added to the testsuite to cover this.
For more information, see the git log for the develop branch.