diff --git a/src/Apps/HeidiSqlApp.php b/src/Apps/HeidiSqlApp.php
index abb2d05..1e73530 100644
--- a/src/Apps/HeidiSqlApp.php
+++ b/src/Apps/HeidiSqlApp.php
@@ -6,6 +6,7 @@
  * Open Site database in HeidiSQL
  */
 class HeidiSqlApp extends PancakesApp {
+
   /**
    * {@inheritdoc}
    */
diff --git a/src/Apps/MySQLApp.php b/src/Apps/MySQLApp.php
index 7d873b0..fae06d4 100644
--- a/src/Apps/MySQLApp.php
+++ b/src/Apps/MySQLApp.php
@@ -6,6 +6,7 @@
  * Open Site database in MySQL CLI
  */
 class MySQLApp extends PancakesApp {
+  
   /**
    * {@inheritdoc}
    */
@@ -17,12 +18,12 @@ class MySQLApp extends PancakesApp {
   public $app = 'MySQL';
 
   /**
-   * - App Location Candinates
+   * App Location
    */
   public $app_location;
 
   public function open(){
-    $cmd = join(' ', [
+    $cmd = implode(' ', [
       'mysql',
       '-h ' . $this->escapeShellArg($this->connection_info['mysql_host']),
       '-P ' . $this->escapeShellArg($this->connection_info['mysql_port']),
@@ -54,4 +55,14 @@ public function validate() {
     $this->app_location = 'mysql';
     return $this->which($this->app_location);
   }
+
+  /**
+   * Priority for mysql cli should be last.
+   *
+   * @return int
+   */
+  public function weight() {
+    return 100;
+  }
+
 }
diff --git a/src/Apps/MySQLWorkbenchApp.php b/src/Apps/MySQLWorkbenchApp.php
index e12cc33..c8c40de 100644
--- a/src/Apps/MySQLWorkbenchApp.php
+++ b/src/Apps/MySQLWorkbenchApp.php
@@ -33,7 +33,7 @@ class MySQLWorkbenchApp extends PancakesApp {
    * @return bool
    */
   public function validate() {
-    /* @TODO: Terminus now has Utils for this, wait until most people are using it and switch it */
+    /* @TODO: Terminus now has Utils for this. */
     switch (php_uname('s')) {
       case 'Darwin':
         $this->app_location = '/Applications/MySQLWorkbench.app/Contents/MacOS/MySQLWorkbench';
@@ -157,4 +157,5 @@ protected function writeXML($file, $xml, $sftp_host) {
       fclose($handle);
     }
   }
+
 }
diff --git a/src/Apps/PancakesApp.php b/src/Apps/PancakesApp.php
index c3ec631..63c50da 100644
--- a/src/Apps/PancakesApp.php
+++ b/src/Apps/PancakesApp.php
@@ -2,39 +2,52 @@
 
 namespace Pantheon\TerminusPancakes\Apps;
 
+use Pantheon\TerminusPancakes\Commands\PancakesCommand;
+use Psr\Log\LoggerInterface;
+
 /**
  * Interface PancakesApp
+ *
  * @package Pantheon\TerminusPancakes\Apps
  */
 class PancakesApp {
 
   /**
+   * Connection Info Array
+   *
    * @var array
    */
   protected $connection_info;
 
   /**
-   * @var
+   * @var LoggerInterface
    */
   protected $logger;
 
   /**
-   * @var \Pantheon\TerminusPancakes\Commands\PancakesCommand
+   * @var PancakesCommand
    */
   protected $command;
 
   /**
-   * {@inheritdoc}
+   * Main app name.
+   *
+   * @var string
    */
-  public $aliases = [];
+  public $app = '';
 
   /**
-   * {@inheritdoc}
+   * Array of aliases for the pancakes app.
+   *
+   * @var string[]
    */
-  public $app = '';
+  public $aliases = [];
 
   /**
    * PancakesApp constructor.
+   *
+   * @param $connection_info
+   * @param $logger
    */
   public function __construct($connection_info, $logger){
     $this->connection_info = $connection_info;
@@ -49,12 +62,16 @@ public function __toString() {
   }
 
   /**
+   * Open the app with the connection info.
+   *
    * @return void
    */
   public function open(){}
 
   /**
-   * @return void
+   * Validates if the app can be used.
+   *
+   * @return bool
    */
   public function validate(){}
 
@@ -74,7 +91,7 @@ public function isWindows(){
   protected function flag($name) {
     // I was very tempted to use str_pad....
     // return str_pad($name, strlen($name) + 1 + !Utils\isWindows(), '-', STR_PAD_LEFT);
-    return ($this->isWindows() ? "-" : "--") . $name;
+    return ($this->isWindows() ? '-' : '--') . $name;
   }
 
   /**
@@ -144,11 +161,12 @@ protected function escapeShellArg($arg, $raw = FALSE) {
   /**
    * Execute Command
    * @param $command
-   * @param $arguments
-   * @return bool True if command executes without an error
+   * @param array|string $arguments
+   * @return bool true
+   *    If command executes without an error
    */
-  protected function execCommand($command, $arguments = array()) {
-    $arguments = is_array($arguments) ? $arguments : [$arguments];
+  protected function execCommand($command, $arguments = '') {
+    $arguments = is_array($arguments) ? $arguments : (array) $arguments;
 
     if (!empty($arguments)) {
       $command .= ' ' . implode(' ', $arguments);
@@ -168,9 +186,19 @@ protected function writeFile($data, $suffix = NULL) {
     $tempfile = tempnam(sys_get_temp_dir(), 'terminus-pancakes');
     $tempfile .= !empty($suffix) ? ('.' . $suffix) : '';
 
