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Merge pull request #735 from ANTsX/reg_usage_doc
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DOC: explain reg transform options
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@cookpa
cookpa authored Nov 15, 2024
2 parents afc7228 + bb339d2 commit aa67254
Showing 1 changed file with 12 additions and 3 deletions.
15 changes: 12 additions & 3 deletions ants/registration/registration.py
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Original file line number Diff line number Diff line change
Expand Up @@ -211,9 +211,18 @@ def registration(
- "TVMSQ": time-varying diffeomorphism with mean square metric
- "TVMSQC": time-varying diffeomorphism with mean square metric for very large deformation
- "antsRegistrationSyN[x]": recreation of the antsRegistrationSyN.sh script in ANTs
where 'x' is one of the transforms available (e.g., 't', 'b', 's')
- "antsRegistrationSyNQuick[x]": recreation of the antsRegistrationSyNQuick.sh script in ANTs
where 'x' is one of the transforms available (e.g., 't', 'b', 's')
where 'x' is one of the transforms available:
t: translation (1 stage)
r: rigid (1 stage)
a: rigid + affine (2 stages)
s: rigid + affine + deformable syn (3 stages)
sr: rigid + deformable syn (2 stages)
so: deformable syn only (1 stage)
b: rigid + affine + deformable b-spline syn (3 stages)
br: rigid + deformable b-spline syn (2 stages)
bo: deformable b-spline syn only (1 stage)
- "antsRegistrationSyNQuick[x]": recreation of the antsRegistrationSyNQuick.sh script in ANTs.
x options as above.
- "antsRegistrationSyNRepro[x]": reproducible registration. x options as above.
- "antsRegistrationSyNQuickRepro[x]": quick reproducible registration. x options as above.
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