DESCRIPTION

Package: BulkRNAseq
Type: Package
Title: Tool-kit for bulk RNA sequencing data analysis
Version: 0.1.0
Authors@R: 
  c(person(given = "Shivang",
           family = "Sharma", 
           role = c("aut", "cre"), 
           email = "ssharm55@jhmi.edu", 
           comment = ), 
    person(given = "Eugene",
           family = "Shenderov", 
           role = c("aut", "ctb", "cph"), 
           email = "Eugene.Shenderov@jhmi.edu"))
Description: Tools for analyzing bulk RNA sequencing datafrom analyzing raw 
    fastq files to downstream analyses like differential gene expression and GSEA
URL: 
BugReports: 
Depends: 
    R (>= 4.3.0)
Imports: 
    rstudioapi
    AnnotationDbi
    annotables
    readxl
    writexl
    Matrix
    tidyverse
    data.table
    mltools
    RColorBrewer
    crayon
    ggplot2
    plotly
    ggrepel
    reshape2
    corrr
    FactoMineR
    ggcorrplot
    factorextra
    patchwork
    BiocParallel
    DESeq2
    BiocGenerics
    varhandle
Suggests: 
VignetteBuilder: knitr
RoxygenNote: 7.3.1
Roxygen: list(markdown = TRUE)
Config/testthat/edition: 
SystemRequirements: 
Collate: 
    rsem_to_rawcounts.R
    
License: MIT + file LICENSE | GPL (>= 3)
Encoding: UTF-8
LazyData: true