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Optionally fill-in on-target coverage info in janno #3

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TCLamnidis opened this issue May 3, 2022 · 0 comments
Open

Optionally fill-in on-target coverage info in janno #3

TCLamnidis opened this issue May 3, 2022 · 0 comments

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@TCLamnidis
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If a user has ran eager with the required configuration for on-target coverages to be calculated (namely --snpcapture_bed and `using bam_filtering at a chosen MapQ), then include this information in the populated janno table.
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@TCLamnidis