Skip to content
View omega-sz's full-sized avatar

Block or report omega-sz

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Stars

bio_pipeline

15 repositories

WDL Analysis Research Pipelines

WDL 209 101 Updated Feb 27, 2025

📚 Tools and databases for analyzing HLA and VDJ genes.

217 26 Updated Dec 10, 2024

T/B cell receptor sequencing analysis notes

228 34 Updated Dec 1, 2024

Examples of single-cell genomic analysis accelerated with RAPIDS

Jupyter Notebook 331 70 Updated Feb 14, 2023

BioCarta pathway images

R 11 Updated Oct 15, 2023

These are scripts for pan-cacner NK cells analyses.

R 67 13 Updated Aug 18, 2023
Python 10 1 Updated Aug 22, 2023

R client for the OmniPath web service

R 126 20 Updated Feb 25, 2025

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

Jupyter Notebook 572 69 Updated Feb 25, 2025

Materials and scripts for building cell type encyclopedia table

Python 19 3 Updated Jan 9, 2025

codes for article

R 14 3 Updated Jan 19, 2023
Jupyter Notebook 2 Updated Feb 16, 2024
Python 4 Updated Feb 21, 2025

CODEX data processing code

Python 12 4 Updated Jan 23, 2025

Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information

Python 4 5 Updated Aug 12, 2024