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Copy pathva-noro.9.vadr.ftr
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va-noro.9.vadr.ftr
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# seq seq ftr ftr ftr ftr par seq model ftr
#idx name len p/f model type name len idx idx str n_from n_to n_instp trc 5'N 3'N p_from p_to p_instp p_sc nsa nsn coords coords alerts
#--- ---------- ---- ---- --------- ----------- ------------------------- ---- --- --- --- ------ ---- ------- ----- --- --- ------ ---- ---------------- ---- --- --- ------------ ------------ ------
1.1 KY887602.1 7547 PASS NC_039477 gene ORF1 5083 1 -1 + 1 5083 - 5' 0 0 - - - - 1 0 1..5083:+ 22..5104:+ -
1.2 KY887602.1 7547 PASS NC_039477 CDS nonstructural_polyprotein 5083 2 -1 + 1 5083 - 5' 0 0 2 5080 - 9094 1 0 1..5083:+ 22..5104:+ -
1.3 KY887602.1 7547 PASS NC_039477 gene ORF2 1623 3 -1 + 5064 6686 - no 0 0 - - - - 1 0 5064..6686:+ 5085..6707:+ -
1.4 KY887602.1 7547 PASS NC_039477 CDS VP1 1623 4 -1 + 5064 6686 - no 0 0 5064 6683 - 2878 1 0 5064..6686:+ 5085..6707:+ -
1.5 KY887602.1 7547 PASS NC_039477 gene ORF3 807 5 -1 + 6686 7492 - no 0 0 - - - - 1 0 6686..7492:+ 6707..7513:+ -
1.6 KY887602.1 7547 PASS NC_039477 CDS VP2 807 6 -1 + 6686 7492 - no 0 0 6686 7486 - 1393 1 0 6686..7492:+ 6707..7513:+ -
1.7 KY887602.1 7547 PASS NC_039477 mat_peptide p48 979 7 2 + 1 979 - 5' 0 0 - - - - 1 0 1..979:+ 22..1000:+ -
1.8 KY887602.1 7547 PASS NC_039477 mat_peptide NTPase 1098 8 2 + 980 2077 - no 0 0 - - - - 1 0 980..2077:+ 1001..2098:+ -
1.9 KY887602.1 7547 PASS NC_039477 mat_peptide p22 531 9 2 + 2078 2608 - no 0 0 - - - - 1 0 2078..2608:+ 2099..2629:+ -
1.10 KY887602.1 7547 PASS NC_039477 mat_peptide VPg 399 10 2 + 2609 3007 - no 0 0 - - - - 1 0 2609..3007:+ 2630..3028:+ -
1.11 KY887602.1 7547 PASS NC_039477 mat_peptide Pro 543 11 2 + 3008 3550 - no 0 0 - - - - 1 0 3008..3550:+ 3029..3571:+ -
1.12 KY887602.1 7547 PASS NC_039477 mat_peptide RdRp 1530 12 2 + 3551 5080 - no 0 0 - - - - 1 0 3551..5080:+ 3572..5101:+ -
#
2.1 KT818729.1 243 PASS NC_044854 gene ORF1 243 1 -1 + 1 243 - 5'&3' 0 0 - - - - 1 0 1..243:+ 4625..4867:+ -
2.2 KT818729.1 243 PASS NC_044854 CDS nonstructural_polyprotein 243 2 -1 + 1 243 - 5'&3' 0 0 1 243 - 444 1 0 1..243:+ 4625..4867:+ -
