roll back yml

8Ginette8 · Jun 15, 2024 · 144148e · 144148e
1 parent f2bfb65
commit 144148e
Showing 1 changed file with 61 additions and 28 deletions.
diff --git a/.github/workflows/R-CMD-check-cache_month.yml b/.github/workflows/R-CMD-check-cache_month.yml
@@ -7,6 +7,7 @@ on:
     branches: [main]
 
 jobs:
+
   # Job for Ubuntu
   R-CMD-check-ubuntu:
     runs-on: ubuntu-latest
@@ -18,27 +19,11 @@ jobs:
     - name: Set up R
       uses: r-lib/actions/setup-r@v2
 
-    - name: Cache system dependencies
-      uses: actions/cache@v3
-      with:
-        path: /usr/local
-        key: ${{ runner.os }}-sysdeps-${{ hashFiles('**/DESCRIPTION') }}-${{ hashFiles('**/renv.lock') }}
-        restore-keys: |
-          ${{ runner.os }}-sysdeps-
-
     - name: Install system dependencies
       run: |
-        sudo apt-get update && sudo apt-get install -y \
-        libudunits2-dev \
-        libgdal-dev \
-        libgeos-dev \
-        libproj-dev \
-        texlive \
-        texlive-latex-extra \
-        texlive-fonts-recommended \
-        texlive-fonts-extra \
-        texinfo \
-        ghostscript
+        sudo apt-get update
+        sudo apt-get install -y libudunits2-dev libgdal-dev libgeos-dev libproj-dev
+        sudo apt-get install -y texlive texlive-latex-extra texlive-fonts-recommended texlive-fonts-extra texinfo ghostscript
 
     - name: Determine Cache Key
       id: cache-key
@@ -49,7 +34,7 @@ jobs:
       uses: actions/cache@v2
       with:
         path: ~/.R/library
-        key: ${{ runner.os }}-renv-${{ hashFiles('**/DESCRIPTION') }}-${{ env.CACHE_KEY }}
+        key: ${{ runner.os }}-${{ env.CACHE_KEY }}-${{ hashFiles('**/DESCRIPTION') }}
         restore-keys: |
           ${{ runner.os }}-renv-
 
@@ -64,17 +49,65 @@ jobs:
         R CMD build .
         R CMD check *tar.gz
 
-    - name: Display installation log on failure
-      if: failure()
-      run: cat gbif.range.Rcheck/00install.out
-
-    - name: Display check log on failure
-      if: failure()
-      run: cat gbif.range.Rcheck/00check.log
-
     - name: Upload check results
       if: always()
       uses: actions/upload-artifact@v2
       with:
         name: R-CMD-check-results
         path: check/*.Rcheck
+  # 
+  # # Job for macOS
+  # R-CMD-check-macos:
+  #   runs-on: macos-latest
+  # 
+  #   steps:
+  #   - name: Checkout repository
+  #     uses: actions/checkout@v2
+  # 
+  #   - name: Set up R
+  #     uses: r-lib/actions/setup-r@v2
+  # 
+  #   - name: Install system dependencies
+  #     run: |
+  #       brew install udunits gdal geos proj
+  #       brew install --cask mactex-no-gui
+  # 
+  #   - name: Add LaTeX to PATH
+  #     run: |
+  #       echo "/Library/TeX/texbin" >> $GITHUB_PATH
+  # 
+  #   - name: Update tlmgr and install LaTeX packages
+  #     run: |
+  #       tlmgr update --self
+  #       tlmgr install inconsolata helvetic times courier
+  # 
+  #   - name: Determine Cache Key
+  #     id: cache-key
+  #     run: |
+  #       echo "CACHE_KEY=renv-$(date +%Y-%m)" >> $GITHUB_ENV
+  # 
+  #   - name: Cache R packages
+  #     uses: actions/cache@v2
+  #     with:
+  #       path: ~/.R/library
+  #       key: ${{ runner.os }}-${{ env.CACHE_KEY }}-${{ hashFiles('**/DESCRIPTION') }}
+  #       restore-keys: |
+  #         ${{ runner.os }}-renv-
+  # 
+  #   - name: Install R packages
+  #     run: |
+  #       R -e 'install.packages("devtools")'
+  #       R -e 'install.packages("remotes")'
+  #       R -e 'remotes::install_cran(c("terra", "sf", "rgbif", "CoordinateCleaner", "ClusterR", "FNN", "geometry", "cluster", "rnaturalearth", "mclust", "methods"))'
+  # 
+  #   - name: Check package
+  #     run: |
+  #       R CMD build .
+  #       R CMD check *tar.gz
+  # 
+  #   - name: Upload check results
+  #     if: always()
+  #     uses: actions/upload-artifact@v2
+  #     with:
+  #       name: R-CMD-check-results
+  #       path: check/*.Rcheck