From 5d8efd3f16644c6c6c4ab0165292f5e4725da097 Mon Sep 17 00:00:00 2001 From: WassimG Date: Thu, 10 Oct 2024 17:14:52 +0000 Subject: [PATCH] add proteins to base_columns --- .cookietemple.yml | 2 +- .github/release-drafter.yml | 4 ++-- cookietemple.cfg | 2 +- docs/conf.py | 4 ++-- pyproject.toml | 2 +- spectrum_fundamentals/__init__.py | 2 +- spectrum_fundamentals/__main__.py | 2 +- spectrum_fundamentals/metrics/percolator.py | 1 + 8 files changed, 10 insertions(+), 9 deletions(-) diff --git a/.cookietemple.yml b/.cookietemple.yml index d9b8bef..7459a05 100644 --- a/.cookietemple.yml +++ b/.cookietemple.yml @@ -15,5 +15,5 @@ full_name: Victor Giurcoiu email: victor.giurcoiu@tum.de project_name: spectrum_fundamentals project_short_description: Fundamentals public repo -version: 0.7.6 +version: 0.7.7 license: MIT diff --git a/.github/release-drafter.yml b/.github/release-drafter.yml index 5cd19ed..806aea3 100644 --- a/.github/release-drafter.yml +++ b/.github/release-drafter.yml @@ -1,5 +1,5 @@ -name-template: "0.7.6 " # <> -tag-template: 0.7.6 # <> +name-template: "0.7.7 " # <> +tag-template: 0.7.7 # <> exclude-labels: - "skip-changelog" diff --git a/cookietemple.cfg b/cookietemple.cfg index 2bc4adc..4fdf161 100644 --- a/cookietemple.cfg +++ b/cookietemple.cfg @@ -1,5 +1,5 @@ [bumpversion] -current_version = 0.7.6 +current_version = 0.7.7 [bumpversion_files_whitelisted] init_file = spectrum_fundamentals/__init__.py diff --git a/docs/conf.py b/docs/conf.py index cb18bb7..2b90c61 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -52,9 +52,9 @@ # the built documents. # # The short X.Y version. -version = "0.7.6" +version = "0.7.7" # The full version, including alpha/beta/rc tags. -release = "0.7.6" +release = "0.7.7" # The language for content autogenerated by Sphinx. Refer to documentation # for a list of supported languages. diff --git a/pyproject.toml b/pyproject.toml index 7cc1dbe..6c8ef0a 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "spectrum_fundamentals" -version = "0.7.6" # <> +version = "0.7.7" # <> description = "Fundamental functions, annotation pipeline and constants for oktoberfest" authors = ["Wilhelmlab at Technical University of Munich"] license = "MIT" diff --git a/spectrum_fundamentals/__init__.py b/spectrum_fundamentals/__init__.py index 76cdc86..1b67d97 100644 --- a/spectrum_fundamentals/__init__.py +++ b/spectrum_fundamentals/__init__.py @@ -5,7 +5,7 @@ __author__ = """The Oktoberfest development team (Wilhelmlab at Technical University of Munich)""" __copyright__ = f"Copyright {datetime.now():%Y}, Wilhelmlab at Technical University of Munich" __license__ = "MIT" -__version__ = "0.7.6" +__version__ = "0.7.7" import logging import logging.handlers diff --git a/spectrum_fundamentals/__main__.py b/spectrum_fundamentals/__main__.py index 6fade5c..31fea9c 100644 --- a/spectrum_fundamentals/__main__.py +++ b/spectrum_fundamentals/__main__.py @@ -5,7 +5,7 @@ @click.command() -@click.version_option(version="0.7.6", message=click.style("spectrum_fundamentals Version: 0.7.6")) +@click.version_option(version="0.7.7", message=click.style("spectrum_fundamentals Version: 0.7.7")) def main() -> None: """spectrum_fundamentals.""" diff --git a/spectrum_fundamentals/metrics/percolator.py b/spectrum_fundamentals/metrics/percolator.py index a6b8075..17434d9 100644 --- a/spectrum_fundamentals/metrics/percolator.py +++ b/spectrum_fundamentals/metrics/percolator.py @@ -94,6 +94,7 @@ def __init__( "mass_analyzer", "mz_range", "collision_energy", + "proteins", ] super().__init__(pred_intensities, true_intensities, mz)