diff --git a/CHANGELOG.md b/CHANGELOG.md index fe350b46..aa3eb2b3 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -22,6 +22,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 ### Removed +- Remove fusionGDB from documentation and fusion-report download stubs + ## v3.0.2 - [2024-04-10] ### Added diff --git a/docs/usage.md b/docs/usage.md index 80ff457c..180664a4 100644 --- a/docs/usage.md +++ b/docs/usage.md @@ -98,7 +98,7 @@ process { } ``` -The four `fusion-report` files: `cosmic.db`, `fusiongdb.db`, `fusiongdb2.db`, `mitelman.db` +The four `fusion-report` files: `cosmic.db`, `fusiongdb2.db`, `mitelman.db` should then be copied into the HPC `/references/fusion_report_db`. #### Note about fusioncatcher references diff --git a/modules/local/fusionreport/download/main.nf b/modules/local/fusionreport/download/main.nf index ac288ade..971db1b7 100644 --- a/modules/local/fusionreport/download/main.nf +++ b/modules/local/fusionreport/download/main.nf @@ -28,7 +28,6 @@ process FUSIONREPORT_DOWNLOAD { """ touch cosmic.db touch fusiongdb2.db - touch fusiongdb.db touch mitelman.db cat <<-END_VERSIONS > versions.yml "${task.process}":