-    $handle = fopen($tempfile, "w");
+    $handle = fopen($tempfile, 'w');
     fwrite($handle, $data);
     fclose($handle);
     return $tempfile;
   }
+
+  /**
+   * Gets the weight of the pancakes app.
+   *
+   * @return int
+   */
+  public function weight() {
+    return 0;
+  }
+
 }
\ No newline at end of file
diff --git a/src/Apps/SequelProApp.php b/src/Apps/SequelProApp.php
index 7192464..4619662 100644
--- a/src/Apps/SequelProApp.php
+++ b/src/Apps/SequelProApp.php
@@ -6,6 +6,7 @@
  * Open Site database in SequelPro
  */
 class SequelProApp extends PancakesApp {
+
   /**
    * {@inheritdoc}
    */
@@ -29,7 +30,7 @@ public function open() {
    * Validates the app can be used
    */
   public function validate() {
-    return php_uname('s') == 'Darwin';
+    return php_uname('s') === 'Darwin';
   }
 
   /**
diff --git a/src/Commands/PancakesCommand.php b/src/Commands/PancakesCommand.php
index 2ef7ee3..0204357 100644
--- a/src/Commands/PancakesCommand.php
+++ b/src/Commands/PancakesCommand.php
@@ -5,8 +5,12 @@
 use Pantheon\Terminus\Commands\TerminusCommand;
 use Pantheon\Terminus\Site\SiteAwareInterface;
 use Pantheon\Terminus\Site\SiteAwareTrait;
-use Pantheon\Terminus\Collections\Sites;
 use Pantheon\Terminus\Exceptions\TerminusException;
+use Pantheon\Terminus\Models\Environment;
+use Pantheon\Terminus\Models\Site;
+use Pantheon\TerminusPancakes\Apps\PancakesApp;
+
+include __DIR__ . DIRECTORY_SEPARATOR . '../..' . DIRECTORY_SEPARATOR . 'vendor/autoload.php';
 
 /**
  * Open Site database in your favorite MySQL Editor
@@ -17,7 +21,7 @@ class PancakesCommand extends TerminusCommand Implements SiteAwareInterface {
   use SiteAwareTrait;
 
   /**
-   * @var
+   * @var array
    */
   private $connection_info;
 
@@ -33,8 +37,12 @@ class PancakesCommand extends TerminusCommand Implements SiteAwareInterface {
    * @option string $app Application to Open (optional)
    *
    * @usage terminus site:pancakes <site>.<env> <app>
+   *
+   * @throws TerminusException
    */
-  public function pancakes($site_env, $options = ['app' => NULL]) {
+  public function pancakes($site_env, array $options = ['app' => NULL]) {
+    /* @var $env Environment */
+    /* @var $site Site */
     list($site, $env) = $this->getSiteEnv($site_env);
     $env->wake();
 
@@ -52,7 +60,7 @@ public function pancakes($site_env, $options = ['app' => NULL]) {
     }
     $this->connection_info['sftp_port'] = $sftp_port;
 
-    $candidate_instances = $this->getCandinatePlugins();
+    $candidate_instances = $this->getCandidatePlugins();
 
     $instance = NULL;
 
@@ -118,43 +126,34 @@ public function pancakes($site_env, $options = ['app' => NULL]) {
   }
 
   /**
-   * Gets Candinate Classes that are Loaded
+   * Gets Candidate Classes that are Loaded
+   *
    * @return array
    */
-  private function getCandinatePlugins() {
-    // Find our Children!
-    $classes = get_declared_classes();
-    $candidate_instances = [];
-
-    foreach ($classes as $class) {
-      $reflection = new \ReflectionClass($class);
-      if ($reflection->isSubclassOf('Pantheon\TerminusPancakes\Apps\PancakesApp')) {
-        $candidate_instance = $reflection->newInstanceArgs([
-          $this->connection_info,
-          $this->log()
-        ]);
+  private function getCandidatePlugins() {
+    $iterator = new \DirectoryIterator(__DIR__ . '/../Apps');
 
-        if (method_exists($candidate_instance, 'validate')) {
-          if (!$candidate_instance->validate()) {
-            continue;
-          }
-        }
+    // Autoload plugins
+    foreach ($iterator as $file) {
+      $plugin = 'Pantheon\TerminusPancakes\Apps\\' . $file->getBasename('.php');
 
-        $candidate_instances[] = $candidate_instance;
+      // Don't load PancakesApp since that's the base plugin.
+      if (PancakesApp::class === $plugin || !$file->isFile()) {
+        continue;
       }
-    }
 
-    return $candidate_instances;
-  }
-}
+      /* @var $candidate_instance PancakesApp */
+      $candidate_instance = new $plugin($this->connection_info, $this->log());
 
-// Force PancakesApp to be first.
-require_once dirname(__FILE__) . '/../Apps/PancakesApp.php';
+      if (!$candidate_instance->validate()) {
+        continue;
+      }
 
-// Include Sub-Commands - Terminus uses DirectoryIterator so we need to have better control over the order.
-$iterator = new \DirectoryIterator(dirname(__FILE__) . '/../Apps');
-foreach ($iterator as $file) {
-  if ($file->isFile()) {
-    include_once $file->getPathname();
+      $candidate_instances[$candidate_instance->weight()] = $candidate_instance;
+    }
+
+    ksort($candidate_instances);
+
+    return $candidate_instances;
   }
 }
\ No newline at end of file