tissue is a model repository in a single python package for the manuscript Fischer, D. S., Ali, M., Richter, S., Etrürk, A. and Theis, F. "Graph neural networks learn emergent tissue properties from spatial molecular profiles."
The package can be installed by cloning the repository and running,
pip install -e .
and to install the Dataloaders used in this package,
pip install https://github.com/theislab/ncem/archive/supervised_dataloading_buffer.zip