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DESCRIPTION
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Package: pophelper
Type: Package
Title: Tabulate, analyse and visualise admixture proportions from STRUCTURE, TESS, BAPS, ADMIXTURE and tab-delimited q-matrices
files
Version: 2.2.6
Date: 2018-05-02
Author: Roy Mathew Francis
Authors@R: person("Roy", "Francis", email = "roy.m.francis@outlook.com",role = c("aut", "cre"))
Maintainer: Roy Mathew Francis <roy.m.francis@outlook.com>
Description: A set of useful functions for processing admixture proportion files from the
population structure analysis softwares STRUCTURE, TESS, ADMIXTURE, BAPS, fastSTRUCTURE etc. The
package contains functions to read runs, tabulate runs, summarise runs, plot runs, estimate
K using Evanno method, export clumpp files, export distruct files and generate barplots.
URL: https://github.com/royfrancis/pophelper
Depends:
R(>= 3.4.0),
Cairo,
ggplot2
Imports:
grid,
gridExtra,
gtable,
tidyr
Suggests:
knitr,
testthat
License: GPL-3
Encoding: UTF-8
VignetteBuilder: knitr
RoxygenNote: 6.0.1