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Finally updated my R (sessionInfo() below) and just installed the dev version of taxize. I'm running some old code (circa 2021). It breaks on gnr_datasources() and returns this error:
> gnr_datasources()
Error: Service Unavailable (HTTP 503)
> sessionInfo()
R version 4.4.2 (2024-10-31)
Platform: aarch64-apple-darwin20
Running under: macOS Sequoia 15.2
Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.12.0
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
time zone: America/Los_Angeles
tzcode source: internal
attached base packages:
[1] stats graphics grDevices utils datasets methods
[7] base
other attached packages:
[1] taxize_0.9.102
loaded via a namespace (and not attached):
[1] digest_0.6.37 R6_2.5.1 codetools_0.2-20
[4] lattice_0.22-6 httpcode_0.3.0 crul_1.5.0
[7] zoo_1.8-12 iterators_1.0.14 parallel_4.4.2
[10] cli_3.6.3 xml2_1.3.6 foreach_1.5.2
[13] ape_5.8-1 grid_4.4.2 data.table_1.16.4
[16] compiler_4.4.2 rstudioapi_0.17.1 tools_4.4.2
[19] nlme_3.1-166 curl_6.0.1 Rcpp_1.0.13-1
[22] crayon_1.5.3 rlang_1.1.4 jsonlite_1.8.9
[25] bold_1.3.0 stringi_1.8.4
The text was updated successfully, but these errors were encountered:
Thanks for the report! The Global Names Verifier (GNR) API has not been maintianed for a few years now and it seems that it has been shut down, perhaps permantly. The replacement is Global Names Architecture (GNA). I have made an analogous function for that API called gna_data_sources and deprecated gnr_datasources in the next release of taxize.
Finally updated my R (
sessionInfo()
below) and just installed the dev version oftaxize
. I'm running some old code (circa 2021). It breaks ongnr_datasources()
and returns this error:The text was updated successfully, but these errors were encountered: