ADD: wradlib notebooks (#76)

* ADD: wradlib notebook clutter and beamblockage, add hvplot/datashader for interactive plotting

* update wradlib notebook
* add bottleneck
* add rioxarray
* use bucket data
* try to minimize image size
* tag docker image
* use gpm-api>=0.2.15 within environment.yml, remove gpm-api install from appendix.txt

.github/workflows/build-book-pullrequest.yaml

@@ -28,7 +28,7 @@ permissions:
   contents: read
 
 env:
-  DOCKER_TAG: pr_77
+  DOCKER_TAG: pr_76
 
 jobs:
   build-book:
@@ -55,6 +55,21 @@ jobs:
           #   echo "binder-folder NOT changed - NO rebuild"
           # fi
           rm binder/Dockerfile
+      - name: Free Disk Space (Ubuntu)
+        uses: jlumbroso/free-disk-space@main
+        with:
+          # this might remove tools that are actually needed,
+          # if set to "true" but frees about 6 GB
+          tool-cache: false
+
+          # all of these default to true, but feel free to set to
+          # "false" if necessary for your workflow
+          android: true
+          dotnet: true
+          haskell: true
+          large-packages: false
+          docker-images: false
+          swap-storage: false
       - name: update jupyter dependencies with repo2docker
         uses: jupyterhub/repo2docker-action@master
         with:

.github/workflows/build-book.yaml

@@ -25,7 +25,7 @@ on:
         type: string  # had a lot of trouble with boolean types, see https://github.com/actions/runner/issues/1483
 
 env:
-  DOCKER_TAG: pr_77
+  DOCKER_TAG: pr_76
 
 jobs:
   build-container:

binder/Dockerfile

@@ -1 +1 @@
-FROM ghcr.io/openradar/erad2024:pr_77
+FROM ghcr.io/openradar/erad2024:pr_76

binder/appendix.txt

@@ -19,6 +19,5 @@ RUN CONDA_DIR=/srv/conda && \
     echo "export PROJ_NETWORK=$PROJ_NETWORK" >> ~/.profile && \
     ${CONDA_PREFIX}/bin/bash -l $BALTRAD_INSTALL_ROOT/install/baltrad/install_baltrad.sh && \
     rm -rf $BALTRAD_INSTALL_ROOT/install && \
-    ${MAMBA_EXE} install -y -n $RADARENV gpm-api --no-update-deps && \
     ${MAMBA_EXE} clean --all -f -y && \
     cp binder/kernel.json $CONDA_PREFIX/share/jupyter/kernels/python3/.

binder/environment.yml

@@ -8,6 +8,7 @@ dependencies:
   - sphinx-pythia-theme
   - arm_pyart>=1.18.7
   - cartopy
+  - gpm-api>=0.2.15
   - matplotlib
   - numpy
   - pyrad_arm
@@ -44,3 +45,9 @@ dependencies:
   - jaxopt
   - tensorflow>=2.6
   - tensorflow-probability>=0.24
+  # interactive plotting
+  - hvplot
+  - datashader
+  # needed for wradlib
+  - bottleneck
+  - rioxarray

myst.yml

@@ -64,6 +64,7 @@ project:
         - title: Py-ART and wradlib
           children:
             - file: notebooks/xradar-pyart/pyart-basics.ipynb
+            - file: notebooks/wradlib/wradlib_clutter_beamblockage.ipynb
         - title: BALTRAD
           children:
             - pattern: notebooks/baltrad/baltrad_short_course/*.ipynb