cellpose_train_pred_loop.sh

#!/bin/bash

# run this script under images/
# rm nohup0.out; nohup bash ../../cellpose_train_pred_loop.sh 0 > nohup0.out &
# rm nohup1.out; nohup bash ../../cellpose_train_pred_loop.sh 1 > nohup1.out &
# rm nohup2.out; nohup bash ../../cellpose_train_pred_loop.sh 2 > nohup2.out &
# note that csi.txt and bias.txt thus generated do not have header

seed=$1

# None and i=0 will generate error, that is okay, it is as it should be
for pretrained in cyto cyto2 tissuenet livecell None; do
echo $pretrained
for i in {7..7}; do
    echo "Working on training$i"
    cd ../training$i
    bash ../../cellpose_train_pred.sh  $seed $pretrained
    sleep 5
    # sleep so that not all processes will try to write to csi.txt at the same time 
done
done


# Do the following after all seeds returned 

#for pretrained in cyto cyto2 tissuenet livecell None; do
#for i in {0..7}; do
#    mv training$i/csi_$pretrained.txt ../APresults/csi_cp_$pretrained\_$i.txt    
#    mv training$i/bias_$pretrained.txt ../APresults/bias_cp_$pretrained\_$i.txt    
#    
##    rm training$i/csi_$pretrained.txt
##    rm training$i/bias_$pretrained.txt
#done
#done