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    60 repositories

    • coldp

      Public
      Allows to process CoLDP files
      Go
      •0•0•0•0•Updated Feb 2, 2025Feb 2, 2025

    • gnidump

      Public
      Migrates MySQL data of previous version of GNI to PostgreSQL
      Go
      •
      MIT License
      •0•0•1•0•Updated Feb 2, 2025Feb 2, 2025

    • gnames

      Public
      gnames verifies scientic names with fuzzy matching and speeds of more than 1000 names a second.
      Go
      •
      MIT License
      •0•5•7•0•Updated Jan 31, 2025Jan 31, 2025

    • gnverifier

      Public
      GNverifier verifies scientific names against more than 100 biodiversity databases
      golangresolutionbioinformaticsreconciliationverificationbiodiversityscientific-namesgo
      Go
      •
      MIT License
      •1•21•13•0•Updated Jan 31, 2025Jan 31, 2025

    • dwca

      Public
      The DwCA library processes Darwin Core Archive files
      Go
      •
      MIT License
      •0•0•4•0•Updated Jan 30, 2025Jan 30, 2025

    • gnmatcher

      Public
      gnmatcher provides fast stemming, fuzzy matching altorithms for matching scientific names
      Go
      •
      MIT License
      •0•3•0•0•Updated Jan 29, 2025Jan 29, 2025

    • gnfmt

      Public
      format is a utility package, it contains format options, conversions to GoB, JSON, CSV
      Go
      •
      MIT License
      •0•1•0•0•Updated Jan 29, 2025Jan 29, 2025

    • gnlib

      Public
      Miscellaneous shared libraries for GNA projects
      Go
      •
      MIT License
      •0•1•0•0•Updated Jan 28, 2025Jan 28, 2025

    • gnfinder

      Public
      GNfinder finds scientific names in UTF8 texts, PDF files, MS Word/Excel documents, URLs etc.
      bioinformaticsbiodiversity-informaticsbiodiversity-heritage-library
      Go
      •
      MIT License
      •5•46•19•1•Updated Jan 6, 2025Jan 6, 2025

    • ds-ruhoff-mollusca

      Public
      Data-Source out of publication "Index to the species of Mollusca introduced from 1850 to 1870" Ruhoff, Florence A. 1980
      Ruby
      •0•0•0•0•Updated Dec 2, 2024Dec 2, 2024

    • bayes

      Public
      A simple implementation of Naive Bayesian classifier
      Go
      •
      MIT License
      •0•0•0•1•Updated Dec 2, 2024Dec 2, 2024

    • gner

      Public
      Global Named Entity Recognition
      Go
      •
      MIT License
      •0•0•0•0•Updated Dec 2, 2024Dec 2, 2024

    • bhlnames

      Public
      BHLnames finds nomenclatural events, adds taxonomic intelligence to Biodiversity Heritage Library
      Go
      •
      MIT License
      •0•3•3•0•Updated Dec 2, 2024Dec 2, 2024

    • gnparser

      Public
      GNparser normalises scientific names and extracts their semantic elements.
      bioinformaticsnomenclaturebiodiversityscientific-namesparser
      Go
      •
      MIT License
      •5•43•18•0•Updated Dec 2, 2024Dec 2, 2024

    • bhlquest

      Public
      BHLquest: a tool to ask questions about species using Biodiversity Heritage Library Corpus
      Go
      •
      MIT License
      •0•2•0•0•Updated Dec 2, 2024Dec 2, 2024

    • gnapi

      Public
      This project provides OpenAPI documenation for Global Names API services
      Go
      •
      MIT License
      •1•0•0•0•Updated Nov 13, 2024Nov 13, 2024

    • pygnparser

      Public
      A Python wrapper for GNparser
      Python
      •
      MIT License
      •0•0•1•0•Updated Nov 12, 2024Nov 12, 2024

    • homebrew-gn

      Public
      Ruby
      •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

    • aho_corasick

      Public
      Implementation of Aho-Corasick algorithm
      Go
      •
      MIT License
      •0•0•0•0•Updated Nov 11, 2024Nov 11, 2024

    • gnsys

      Public
      Helper package for file system operations
      Go
      •
      MIT License
      •0•0•0•0•Updated Oct 14, 2024Oct 14, 2024

    • bhlindex

      Public
      BHLindex is used by Biodiversity Heritage Library to create their scientific names index
      Go
      •
      MIT License
      •1•9•7•0•Updated May 24, 2024May 24, 2024

    • gndict

      Public
      gndict creates a scientific names dictionaries to be used in GNfinder
      Go
      •
      MIT License
      •0•0•0•0•Updated May 23, 2024May 23, 2024

    • bhlquest-chat

      Public
      Vue
      •0•0•0•0•Updated May 15, 2024May 15, 2024

    • papers

      Public
      Collection of papers about Global Names projects
      TeX
      •2•0•6•0•Updated Apr 18, 2024Apr 18, 2024

    • gncsv

      Public
      A fork of Go CSV library that allows to change field border character
      Go
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Feb 28, 2024Feb 28, 2024

    • ecoml

      Public
      A reader and writer of Ecological Metadata Language
      Go
      •0•0•0•0•Updated Feb 2, 2024Feb 2, 2024

    • gnbhl

      Public
      BHLitem is a helper tool used in other projects. It deals with BHL Item entities.
      Go
      •0•0•0•0•Updated Jan 18, 2024Jan 18, 2024

    • llmutil

      Public
      Useful NLM LLM utitilies served via RESTful inteface
      Python
      •0•0•0•0•Updated Dec 24, 2023Dec 24, 2023

    • gndiff

      Public
      GNdiff compares scientific names from two files
      Go
      •
      MIT License
      •1•6•8•0•Updated Nov 6, 2023Nov 6, 2023

    • gn2023

      Public
      A proposal to enhance name detection
      0•0•0•0•Updated Oct 30, 2023Oct 30, 2023