2.3 KT818729.1 243 PASS NC_044854 mat_peptide RdRp 243 12 2 + 1 243 - 5'&3' 0 0 - - - - 1 0 1..243:+ 4625..4867:+ -
#
3.1 EU437710.1 291 PASS NC_001959 gene ORF1 13 1 -1 + 1 13 - 5' 0 0 - - - - 1 0 1..13:+ 5362..5374:+ -
3.2 EU437710.1 291 PASS NC_001959 CDS nonstructural_polyprotein 13 2 -1 + 1 13 - 5' 0 0 - - - - 1 0 1..13:+ 5362..5374:+ -
3.3 EU437710.1 291 PASS NC_001959 gene ORF2 291 3 -1 + 1 291 - 5'&3' 0 0 - - - - 1 0 1..291:+ 5362..5652:+ -
3.4 EU437710.1 291 PASS NC_001959 CDS VP1 291 4 -1 + 1 291 - 5'&3' 0 0 3 290 - 485 1 0 1..291:+ 5362..5652:+ -
3.5 EU437710.1 291 PASS NC_001959 mat_peptide RdRp 10 12 2 + 1 10 - 5' 0 0 - - - - 1 0 1..10:+ 5362..5371:+ -
#
4.1 DQ288307.1 1094 PASS NC_029645 gene ORF1 210 1 -1 + 1 210 - 5' 0 0 - - - - 1 0 1..210:+ 4867..5076:+ -
4.2 DQ288307.1 1094 PASS NC_029645 CDS nonstructural_polyprotein 210 2 -1 + 1 210 - 5' 0 0 1 207 - 387 1 0 1..210:+ 4867..5076:+ -
4.3 DQ288307.1 1094 PASS NC_029645 gene ORF2 898 3 -1 + 197 1094 - 3' 0 0 - - - - 1 0 197..1094:+ 5063..5960:+ -
4.4 DQ288307.1 1094 PASS NC_029645 CDS VP1 898 4 -1 + 197 1094 - 3' 0 0 197 1093 - 1515 1 0 197..1094:+ 5063..5960:+ -
4.5 DQ288307.1 1094 PASS NC_029645 mat_peptide RdRp 207 12 2 + 1 207 - 5' 0 0 - - - - 1 0 1..207:+ 4867..5073:+ -
#
5.1 AY237464.1 255 PASS NC_039477 gene ORF2 255 3 -1 + 1 255 - 5'&3' 0 0 - - - - 1 0 1..255:+ 5112..5366:+ -
5.2 AY237464.1 255 PASS NC_039477 CDS VP1 255 4 -1 + 1 255 - 5'&3' 0 0 1 255 - 433 1 0 1..255:+ 5112..5366:+ -
#
6.1 KF475958.1 275 PASS NC_044854 gene ORF2 275 3 -1 + 1 275 - 5'&3' 0 0 - - - - 1 0 1..275:+ 5379..5653:+ -
6.2 KF475958.1 275 PASS NC_044854 CDS VP1 275 4 -1 + 1 275 - 5'&3' 0 0 1 273 - 460 1 0 1..275:+ 5379..5653:+ -
#
7.1 AB713840.1 347 PASS NC_008311 gene ORF1 14 1 -1 + 1 14 - 5' 0 0 - - - - 1 0 1..14:+ 5056..5069:+ -
7.2 AB713840.1 347 PASS NC_008311 CDS nonstructural_polyprotein 14 2 -1 + 1 14 - 5' 0 0 - - - - 1 0 1..14:+ 5056..5069:+ -
7.3 AB713840.1 347 PASS NC_008311 gene ORF2 347 3 -1 + 1 347 - 3' 0 0 - - - - 1 0 1..347:+ 5056..5402:+ -
7.4 AB713840.1 347 PASS NC_008311 CDS VP1 347 4 -1 + 1 347 - 3' 0 0 1 345 - 592 1 0 1..347:+ 5056..5402:+ -
7.5 AB713840.1 347 PASS NC_008311 gene ORF4 334 5 -1 + 14 347 - 3' 0 0 - - - - 1 0 14..347:+ 5069..5402:+ -
7.6 AB713840.1 347 PASS NC_008311 CDS VF1 334 6 -1 + 14 347 - 3' 0 0 14 346 - 454 1 0 14..347:+ 5069..5402:+ -
