pytest_and_coverage.yml

name: Test and coverage

on: [push]

jobs:
  build:

    strategy:
      matrix:
        runs-on: [macos-latest, windows-latest, ubuntu-latest]
        python-version: [3.8, 3.9, '3.10', '3.11']
    runs-on: ${{ matrix.runs-on }}
    env:
        MPLBACKEND: Agg
        USE_COVERAGE: ${{ matrix.runs-on == 'ubuntu-latest' && matrix.python-version == '3.10' }}

    steps:
    - uses: actions/checkout@v4
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v4
      with:
        python-version: ${{ matrix.python-version }}
    - name: Setting up OpenMP for Linux
      if: matrix.runs-on == 'ubuntu-latest'
      run: |
        sudo apt-get update; sudo apt-get install -y libomp5 libomp-dev
    - name: Setting up OpenMP for MAC-OS
      if: matrix.runs-on == 'macos-latest'
      run: |
        brew update
        brew install libomp
    - name: Install dependencies
      run: |
        python3 -m pip install --upgrade pip
        python3 -m pip install -r ci_requirements.txt
        python3 -m pip install --upgrade -r ci_requirements.txt
    - name: Install module for coverage
      if: env.USE_COVERAGE == 'true'
      run: |
        export CYTHON_TRACE_NOGIL=1
        python3 setup.py build_ext --inplace --force --define CYTHON_TRACE_NOGIL
    - name: Install module
      if: env.USE_COVERAGE == 'false'
      run: |
        python3 -m pip install .
#  - name: Lint with flake8
#    run: |
#      pip install flake8
#      # stop the build if there are Python syntax errors or undefined names
#      flake8 ./compmech --count --select=E9,F63,F7,F82 --show-source --statistics
#      # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
#      flake8 ./compmech --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
    - name: Test with pytest and coverage report
      if: env.USE_COVERAGE == 'true'
      run: |
        coverage run -m pytest compmech
        coverage report
    - name: Test with pytest
      if: env.USE_COVERAGE == 'false'
      run: |
        pytest compmech
    - name: Upload coverage to Codecov
      if: env.USE_COVERAGE == 'true'
      uses: codecov/codecov-action@v3
      with:
        token: ${{ secrets.CODECOV_UPLOAD_TOKEN }} 
        fail_ci_if_error: true
        verbose: true