7.7 AB713840.1 347 PASS NC_008311 mat_peptide RdRp 11 14 2 + 1 11 - 5' 0 0 - - - - 1 0 1..11:+ 5056..5066:+ -
#
8.1 JN585032.1 286 PASS NC_029645 gene ORF1 286 1 -1 + 1 286 - 5'&3' 0 0 - - - - 1 0 1..286:+ 4722..5007:+ -
8.2 JN585032.1 286 PASS NC_029645 CDS nonstructural_polyprotein 286 2 -1 + 1 286 - 5'&3' 0 0 2 286 - 518 1 0 1..286:+ 4722..5007:+ -
8.3 JN585032.1 286 PASS NC_029645 mat_peptide RdRp 286 12 2 + 1 286 - 5'&3' 0 0 - - - - 1 0 1..286:+ 4722..5007:+ -
#
9.1 JN975492.1 7286 FAIL NC_008311 gene ORF1 5044 1 -1 + 1 5044 - 5' 0 0 - - - - 1 0 1..5044:+ 23..5069:+ -
9.2 JN975492.1 7286 FAIL NC_008311 CDS nonstructural_polyprotein 5044 2 -1 + 1 5044 - 5' 0 0 2 5041 - 7757 1 0 1..5044:+ 23..5069:+ -
9.3 JN975492.1 7286 FAIL NC_008311 gene ORF2 1626 3 -1 + 5031 6656 - no 0 0 - - - - 1 0 5031..6656:+ 5056..6681:+ -
9.4 JN975492.1 7286 FAIL NC_008311 CDS VP1 1626 4 -1 + 5031 6656 - no 0 0 5031 6653 - 2466 1 0 5031..6656:+ 5056..6681:+ -
9.5 JN975492.1 7286 FAIL NC_008311 gene ORF4 642 5 -1 + 5044 5685 - no 0 0 - - - - 1 0 5044..5685:+ 5069..5710:+ -
9.6 JN975492.1 7286 FAIL NC_008311 CDS VF1 642 6 -1 + 5044 5685 5277 no 0 0 5044 5649 seq:5275..5277:+ 525 1 0 5044..5685:+ 5069..5710:+ MUTATION_AT_END(mutendcd),CDS_HAS_STOP_CODON(cdsstopn),CDS_HAS_STOP_CODON(cdsstopp),INDEFINITE_ANNOTATION_END(indf3pst)
9.7 JN975492.1 7286 FAIL NC_008311 gene ORF3 627 7 -1 + 6656 7282 - no 0 0 - - - - 1 0 6656..7282:+ 6681..7307:+ -
9.8 JN975492.1 7286 FAIL NC_008311 CDS VP2 627 8 -1 + 6656 7282 - no 0 0 6710 7279 - 731 1 0 6656..7282:+ 6681..7307:+ INDEFINITE_ANNOTATION_START(indf5pst)
9.9 JN975492.1 7286 FAIL NC_008311 mat_peptide p48 1000 9 2 + 1 1000 - 5' 0 0 - - - - 1 0 1..1000:+ 23..1028:+ -
9.10 JN975492.1 7286 FAIL NC_008311 mat_peptide NTPase 1092 10 2 + 1001 2092 - no 0 0 - - - - 1 0 1001..2092:+ 1029..2120:+ -
9.11 JN975492.1 7286 FAIL NC_008311 mat_peptide p22 498 11 2 + 2093 2590 - no 0 0 - - - - 1 0 2093..2590:+ 2121..2615:+ -
9.12 JN975492.1 7286 FAIL NC_008311 mat_peptide VPg 375 12 2 + 2591 2965 - no 0 0 - - - - 1 0 2591..2965:+ 2616..2987:+ -
9.13 JN975492.1 7286 FAIL NC_008311 mat_peptide Pro 549 13 2 + 2966 3514 - no 0 0 - - - - 1 0 2966..3514:+ 2988..3536:+ -
9.14 JN975492.1 7286 FAIL NC_008311 mat_peptide RdRp 1527 14 2 + 3515 5041 - no 0 0 - - - - 1 0 3515..5041:+ 3537..5066:+ -